RNA–Protein interactions for RNA: ENST00000534946.5

LMO3-211, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-211ENST00000534946 CDC42BPGQ6DT37 1551 aa16.74■□□□□ 0.27
LMO3-211ENST00000534946 TMEM132EQ6IEE7 984 aa16.73■□□□□ 0.27
LMO3-211ENST00000534946 UBAP1LF5GYI3 381 aa16.72■□□□□ 0.27
LMO3-211ENST00000534946 CADPS2Q86UW7 1296 aa16.72■□□□□ 0.27
LMO3-211ENST00000534946 C19orf44Q9H6X5 657 aa16.72■□□□□ 0.27
LMO3-211ENST00000534946 ARHGEF28Q8N1W1 1705 aaKnown RBP16.72■□□□□ 0.27
LMO3-211ENST00000534946 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.72■□□□□ 0.27
LMO3-211ENST00000534946 STK26Q9P289 416 aa16.71■□□□□ 0.27
LMO3-211ENST00000534946 ROCK2O75116 1388 aaKnown RBP16.71■□□□□ 0.27
LMO3-211ENST00000534946 GPRASP1Q5JY77 1395 aa16.71■□□□□ 0.27
LMO3-211ENST00000534946 ADGRB2O60241 1585 aa16.7■□□□□ 0.26
LMO3-211ENST00000534946 EIF3AQ14152 1382 aaKnown RBP16.7■□□□□ 0.26
LMO3-211ENST00000534946 RNF216Q9NWF9 866 aaPredicted RBP16.7■□□□□ 0.26
LMO3-211ENST00000534946 ATF3P18847 181 aa16.69■□□□□ 0.26
LMO3-211ENST00000534946 POGKQ9P215 609 aa16.66■□□□□ 0.26
LMO3-211ENST00000534946 RBM33Q96EV2 1170 aaKnown RBP16.65■□□□□ 0.26
LMO3-211ENST00000534946 PRAM1Q96QH2 718 aa16.65■□□□□ 0.26
LMO3-211ENST00000534946 TRAK1Q9UPV9 953 aa16.65■□□□□ 0.26
LMO3-211ENST00000534946 PLEKHH1Q9ULM0 1364 aa16.64■□□□□ 0.25
LMO3-211ENST00000534946 MST1RQ04912 1400 aa16.63■□□□□ 0.25
LMO3-211ENST00000534946 NBPF1Q3BBV0 1214 aa16.63■□□□□ 0.25
LMO3-211ENST00000534946 NBPF8Q3BBV2 869 aa16.63■□□□□ 0.25
LMO3-211ENST00000534946 FMN2Q9NZ56 1722 aa16.62■□□□□ 0.25
LMO3-211ENST00000534946 WAPLQ7Z5K2 1190 aa16.62■□□□□ 0.25
LMO3-211ENST00000534946 ROBO1Q9Y6N7 1651 aa16.62■□□□□ 0.25
LMO3-211ENST00000534946 CARD11Q9BXL7 1154 aa16.61■□□□□ 0.25
LMO3-211ENST00000534946 SLAIN2Q9P270 581 aa16.61■□□□□ 0.25
LMO3-211ENST00000534946 QRICH2Q9H0J4 1663 aa16.61■□□□□ 0.25
LMO3-211ENST00000534946 CENPJQ9HC77 1338 aaPredicted RBP16.61■□□□□ 0.25
LMO3-211ENST00000534946 ANKARQ7Z5J8 1434 aa16.61■□□□□ 0.25
LMO3-211ENST00000534946 SLC24A1O60721 1099 aa16.6■□□□□ 0.25
LMO3-211ENST00000534946 PIP4K2BP78356 416 aa16.6■□□□□ 0.25
LMO3-211ENST00000534946 C1orf167Q5SNV9 1468 aa16.6■□□□□ 0.25
LMO3-211ENST00000534946 RTN4Q9NQC3 1192 aaKnown RBP16.59■□□□□ 0.25
LMO3-211ENST00000534946 SBNO2Q9Y2G9 1366 aa16.59■□□□□ 0.25
LMO3-211ENST00000534946 TULP4Q9NRJ4 1543 aa16.59■□□□□ 0.25
LMO3-211ENST00000534946 KIF1AQ12756 1690 aa16.58■□□□□ 0.24
LMO3-211ENST00000534946 AHDC1Q5TGY3 1603 aaPredicted RBP16.57■□□□□ 0.24
LMO3-211ENST00000534946 SAFB2Q14151 953 aaKnown RBP eCLIP16.56■□□□□ 0.24
LMO3-211ENST00000534946 MINK1Q8N4C8 1332 aaPredicted RBP16.55■□□□□ 0.24
LMO3-211ENST00000534946 ILDR1Q86SU0 546 aaPredicted RBP16.55■□□□□ 0.24
LMO3-211ENST00000534946 ITSN1Q15811 1721 aa16.55■□□□□ 0.24
LMO3-211ENST00000534946 NHSL1Q5SYE7 1610 aa16.55■□□□□ 0.24
LMO3-211ENST00000534946 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
LMO3-211ENST00000534946 BRINP3Q76B58 766 aa16.53■□□□□ 0.24
LMO3-211ENST00000534946 USP47Q96K76 1375 aa16.52■□□□□ 0.24
LMO3-211ENST00000534946 WASLO00401 505 aaPredicted RBP16.52■□□□□ 0.24
LMO3-211ENST00000534946 PHLPP1O60346 1717 aa16.51■□□□□ 0.23
LMO3-211ENST00000534946 ATP7BP35670 1465 aa16.51■□□□□ 0.23
LMO3-211ENST00000534946 EVC2Q86UK5 1308 aa16.5■□□□□ 0.23
LMO3-211ENST00000534946 USP32Q8NFA0 1604 aa16.5■□□□□ 0.23
LMO3-211ENST00000534946 HIRIP3Q9BW71 556 aaPredicted RBP16.5■□□□□ 0.23
LMO3-211ENST00000534946 TOPAZ1Q8N9V7 1692 aa16.5■□□□□ 0.23
LMO3-211ENST00000534946 COL16A1Q07092 1604 aaPredicted RBP16.49■□□□□ 0.23
LMO3-211ENST00000534946 NPHP3Q7Z494 1330 aa16.48■□□□□ 0.23
LMO3-211ENST00000534946 ESCO1Q5FWF5 840 aa16.47■□□□□ 0.23
LMO3-211ENST00000534946 HSPA1LP34931 641 aa16.46■□□□□ 0.23
LMO3-211ENST00000534946 ATAD2Q6PL18 1390 aa16.46■□□□□ 0.23
LMO3-211ENST00000534946 SRPK2P78362 688 aaKnown RBP16.45■□□□□ 0.22
LMO3-211ENST00000534946 CDK19Q9BWU1 502 aa16.45■□□□□ 0.22
LMO3-211ENST00000534946 NUTM2FA1L443 756 aa16.44■□□□□ 0.22
LMO3-211ENST00000534946 ORAI2Q96SN7 254 aa16.44■□□□□ 0.22
LMO3-211ENST00000534946 PHF8Q9UPP1 1060 aa16.44■□□□□ 0.22
LMO3-211ENST00000534946 SHPRHQ149N8 1683 aa16.43■□□□□ 0.22
LMO3-211ENST00000534946 PXDNQ92626 1479 aa16.43■□□□□ 0.22
LMO3-211ENST00000534946 JCADQ9P266 1359 aa16.43■□□□□ 0.22
LMO3-211ENST00000534946 NUDT16Q96DE0 195 aaKnown RBP16.43■□□□□ 0.22
LMO3-211ENST00000534946 PUS7Q96PZ0 661 aaKnown RBP16.43■□□□□ 0.22
LMO3-211ENST00000534946 RGPD8O14715 1765 aaPredicted RBP16.43■□□□□ 0.22
LMO3-211ENST00000534946 PRR36Q9H6K5 1346 aa16.43■□□□□ 0.22
LMO3-211ENST00000534946 ST20-MTHFSA0A0A6YYL1 179 aa16.42■□□□□ 0.22
LMO3-211ENST00000534946 EIF4G2P78344 907 aaKnown RBP eCLIP16.42■□□□□ 0.22
LMO3-211ENST00000534946 CCDC61Q9Y6R9 512 aa16.42■□□□□ 0.22
LMO3-211ENST00000534946 SOS2Q07890 1332 aaPredicted RBP16.42■□□□□ 0.22
LMO3-211ENST00000534946 NINLQ9Y2I6 1382 aa16.41■□□□□ 0.22
LMO3-211ENST00000534946 CDCA8Q53HL2 280 aa16.41■□□□□ 0.22
LMO3-211ENST00000534946 PPIP5K1Q6PFW1 1433 aa16.41■□□□□ 0.22
LMO3-211ENST00000534946 TMF1P82094 1093 aa16.4■□□□□ 0.22
LMO3-211ENST00000534946 LRRC59Q96AG4 307 aaKnown RBP16.4■□□□□ 0.22
LMO3-211ENST00000534946 TESK2Q96S53 571 aa16.4■□□□□ 0.22
LMO3-211ENST00000534946 POLR3AO14802 1390 aaPredicted RBP16.39■□□□□ 0.21
LMO3-211ENST00000534946 BRD4O60885 1362 aaPredicted RBP16.39■□□□□ 0.21
LMO3-211ENST00000534946 SLC4A2P04920 1241 aa16.39■□□□□ 0.21
LMO3-211ENST00000534946 PSME1Q06323 249 aa16.39■□□□□ 0.21
LMO3-211ENST00000534946 SBNO1A3KN83 1393 aa16.38■□□□□ 0.21
LMO3-211ENST00000534946 TNS3Q68CZ2 1445 aa16.38■□□□□ 0.21
LMO3-211ENST00000534946 FOXO3O43524 673 aa16.38■□□□□ 0.21
LMO3-211ENST00000534946 CABP2Q9NPB3 220 aa16.38■□□□□ 0.21
LMO3-211ENST00000534946 PLEKHG3A1L390 1219 aa16.37■□□□□ 0.21
LMO3-211ENST00000534946 NGDNQ8NEJ9 315 aaKnown RBP16.37■□□□□ 0.21
LMO3-211ENST00000534946 SPATA31A6Q5VVP1 1343 aa16.37■□□□□ 0.21
LMO3-211ENST00000534946 COL22A1Q8NFW1 1626 aaPredicted RBP16.37■□□□□ 0.21
LMO3-211ENST00000534946 ARHGEF10O15013 1369 aa16.37■□□□□ 0.21
LMO3-211ENST00000534946 HOXD11P31277 338 aaPredicted RBP16.36■□□□□ 0.21
LMO3-211ENST00000534946 ZEB1P37275 1124 aaPredicted RBP16.36■□□□□ 0.21
LMO3-211ENST00000534946 PMFBP1Q8TBY8 1022 aa16.35■□□□□ 0.21
LMO3-211ENST00000534946 TRPM3Q9HCF6 1732 aaPredicted RBP16.35■□□□□ 0.21
LMO3-211ENST00000534946 PNPLA6Q8IY17 1366 aa16.35■□□□□ 0.21
LMO3-211ENST00000534946 KRT28Q7Z3Y7 464 aa16.34■□□□□ 0.21
LMO3-211ENST00000534946 DISP3Q9P2K9 1392 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms