RNA–Protein interactions for RNA: ENST00000533989.5

MS4A6A-220, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5

Gene MS4A6A, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-220ENST00000533989 VGFO15240 615 aaPredicted RBP11.91□□□□□ -0.5
MS4A6A-220ENST00000533989 PTCH1Q13635 1447 aa11.91□□□□□ -0.5
MS4A6A-220ENST00000533989 SETD5Q9C0A6 1442 aa11.91□□□□□ -0.5
MS4A6A-220ENST00000533989 ASXL1Q8IXJ9 1541 aa11.91□□□□□ -0.5
MS4A6A-220ENST00000533989 SHPRHQ149N8 1683 aa11.9□□□□□ -0.5
MS4A6A-220ENST00000533989 ZNF772Q68DY9 489 aaPredicted RBP11.89□□□□□ -0.51
MS4A6A-220ENST00000533989 TRIM52Q96A61 297 aa11.87□□□□□ -0.51
MS4A6A-220ENST00000533989 LRRC59Q96AG4 307 aaKnown RBP11.87□□□□□ -0.51
MS4A6A-220ENST00000533989 ROBO2Q9HCK4 1378 aa11.86□□□□□ -0.51
MS4A6A-220ENST00000533989 NHSL1Q5SYE7 1610 aa11.86□□□□□ -0.51
MS4A6A-220ENST00000533989 C1orf167Q5SNV9 1468 aa11.85□□□□□ -0.51
MS4A6A-220ENST00000533989 MEX3CQ5U5Q3 659 aaKnown RBP11.85□□□□□ -0.51
MS4A6A-220ENST00000533989 REM2Q8IYK8 340 aaPredicted RBP11.85□□□□□ -0.51
MS4A6A-220ENST00000533989 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
MS4A6A-220ENST00000533989 KIF1BO60333 1816 aa11.85□□□□□ -0.51
MS4A6A-220ENST00000533989 SETD1AO15047 1707 aaKnown RBP11.84□□□□□ -0.51
MS4A6A-220ENST00000533989 LAMC1P11047 1609 aa11.84□□□□□ -0.51
MS4A6A-220ENST00000533989 ACIN1Q9UKV3 1341 aaKnown RBP11.84□□□□□ -0.51
MS4A6A-220ENST00000533989 CDK12Q9NYV4 1490 aaPredicted RBP11.83□□□□□ -0.52
MS4A6A-220ENST00000533989 NALCNQ8IZF0 1738 aa11.83□□□□□ -0.52
MS4A6A-220ENST00000533989 PNPLA6Q8IY17 1366 aa11.83□□□□□ -0.52
MS4A6A-220ENST00000533989 SPATA31E1Q6ZUB1 1445 aa11.83□□□□□ -0.52
MS4A6A-220ENST00000533989 HAX1O00165 279 aa11.82□□□□□ -0.52
MS4A6A-220ENST00000533989 CCDC144AA2RUR9 1427 aa11.82□□□□□ -0.52
MS4A6A-220ENST00000533989 TECPR2O15040 1411 aa11.82□□□□□ -0.52
MS4A6A-220ENST00000533989 SOS2Q07890 1332 aaPredicted RBP11.82□□□□□ -0.52
MS4A6A-220ENST00000533989 ANKRD30BQ9BXX2 1392 aa11.81□□□□□ -0.52
MS4A6A-220ENST00000533989 RXRBP28702 533 aa11.81□□□□□ -0.52
MS4A6A-220ENST00000533989 PPLO60437 1756 aa11.8□□□□□ -0.52
MS4A6A-220ENST00000533989 NUTM2BA6NNL0 878 aaPredicted RBP11.8□□□□□ -0.52
MS4A6A-220ENST00000533989 NUTM2EB1AL46 878 aaPredicted RBP11.8□□□□□ -0.52
MS4A6A-220ENST00000533989 NUTM2AQ8IVF1 878 aaPredicted RBP11.8□□□□□ -0.52
MS4A6A-220ENST00000533989 MPHOSPH9Q99550 1183 aa11.8□□□□□ -0.52
MS4A6A-220ENST00000533989 AFF2P51816 1311 aa11.8□□□□□ -0.52
MS4A6A-220ENST00000533989 SRCAPQ6ZRS2 3230 aa11.8□□□□□ -0.52
MS4A6A-220ENST00000533989 FXR2P51116 673 aaKnown RBP eCLIP11.79□□□□□ -0.52
MS4A6A-220ENST00000533989 DDX17Q92841 729 aaKnown RBP11.79□□□□□ -0.52
MS4A6A-220ENST00000533989 ADGRF5Q8IZF2 1346 aa11.79□□□□□ -0.52
MS4A6A-220ENST00000533989 CDC42BPGQ6DT37 1551 aa11.79□□□□□ -0.52
MS4A6A-220ENST00000533989 ABCC11Q96J66 1382 aa11.79□□□□□ -0.52
MS4A6A-220ENST00000533989 ORAI2Q96SN7 254 aa11.78□□□□□ -0.52
MS4A6A-220ENST00000533989 LRPPRCP42704 1394 aaKnown RBP11.78□□□□□ -0.52
MS4A6A-220ENST00000533989 PIK3C2GO75747 1445 aa11.77□□□□□ -0.52
MS4A6A-220ENST00000533989 UPF1Q92900 1129 aaKnown RBP eCLIP11.77□□□□□ -0.53
MS4A6A-220ENST00000533989 RBM6P78332 1123 aaKnown RBP11.76□□□□□ -0.53
MS4A6A-220ENST00000533989 SIRT1Q96EB6 747 aa11.76□□□□□ -0.53
MS4A6A-220ENST00000533989 PLSCR2Q9NRY7 297 aa11.76□□□□□ -0.53
MS4A6A-220ENST00000533989 NPHP3Q7Z494 1330 aa11.76□□□□□ -0.53
MS4A6A-220ENST00000533989 C8orf37Q96NL8 207 aa11.75□□□□□ -0.53
MS4A6A-220ENST00000533989 QTRT2Q9H974 415 aaKnown RBP11.75□□□□□ -0.53
MS4A6A-220ENST00000533989 NRXN1Q9ULB1 1477 aa11.75□□□□□ -0.53
MS4A6A-220ENST00000533989 EP400Q96L91 3159 aa11.75□□□□□ -0.53
MS4A6A-220ENST00000533989 RGL3Q3MIN7 710 aa11.74□□□□□ -0.53
MS4A6A-220ENST00000533989 FNBP4Q8N3X1 1017 aaPredicted RBP11.74□□□□□ -0.53
MS4A6A-220ENST00000533989 MYOM2P54296 1465 aa11.74□□□□□ -0.53
MS4A6A-220ENST00000533989 PXDNQ92626 1479 aa11.74□□□□□ -0.53
MS4A6A-220ENST00000533989 COL22A1Q8NFW1 1626 aaPredicted RBP11.74□□□□□ -0.53
MS4A6A-220ENST00000533989 PITPNM1O00562 1244 aa11.73□□□□□ -0.53
MS4A6A-220ENST00000533989 ESCO1Q5FWF5 840 aa11.73□□□□□ -0.53
MS4A6A-220ENST00000533989 NGLY1Q96IV0 654 aa11.73□□□□□ -0.53
MS4A6A-220ENST00000533989 C14orf93Q9H972 538 aaKnown RBP11.73□□□□□ -0.53
MS4A6A-220ENST00000533989 IFT172Q9UG01 1749 aa11.73□□□□□ -0.53
MS4A6A-220ENST00000533989 RGS12O14924 1447 aa11.72□□□□□ -0.53
MS4A6A-220ENST00000533989 YTHDC2Q9H6S0 1430 aaKnown RBP11.72□□□□□ -0.53
MS4A6A-220ENST00000533989 ADAMTS2O95450 1211 aa11.72□□□□□ -0.53
MS4A6A-220ENST00000533989 WAPLQ7Z5K2 1190 aa11.72□□□□□ -0.53
MS4A6A-220ENST00000533989 STK26Q9P289 416 aa11.71□□□□□ -0.53
MS4A6A-220ENST00000533989 KNDC1Q76NI1 1749 aa11.71□□□□□ -0.54
MS4A6A-220ENST00000533989 PLEKHH1Q9ULM0 1364 aa11.7□□□□□ -0.54
MS4A6A-220ENST00000533989 FOXO3O43524 673 aa11.7□□□□□ -0.54
MS4A6A-220ENST00000533989 TMEM132EQ6IEE7 984 aa11.7□□□□□ -0.54
MS4A6A-220ENST00000533989 USP21Q9UK80 565 aa11.7□□□□□ -0.54
MS4A6A-220ENST00000533989 TRPC5Q9UL62 973 aaPredicted RBP11.7□□□□□ -0.54
MS4A6A-220ENST00000533989 ATRNO75882 1429 aa11.69□□□□□ -0.54
MS4A6A-220ENST00000533989 BCL9LQ86UU0 1499 aa11.68□□□□□ -0.54
MS4A6A-220ENST00000533989 DHX57Q6P158 1386 aaKnown RBP11.67□□□□□ -0.54
MS4A6A-220ENST00000533989 SPATA31A3Q5VYP0 1347 aa11.67□□□□□ -0.54
MS4A6A-220ENST00000533989 ATAD2Q6PL18 1390 aa11.67□□□□□ -0.54
MS4A6A-220ENST00000533989 RAB3GAP2Q9H2M9 1393 aa11.67□□□□□ -0.54
MS4A6A-220ENST00000533989 FMN2Q9NZ56 1722 aa11.66□□□□□ -0.54
MS4A6A-220ENST00000533989 DLC1Q96QB1 1528 aa11.66□□□□□ -0.54
MS4A6A-220ENST00000533989 HRCP23327 699 aa11.66□□□□□ -0.54
MS4A6A-220ENST00000533989 CFAP70Q5T0N1 1121 aa11.66□□□□□ -0.54
MS4A6A-220ENST00000533989 STAC3Q96MF2 364 aa11.66□□□□□ -0.54
MS4A6A-220ENST00000533989 KIF1AQ12756 1690 aa11.65□□□□□ -0.54
MS4A6A-220ENST00000533989 XPCQ01831 940 aaPredicted RBP11.65□□□□□ -0.54
MS4A6A-220ENST00000533989 ADGRB1O14514 1584 aa11.64□□□□□ -0.55
MS4A6A-220ENST00000533989 ANKARQ7Z5J8 1434 aa11.64□□□□□ -0.55
MS4A6A-220ENST00000533989 NUTM2FA1L443 756 aa11.64□□□□□ -0.55
MS4A6A-220ENST00000533989 KRT28Q7Z3Y7 464 aa11.64□□□□□ -0.55
MS4A6A-220ENST00000533989 PRAM1Q96QH2 718 aa11.64□□□□□ -0.55
MS4A6A-220ENST00000533989 PHF8Q9UPP1 1060 aa11.64□□□□□ -0.55
MS4A6A-220ENST00000533989 SBNO1A3KN83 1393 aa11.64□□□□□ -0.55
MS4A6A-220ENST00000533989 PSME1Q06323 249 aa11.63□□□□□ -0.55
MS4A6A-220ENST00000533989 GJD4Q96KN9 370 aaPredicted RBP11.63□□□□□ -0.55
MS4A6A-220ENST00000533989 SLIT2O94813 1529 aa11.63□□□□□ -0.55
MS4A6A-220ENST00000533989 TNS3Q68CZ2 1445 aa11.62□□□□□ -0.55
MS4A6A-220ENST00000533989 EVX2Q03828 476 aa11.62□□□□□ -0.55
MS4A6A-220ENST00000533989 UNC5CLQ8IV45 518 aa11.62□□□□□ -0.55
MS4A6A-220ENST00000533989 ADGRB2O60241 1585 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms