RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	MMP16	P51512	607 aa		10.23	□□□□□ -0.77
ATM-223	ENST00000533979	GUCA2A	Q02747	115 aa		10.23	□□□□□ -0.77
ATM-223	ENST00000533979	LIAT1	Q6ZQX7	453 aa		10.22	□□□□□ -0.77
ATM-223	ENST00000533979	EMID1	Q96A84	441 aa	Predicted RBP	10.22	□□□□□ -0.77
ATM-223	ENST00000533979	IRX2	Q9BZI1	471 aa	Predicted RBP	10.22	□□□□□ -0.77
ATM-223	ENST00000533979	SPTLC1	O15269	473 aa		10.21	□□□□□ -0.77
ATM-223	ENST00000533979	RETREG3	Q86VR2	466 aa		10.21	□□□□□ -0.77
ATM-223	ENST00000533979	SYMPK	Q92797	1274 aa	Known RBP	10.21	□□□□□ -0.77
ATM-223	ENST00000533979	SPDYE5	A6NIY4	337 aa		10.2	□□□□□ -0.78
ATM-223	ENST00000533979	SPRYD7	Q5W111	196 aa		10.2	□□□□□ -0.78
ATM-223	ENST00000533979	RIC3	Q7Z5B4	369 aa		10.2	□□□□□ -0.78
ATM-223	ENST00000533979	ZNF598	Q86UK7	904 aa	Known RBP	10.2	□□□□□ -0.78
ATM-223	ENST00000533979	RSPH6A	Q9H0K4	717 aa		10.2	□□□□□ -0.78
ATM-223	ENST00000533979	C6orf229	H3BNL8	230 aa		10.19	□□□□□ -0.78
ATM-223	ENST00000533979	DXO	O77932	396 aa	Known RBP	10.19	□□□□□ -0.78
ATM-223	ENST00000533979	RPIA	P49247	311 aa		10.19	□□□□□ -0.78
ATM-223	ENST00000533979	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.19	□□□□□ -0.78
ATM-223	ENST00000533979	CD2BP2	O95400	341 aa	Known RBP	10.18	□□□□□ -0.78
ATM-223	ENST00000533979	TUSC1	Q2TAM9	212 aa		10.18	□□□□□ -0.78
ATM-223	ENST00000533979	PLA2G2C	Q5R387	149 aa		10.18	□□□□□ -0.78
ATM-223	ENST00000533979	KDM4C	Q9H3R0	1056 aa		10.18	□□□□□ -0.78
ATM-223	ENST00000533979	FCF1	Q9Y324	198 aa	Known RBP	10.18	□□□□□ -0.78
ATM-223	ENST00000533979	LAPTM4A	Q15012	233 aa		10.17	□□□□□ -0.78
ATM-223	ENST00000533979	PRDM9	Q9NQV7	894 aa		10.17	□□□□□ -0.78
ATM-223	ENST00000533979	PCDHB15	Q9Y5E8	787 aa		10.17	□□□□□ -0.78
ATM-223	ENST00000533979	MTMR2	Q13614	643 aa		10.16	□□□□□ -0.78
ATM-223	ENST00000533979	PRPF38B	Q5VTL8	546 aa	Known RBP	10.16	□□□□□ -0.78
ATM-223	ENST00000533979	ZBTB24	O43167	697 aa	Predicted RBP	10.15	□□□□□ -0.78
ATM-223	ENST00000533979	JUND	P17535	347 aa		10.15	□□□□□ -0.78
ATM-223	ENST00000533979	MYSM1	Q5VVJ2	828 aa		10.15	□□□□□ -0.78
ATM-223	ENST00000533979	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.15	□□□□□ -0.78
ATM-223	ENST00000533979	GFRA3	O60609	400 aa		10.14	□□□□□ -0.79
ATM-223	ENST00000533979	TPRN	Q4KMQ1	711 aa		10.14	□□□□□ -0.79
ATM-223	ENST00000533979	DESI1	Q6ICB0	168 aa		10.14	□□□□□ -0.79
ATM-223	ENST00000533979	DDRGK1	Q96HY6	314 aa		10.14	□□□□□ -0.79
ATM-223	ENST00000533979	HRC	P23327	699 aa		10.12	□□□□□ -0.79
ATM-223	ENST00000533979	PRR7	Q8TB68	274 aa		10.12	□□□□□ -0.79
ATM-223	ENST00000533979	FAM117A	Q9C073	453 aa		10.12	□□□□□ -0.79
ATM-223	ENST00000533979	ZBTB3	Q9H5J0	574 aa		10.12	□□□□□ -0.79
ATM-223	ENST00000533979	SKIV2L	Q15477	1246 aa	Known RBP	10.11	□□□□□ -0.79
ATM-223	ENST00000533979	LIMD1	Q9UGP4	676 aa		10.11	□□□□□ -0.79
ATM-223	ENST00000533979	ZNF697	Q5TEC3	545 aa		10.1	□□□□□ -0.79
ATM-223	ENST00000533979	PDZRN3	Q9UPQ7	1066 aa		10.1	□□□□□ -0.79
ATM-223	ENST00000533979	NRG2	O14511	850 aa	Predicted RBP	10.09	□□□□□ -0.79
ATM-223	ENST00000533979	LILRB3	O75022	631 aa		10.09	□□□□□ -0.79
ATM-223	ENST00000533979	PRR20E	P86478	221 aa		10.09	□□□□□ -0.79
ATM-223	ENST00000533979	PRR20C	P86479	221 aa		10.09	□□□□□ -0.79
ATM-223	ENST00000533979	PRR20D	P86480	221 aa		10.09	□□□□□ -0.79
ATM-223	ENST00000533979	PRR20B	P86481	221 aa		10.09	□□□□□ -0.79
ATM-223	ENST00000533979	PRR20A	P86496	221 aa		10.09	□□□□□ -0.79
ATM-223	ENST00000533979	CCDC24	Q8N4L8	307 aa		10.09	□□□□□ -0.79
ATM-223	ENST00000533979	EVA1B	Q9NVM1	165 aa		10.09	□□□□□ -0.79
ATM-223	ENST00000533979	POLR3E	Q9NVU0	708 aa		10.09	□□□□□ -0.79
ATM-223	ENST00000533979	GDF9	O60383	454 aa		10.08	□□□□□ -0.8
ATM-223	ENST00000533979	TRIM67	Q6ZTA4	783 aa		10.08	□□□□□ -0.8
ATM-223	ENST00000533979	PLEKHG3	A1L390	1219 aa		10.07	□□□□□ -0.8
ATM-223	ENST00000533979	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.07	□□□□□ -0.8
ATM-223	ENST00000533979	NUTM2E	B1AL46	878 aa	Predicted RBP	10.07	□□□□□ -0.8
ATM-223	ENST00000533979	CLK2	P49760	499 aa	Known RBP	10.07	□□□□□ -0.8
ATM-223	ENST00000533979	PTPRN	Q16849	979 aa		10.07	□□□□□ -0.8
ATM-223	ENST00000533979	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.07	□□□□□ -0.8
ATM-223	ENST00000533979	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.07	□□□□□ -0.8
ATM-223	ENST00000533979	NUDT12	Q9BQG2	462 aa		10.07	□□□□□ -0.8
ATM-223	ENST00000533979	NEUROD2	Q15784	382 aa		10.06	□□□□□ -0.8
ATM-223	ENST00000533979	LYPD8	Q6UX82	237 aa		10.06	□□□□□ -0.8
ATM-223	ENST00000533979	CSPP1	Q1MSJ5	1256 aa		10.05	□□□□□ -0.8
ATM-223	ENST00000533979	SH3D19	Q5HYK7	790 aa		10.05	□□□□□ -0.8
ATM-223	ENST00000533979	CABLES1	Q8TDN4	633 aa		10.05	□□□□□ -0.8
ATM-223	ENST00000533979	CFAP99	D6REC4	459 aa		10.04	□□□□□ -0.8
ATM-223	ENST00000533979	CCNYL3	P0C7X3	344 aa		10.04	□□□□□ -0.8
ATM-223	ENST00000533979	TRIM32	Q13049	653 aa		10.04	□□□□□ -0.8
ATM-223	ENST00000533979	QPCT	Q16769	361 aa		10.04	□□□□□ -0.8
ATM-223	ENST00000533979	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.04	□□□□□ -0.8
ATM-223	ENST00000533979	PKD2L1	Q9P0L9	805 aa		10.04	□□□□□ -0.8
ATM-223	ENST00000533979	KCNH2	Q12809	1159 aa		10.03	□□□□□ -0.8
ATM-223	ENST00000533979	RTL5	Q5HYW3	569 aa	Predicted RBP	10.03	□□□□□ -0.8
ATM-223	ENST00000533979	GOPC	Q9HD26	462 aa		10.03	□□□□□ -0.8
ATM-223	ENST00000533979	BRPF1	P55201	1214 aa	Predicted RBP	10.02	□□□□□ -0.81
ATM-223	ENST00000533979		Q6ZNB5	142 aa		10.02	□□□□□ -0.81
ATM-223	ENST00000533979	WNT7B	P56706	349 aa		10.01	□□□□□ -0.81
ATM-223	ENST00000533979	FOXC1	Q12948	553 aa		10.01	□□□□□ -0.81
ATM-223	ENST00000533979	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.01	□□□□□ -0.81
ATM-223	ENST00000533979	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
ATM-223	ENST00000533979	WNT7A	O00755	349 aa		10	□□□□□ -0.81
ATM-223	ENST00000533979	PPP2R2D	Q66LE6	453 aa		10	□□□□□ -0.81
ATM-223	ENST00000533979	IL27	Q8NEV9	243 aa		10	□□□□□ -0.81
ATM-223	ENST00000533979	DGAT1	O75907	488 aa		9.99	□□□□□ -0.81
ATM-223	ENST00000533979	TRAF7	Q6Q0C0	670 aa		9.99	□□□□□ -0.81
ATM-223	ENST00000533979	TNFRSF10A	O00220	468 aa		9.98	□□□□□ -0.81
ATM-223	ENST00000533979	TOR4A	Q9NXH8	423 aa		9.98	□□□□□ -0.81
ATM-223	ENST00000533979	RC3H1	Q5TC82	1133 aa	Known RBP	9.97	□□□□□ -0.81
ATM-223	ENST00000533979	ATP1B4	Q9UN42	357 aa	Predicted RBP	9.97	□□□□□ -0.81
ATM-223	ENST00000533979	SKOR1	P84550	965 aa		9.96	□□□□□ -0.82
ATM-223	ENST00000533979	CYP4X1	Q8N118	509 aa		9.96	□□□□□ -0.82
ATM-223	ENST00000533979	HELB	Q8NG08	1087 aa	Predicted RBP	9.96	□□□□□ -0.82
ATM-223	ENST00000533979	UNC93B1	Q9H1C4	597 aa		9.96	□□□□□ -0.82
ATM-223	ENST00000533979	PER1	O15534	1290 aa	Predicted RBP	9.95	□□□□□ -0.82
ATM-223	ENST00000533979	CTH	P32929	405 aa		9.95	□□□□□ -0.82
ATM-223	ENST00000533979	SNIP1	Q8TAD8	396 aa	Known RBP	9.95	□□□□□ -0.82
ATM-223	ENST00000533979	TSC1	Q92574	1164 aa		9.95	□□□□□ -0.82

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