RNA–Protein interactions for RNA: ENST00000534290.1

NCAPD3-212, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 352 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-212ENST00000534290 SPHKAPQ2M3C7 1700 aa15.08■□□□□ 0
NCAPD3-212ENST00000534290 C1orf167Q5SNV9 1468 aa15.07■□□□□ 0
NCAPD3-212ENST00000534290 NHSL1Q5SYE7 1610 aa15.06■□□□□ 0
NCAPD3-212ENST00000534290 SOS2Q07890 1332 aaPredicted RBP15.06■□□□□ 0
NCAPD3-212ENST00000534290 NEXMIFQ5QGS0 1516 aa15.06■□□□□ 0
NCAPD3-212ENST00000534290 ROBO2Q9HCK4 1378 aa15.05■□□□□ -0
NCAPD3-212ENST00000534290 RPGRIP1LQ68CZ1 1315 aa15.04■□□□□ -0
NCAPD3-212ENST00000534290 USP21Q9UK80 565 aa15.04■□□□□ -0
NCAPD3-212ENST00000534290 CLTCL1P53675 1640 aa15.03■□□□□ -0
NCAPD3-212ENST00000534290 RGS12O14924 1447 aa15.03■□□□□ -0
NCAPD3-212ENST00000534290 FNBP4Q8N3X1 1017 aaPredicted RBP15.02■□□□□ -0
NCAPD3-212ENST00000534290 SLC4A1APQ9BWU0 796 aaKnown RBP15.02■□□□□ -0
NCAPD3-212ENST00000534290 TRPC5Q9UL62 973 aaPredicted RBP15.02■□□□□ -0
NCAPD3-212ENST00000534290 PTCH1Q13635 1447 aa15.01□□□□□ -0.01
NCAPD3-212ENST00000534290 NALCNQ8IZF0 1738 aa15.01□□□□□ -0.01
NCAPD3-212ENST00000534290 ESCO1Q5FWF5 840 aa15.01□□□□□ -0.01
NCAPD3-212ENST00000534290 KIF1BO60333 1816 aa14.99□□□□□ -0.01
NCAPD3-212ENST00000534290 EP400Q96L91 3159 aa14.98□□□□□ -0.01
NCAPD3-212ENST00000534290 ATAD2Q6PL18 1390 aa14.98□□□□□ -0.01
NCAPD3-212ENST00000534290 NPHP3Q7Z494 1330 aa14.97□□□□□ -0.01
NCAPD3-212ENST00000534290 FOXO3O43524 673 aa14.97□□□□□ -0.01
NCAPD3-212ENST00000534290 XPCQ01831 940 aaPredicted RBP14.96□□□□□ -0.01
NCAPD3-212ENST00000534290 FOXD1Q16676 465 aa14.96□□□□□ -0.01
NCAPD3-212ENST00000534290 PRAG1Q86YV5 1406 aa14.96□□□□□ -0.01
NCAPD3-212ENST00000534290 STK26Q9P289 416 aa14.96□□□□□ -0.01
NCAPD3-212ENST00000534290 LAMC1P11047 1609 aa14.95□□□□□ -0.02
NCAPD3-212ENST00000534290 RGL3Q3MIN7 710 aa14.95□□□□□ -0.02
NCAPD3-212ENST00000534290 WAPLQ7Z5K2 1190 aa14.95□□□□□ -0.02
NCAPD3-212ENST00000534290 ADGRF5Q8IZF2 1346 aa14.94□□□□□ -0.02
NCAPD3-212ENST00000534290 NUTM2FA1L443 756 aa14.94□□□□□ -0.02
NCAPD3-212ENST00000534290 ATRNO75882 1429 aa14.93□□□□□ -0.02
NCAPD3-212ENST00000534290 ANP32CO43423 234 aa14.93□□□□□ -0.02
NCAPD3-212ENST00000534290 EIF4G2P78344 907 aaKnown RBP eCLIP14.93□□□□□ -0.02
NCAPD3-212ENST00000534290 YTHDC1Q96MU7 727 aaKnown RBP14.93□□□□□ -0.02
NCAPD3-212ENST00000534290 ANKRD30BQ9BXX2 1392 aa14.93□□□□□ -0.02
NCAPD3-212ENST00000534290 TMEM132EQ6IEE7 984 aa14.92□□□□□ -0.02
NCAPD3-212ENST00000534290 GJD4Q96KN9 370 aaPredicted RBP14.92□□□□□ -0.02
NCAPD3-212ENST00000534290 LRPPRCP42704 1394 aaKnown RBP14.92□□□□□ -0.02
NCAPD3-212ENST00000534290 BCL9LQ86UU0 1499 aa14.91□□□□□ -0.02
NCAPD3-212ENST00000534290 CCDC125Q86Z20 511 aa14.91□□□□□ -0.02
NCAPD3-212ENST00000534290 ZRANB1Q9UGI0 708 aa14.91□□□□□ -0.02
NCAPD3-212ENST00000534290 MYOM2P54296 1465 aa14.9□□□□□ -0.02
NCAPD3-212ENST00000534290 CCER2I3L3R5 266 aa14.9□□□□□ -0.02
NCAPD3-212ENST00000534290 DDX10Q13206 875 aaKnown RBP14.9□□□□□ -0.02
NCAPD3-212ENST00000534290 PXDNQ92626 1479 aa14.89□□□□□ -0.03
NCAPD3-212ENST00000534290 COL22A1Q8NFW1 1626 aaPredicted RBP14.88□□□□□ -0.03
NCAPD3-212ENST00000534290 ABCC11Q96J66 1382 aa14.88□□□□□ -0.03
NCAPD3-212ENST00000534290 UNC5CLQ8IV45 518 aa14.88□□□□□ -0.03
NCAPD3-212ENST00000534290 PPLO60437 1756 aa14.88□□□□□ -0.03
NCAPD3-212ENST00000534290 CDC42BPGQ6DT37 1551 aa14.87□□□□□ -0.03
NCAPD3-212ENST00000534290 CCDC144AA2RUR9 1427 aa14.87□□□□□ -0.03
NCAPD3-212ENST00000534290 KRT28Q7Z3Y7 464 aa14.87□□□□□ -0.03
NCAPD3-212ENST00000534290 L3MBTL2Q969R5 705 aa14.87□□□□□ -0.03
NCAPD3-212ENST00000534290 SPATA31A3Q5VYP0 1347 aa14.87□□□□□ -0.03
NCAPD3-212ENST00000534290 PLEKHH1Q9ULM0 1364 aa14.86□□□□□ -0.03
NCAPD3-212ENST00000534290 TECPR2O15040 1411 aa14.86□□□□□ -0.03
NCAPD3-212ENST00000534290 SPATA31E1Q6ZUB1 1445 aa14.85□□□□□ -0.03
NCAPD3-212ENST00000534290 SIRT1Q96EB6 747 aa14.85□□□□□ -0.03
NCAPD3-212ENST00000534290 GTF3C3Q9Y5Q9 886 aa14.85□□□□□ -0.03
NCAPD3-212ENST00000534290 HAP1P54257 671 aaPredicted RBP14.83□□□□□ -0.04
NCAPD3-212ENST00000534290 PSME1Q06323 249 aa14.83□□□□□ -0.04
NCAPD3-212ENST00000534290 C14orf93Q9H972 538 aaKnown RBP14.83□□□□□ -0.04
NCAPD3-212ENST00000534290 PHF8Q9UPP1 1060 aa14.83□□□□□ -0.04
NCAPD3-212ENST00000534290 PLEKHG5O94827 1062 aa14.82□□□□□ -0.04
NCAPD3-212ENST00000534290 CABLES1Q8TDN4 633 aa14.82□□□□□ -0.04
NCAPD3-212ENST00000534290 YTHDC2Q9H6S0 1430 aaKnown RBP14.82□□□□□ -0.04
NCAPD3-212ENST00000534290 PIK3C2GO75747 1445 aa14.81□□□□□ -0.04
NCAPD3-212ENST00000534290 RALGAPBQ86X10 1494 aa14.81□□□□□ -0.04
NCAPD3-212ENST00000534290 SLIT2O94813 1529 aa14.81□□□□□ -0.04
NCAPD3-212ENST00000534290 HSPA5P11021 654 aaKnown RBP14.8□□□□□ -0.04
NCAPD3-212ENST00000534290 CFAP70Q5T0N1 1121 aa14.8□□□□□ -0.04
NCAPD3-212ENST00000534290 LMOD2Q6P5Q4 547 aa14.8□□□□□ -0.04
NCAPD3-212ENST00000534290 SEPT12Q8IYM1 358 aa14.8□□□□□ -0.04
NCAPD3-212ENST00000534290 ONECUT3O60422 494 aaPredicted RBP14.79□□□□□ -0.04
NCAPD3-212ENST00000534290 VPS72Q15906 364 aa14.79□□□□□ -0.04
NCAPD3-212ENST00000534290 CCDC9Q9Y3X0 531 aaKnown RBP14.79□□□□□ -0.04
NCAPD3-212ENST00000534290 MARF1Q9Y4F3 1742 aaKnown RBP14.78□□□□□ -0.04
NCAPD3-212ENST00000534290 BLMP54132 1417 aaPredicted RBP14.78□□□□□ -0.04
NCAPD3-212ENST00000534290 SF3B2Q13435 895 aaKnown RBP14.78□□□□□ -0.04
NCAPD3-212ENST00000534290 SAFB2Q14151 953 aaKnown RBP eCLIP14.78□□□□□ -0.04
NCAPD3-212ENST00000534290 DEFB132Q7Z7B7 95 aa14.78□□□□□ -0.04
NCAPD3-212ENST00000534290 PRAM1Q96QH2 718 aa14.78□□□□□ -0.04
NCAPD3-212ENST00000534290 FAM83GA6ND36 823 aa14.76□□□□□ -0.05
NCAPD3-212ENST00000534290 PELP1Q8IZL8 1130 aaKnown RBP14.76□□□□□ -0.05
NCAPD3-212ENST00000534290 PMFBP1Q8TBY8 1022 aa14.76□□□□□ -0.05
NCAPD3-212ENST00000534290 POGKQ9P215 609 aa14.76□□□□□ -0.05
NCAPD3-212ENST00000534290 GLI3P10071 1580 aa14.76□□□□□ -0.05
NCAPD3-212ENST00000534290 TNS3Q68CZ2 1445 aa14.75□□□□□ -0.05
NCAPD3-212ENST00000534290 FMN2Q9NZ56 1722 aa14.75□□□□□ -0.05
NCAPD3-212ENST00000534290 SBNO1A3KN83 1393 aa14.75□□□□□ -0.05
NCAPD3-212ENST00000534290 KRT27Q7Z3Y8 459 aa14.75□□□□□ -0.05
NCAPD3-212ENST00000534290 KNDC1Q76NI1 1749 aa14.74□□□□□ -0.05
NCAPD3-212ENST00000534290 IFT172Q9UG01 1749 aa14.74□□□□□ -0.05
NCAPD3-212ENST00000534290 KIF1AQ12756 1690 aa14.74□□□□□ -0.05
NCAPD3-212ENST00000534290 ARHGEF10O15013 1369 aa14.73□□□□□ -0.05
NCAPD3-212ENST00000534290 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.73□□□□□ -0.05
NCAPD3-212ENST00000534290 HIRIP3Q9BW71 556 aaPredicted RBP14.73□□□□□ -0.05
NCAPD3-212ENST00000534290 USP32Q8NFA0 1604 aa14.73□□□□□ -0.05
NCAPD3-212ENST00000534290 NRXN1Q9ULB1 1477 aa14.72□□□□□ -0.05
NCAPD3-212ENST00000534290 STAC3Q96MF2 364 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms