RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 RBM26Q5T8P6 1007 aaKnown RBP5.66□□□□□ -1.5
CHMP4A-208ENST00000534106 SPSB2Q99619 263 aa5.66□□□□□ -1.5
CHMP4A-208ENST00000534106 CHD1O14646 1710 aa5.65□□□□□ -1.5
CHMP4A-208ENST00000534106 SNAPC4Q5SXM2 1469 aa5.65□□□□□ -1.5
CHMP4A-208ENST00000534106 DDX11L8A8MPP1 907 aa5.65□□□□□ -1.5
CHMP4A-208ENST00000534106 FOXC1Q12948 553 aa5.65□□□□□ -1.5
CHMP4A-208ENST00000534106 TRIM67Q6ZTA4 783 aa5.65□□□□□ -1.5
CHMP4A-208ENST00000534106 EMID1Q96A84 441 aaPredicted RBP5.65□□□□□ -1.5
CHMP4A-208ENST00000534106 GNPATO15228 680 aa5.64□□□□□ -1.51
CHMP4A-208ENST00000534106 PRR20EP86478 221 aa5.64□□□□□ -1.51
CHMP4A-208ENST00000534106 PRR20CP86479 221 aa5.64□□□□□ -1.51
CHMP4A-208ENST00000534106 PRR20DP86480 221 aa5.64□□□□□ -1.51
CHMP4A-208ENST00000534106 PRR20BP86481 221 aa5.64□□□□□ -1.51
CHMP4A-208ENST00000534106 PRR20AP86496 221 aa5.64□□□□□ -1.51
CHMP4A-208ENST00000534106 MYT1Q01538 1121 aa5.64□□□□□ -1.51
CHMP4A-208ENST00000534106 METTL3Q86U44 580 aaKnown RBP5.64□□□□□ -1.51
CHMP4A-208ENST00000534106 ZNF775Q96BV0 537 aaPredicted RBP5.64□□□□□ -1.51
CHMP4A-208ENST00000534106 POLA1P09884 1462 aaPredicted RBP5.64□□□□□ -1.51
CHMP4A-208ENST00000534106 CLASP1Q7Z460 1538 aa5.64□□□□□ -1.51
CHMP4A-208ENST00000534106 ERCC6L2Q5T890 1561 aa5.63□□□□□ -1.51
CHMP4A-208ENST00000534106 DAXXQ9UER7 740 aaPredicted RBP5.63□□□□□ -1.51
CHMP4A-208ENST00000534106 TARBP1Q13395 1621 aaKnown RBP5.63□□□□□ -1.51
CHMP4A-208ENST00000534106 GDF9O60383 454 aa5.62□□□□□ -1.51
CHMP4A-208ENST00000534106 FMNL1O95466 1100 aaPredicted RBP5.62□□□□□ -1.51
CHMP4A-208ENST00000534106 FECHP22830 423 aa5.62□□□□□ -1.51
CHMP4A-208ENST00000534106 TESPA1A2RU30 521 aaPredicted RBP5.61□□□□□ -1.51
CHMP4A-208ENST00000534106 ZBTB24O43167 697 aaPredicted RBP5.61□□□□□ -1.51
CHMP4A-208ENST00000534106 CD2BP2O95400 341 aaKnown RBP5.61□□□□□ -1.51
CHMP4A-208ENST00000534106 TOP2AP11388 1531 aaKnown RBP5.61□□□□□ -1.51
CHMP4A-208ENST00000534106 ATP6V1AP38606 617 aa5.61□□□□□ -1.51
CHMP4A-208ENST00000534106 FUT2Q10981 343 aa5.61□□□□□ -1.51
CHMP4A-208ENST00000534106 PLA2G2CQ5R387 149 aa5.61□□□□□ -1.51
CHMP4A-208ENST00000534106 SULF1Q8IWU6 871 aa5.61□□□□□ -1.51
CHMP4A-208ENST00000534106 ABCC8Q09428 1581 aa5.6□□□□□ -1.51
CHMP4A-208ENST00000534106 NLRP7Q8WX94 980 aa5.6□□□□□ -1.51
CHMP4A-208ENST00000534106 FCF1Q9Y324 198 aaKnown RBP5.6□□□□□ -1.51
CHMP4A-208ENST00000534106 DNMBPQ6XZF7 1577 aa5.59□□□□□ -1.51
CHMP4A-208ENST00000534106 GRIPAP1Q4V328 841 aa5.59□□□□□ -1.51
CHMP4A-208ENST00000534106 MORN1Q5T089 497 aa5.59□□□□□ -1.51
CHMP4A-208ENST00000534106 CYP4X1Q8N118 509 aa5.59□□□□□ -1.51
CHMP4A-208ENST00000534106 ST8SIA5O15466 376 aa5.58□□□□□ -1.52
CHMP4A-208ENST00000534106 GCGRP47871 477 aa5.58□□□□□ -1.52
CHMP4A-208ENST00000534106 RPIAP49247 311 aa5.58□□□□□ -1.52
CHMP4A-208ENST00000534106 GPIHBP1Q8IV16 184 aa5.58□□□□□ -1.52
CHMP4A-208ENST00000534106 SLC27A5Q9Y2P5 690 aa5.58□□□□□ -1.52
CHMP4A-208ENST00000534106 SYNJ1O43426 1573 aa5.58□□□□□ -1.52
CHMP4A-208ENST00000534106 SYNJ2O15056 1496 aa5.58□□□□□ -1.52
CHMP4A-208ENST00000534106 GRIN2BQ13224 1484 aa5.58□□□□□ -1.52
CHMP4A-208ENST00000534106 POTECB2RU33 542 aa5.57□□□□□ -1.52
CHMP4A-208ENST00000534106 HAP1P54257 671 aaPredicted RBP5.57□□□□□ -1.52
CHMP4A-208ENST00000534106 PLCB2Q00722 1185 aa5.57□□□□□ -1.52
CHMP4A-208ENST00000534106 LMOD2Q6P5Q4 547 aa5.57□□□□□ -1.52
CHMP4A-208ENST00000534106 AAASQ9NRG9 546 aa5.57□□□□□ -1.52
CHMP4A-208ENST00000534106 FGD5Q6ZNL6 1462 aa5.57□□□□□ -1.52
CHMP4A-208ENST00000534106 TTC24A2A3L6 582 aaPredicted RBP5.56□□□□□ -1.52
CHMP4A-208ENST00000534106 FBXO41Q8TF61 875 aa5.56□□□□□ -1.52
CHMP4A-208ENST00000534106 PKD2L1Q9P0L9 805 aa5.56□□□□□ -1.52
CHMP4A-208ENST00000534106 MAGI1Q96QZ7 1491 aaPredicted RBP5.56□□□□□ -1.52
CHMP4A-208ENST00000534106 TTBK1Q5TCY1 1321 aaPredicted RBP5.55□□□□□ -1.52
CHMP4A-208ENST00000534106 TULP1O00294 542 aaPredicted RBP5.55□□□□□ -1.52
CHMP4A-208ENST00000534106 AXIN1O15169 862 aa5.55□□□□□ -1.52
CHMP4A-208ENST00000534106 FAM160A2Q8N612 972 aaPredicted RBP5.55□□□□□ -1.52
CHMP4A-208ENST00000534106 THAP11Q96EK4 314 aa5.55□□□□□ -1.52
CHMP4A-208ENST00000534106 PRDM9Q9NQV7 894 aa5.55□□□□□ -1.52
CHMP4A-208ENST00000534106 GPR37O15354 613 aa5.54□□□□□ -1.52
CHMP4A-208ENST00000534106 Q3C1V9 767 aa5.54□□□□□ -1.52
CHMP4A-208ENST00000534106 BRICD5Q6PL45 260 aa5.54□□□□□ -1.52
CHMP4A-208ENST00000534106 RNF19BQ6ZMZ0 732 aa5.54□□□□□ -1.52
CHMP4A-208ENST00000534106 ILDR2Q71H61 639 aa5.54□□□□□ -1.52
CHMP4A-208ENST00000534106 SALL2Q9Y467 1007 aaPredicted RBP5.54□□□□□ -1.52
CHMP4A-208ENST00000534106 PRG4Q92954 1404 aaPredicted RBP5.54□□□□□ -1.52
CHMP4A-208ENST00000534106 ABCC10Q5T3U5 1492 aa5.53□□□□□ -1.52
CHMP4A-208ENST00000534106 CCDC24Q8N4L8 307 aa5.53□□□□□ -1.52
CHMP4A-208ENST00000534106 PHOX2BQ99453 314 aa5.53□□□□□ -1.52
CHMP4A-208ENST00000534106 C11orf95C9JLR9 678 aaPredicted RBP5.52□□□□□ -1.53
CHMP4A-208ENST00000534106 CTC1Q2NKJ3 1217 aa5.52□□□□□ -1.53
CHMP4A-208ENST00000534106 MSS51Q4VC12 460 aa5.52□□□□□ -1.53
CHMP4A-208ENST00000534106 TOR4AQ9NXH8 423 aa5.52□□□□□ -1.53
CHMP4A-208ENST00000534106 CUX1P39880 1505 aa5.52□□□□□ -1.53
CHMP4A-208ENST00000534106 CEP170Q5SW79 1584 aa5.51□□□□□ -1.53
CHMP4A-208ENST00000534106 GMPR2Q9P2T1 348 aaKnown RBP5.51□□□□□ -1.53
CHMP4A-208ENST00000534106 DACH1Q9UI36 760 aa5.51□□□□□ -1.53
CHMP4A-208ENST00000534106 ADGRL1O94910 1474 aa5.51□□□□□ -1.53
CHMP4A-208ENST00000534106 KDM4AO75164 1064 aa5.5□□□□□ -1.53
CHMP4A-208ENST00000534106 AVPP01185 164 aa5.5□□□□□ -1.53
CHMP4A-208ENST00000534106 CD46P15529 392 aa5.5□□□□□ -1.53
CHMP4A-208ENST00000534106 TREML4Q6UXN2 200 aa5.5□□□□□ -1.53
CHMP4A-208ENST00000534106 KRI1Q8N9T8 703 aaKnown RBP5.5□□□□□ -1.53
CHMP4A-208ENST00000534106 USB1Q9BQ65 265 aaKnown RBP5.5□□□□□ -1.53
CHMP4A-208ENST00000534106 GRIN2AQ12879 1464 aa5.5□□□□□ -1.53
CHMP4A-208ENST00000534106 NUP160Q12769 1436 aa5.49□□□□□ -1.53
CHMP4A-208ENST00000534106 MDM2Q00987 491 aaPredicted RBP5.49□□□□□ -1.53
CHMP4A-208ENST00000534106 TRIM32Q13049 653 aa5.49□□□□□ -1.53
CHMP4A-208ENST00000534106 MAP2K5Q13163 448 aa5.49□□□□□ -1.53
CHMP4A-208ENST00000534106 CRIPAKQ8N1N5 446 aa5.49□□□□□ -1.53
CHMP4A-208ENST00000534106 SNIP1Q8TAD8 396 aaKnown RBP5.49□□□□□ -1.53
CHMP4A-208ENST00000534106 COL17A1Q9UMD9 1497 aaPredicted RBP5.49□□□□□ -1.53
CHMP4A-208ENST00000534106 KIF13AQ9H1H9 1805 aa5.48□□□□□ -1.53
CHMP4A-208ENST00000534106 WNT7AO00755 349 aa5.48□□□□□ -1.53
CHMP4A-208ENST00000534106 HECW2Q9P2P5 1572 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms