RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 ASXL2Q76L83 1435 aa5.85□□□□□ -1.47
CTSC-208ENST00000533897 REREQ9P2R6 1566 aa5.85□□□□□ -1.47
CTSC-208ENST00000533897 KNDC1Q76NI1 1749 aa5.85□□□□□ -1.47
CTSC-208ENST00000533897 DLG5Q8TDM6 1919 aa5.85□□□□□ -1.47
CTSC-208ENST00000533897 CENPQQ7L2Z9 268 aaPredicted RBP5.85□□□□□ -1.47
CTSC-208ENST00000533897 AKAP12Q02952 1782 aa5.84□□□□□ -1.47
CTSC-208ENST00000533897 MON2Q7Z3U7 1717 aa5.84□□□□□ -1.47
CTSC-208ENST00000533897 AFAP1Q8N556 730 aa5.84□□□□□ -1.47
CTSC-208ENST00000533897 SPAG9O60271 1321 aaKnown RBP5.84□□□□□ -1.47
CTSC-208ENST00000533897 NRKQ7Z2Y5 1582 aa5.83□□□□□ -1.48
CTSC-208ENST00000533897 ANP32AP39687 249 aaKnown RBP5.83□□□□□ -1.48
CTSC-208ENST00000533897 CFAP65Q6ZU64 1925 aaKnown RBP5.83□□□□□ -1.48
CTSC-208ENST00000533897 CD109Q6YHK3 1445 aa5.83□□□□□ -1.48
CTSC-208ENST00000533897 PUS7Q96PZ0 661 aaKnown RBP5.83□□□□□ -1.48
CTSC-208ENST00000533897 NGEFQ8N5V2 710 aa5.83□□□□□ -1.48
CTSC-208ENST00000533897 N4BP2Q86UW6 1770 aaPredicted RBP5.83□□□□□ -1.48
CTSC-208ENST00000533897 GOLGA2Q08379 1002 aa5.82□□□□□ -1.48
CTSC-208ENST00000533897 CCDC27Q2M243 656 aa5.82□□□□□ -1.48
CTSC-208ENST00000533897 ZBTB47Q9UFB7 747 aaPredicted RBP5.82□□□□□ -1.48
CTSC-208ENST00000533897 RGPD1P0DJD0 1748 aa5.82□□□□□ -1.48
CTSC-208ENST00000533897 NALCNQ8IZF0 1738 aa5.82□□□□□ -1.48
CTSC-208ENST00000533897 IGHDP01880 384 aa5.82□□□□□ -1.48
CTSC-208ENST00000533897 POLR3GLQ9BT43 218 aa5.82□□□□□ -1.48
CTSC-208ENST00000533897 C3P01024 1663 aa5.82□□□□□ -1.48
CTSC-208ENST00000533897 TOPAZ1Q8N9V7 1692 aa5.82□□□□□ -1.48
CTSC-208ENST00000533897 C14orf93Q9H972 538 aaKnown RBP5.82□□□□□ -1.48
CTSC-208ENST00000533897 NEO1Q92859 1461 aa5.81□□□□□ -1.48
CTSC-208ENST00000533897 DLC1Q96QB1 1528 aa5.81□□□□□ -1.48
CTSC-208ENST00000533897 NSD3Q9BZ95 1437 aa5.81□□□□□ -1.48
CTSC-208ENST00000533897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.81□□□□□ -1.48
CTSC-208ENST00000533897 PNPLA6Q8IY17 1366 aa5.81□□□□□ -1.48
CTSC-208ENST00000533897 CDCA8Q53HL2 280 aa5.81□□□□□ -1.48
CTSC-208ENST00000533897 CFAP70Q5T0N1 1121 aa5.81□□□□□ -1.48
CTSC-208ENST00000533897 ARHGEF40Q8TER5 1519 aa5.81□□□□□ -1.48
CTSC-208ENST00000533897 NSD2O96028 1365 aa5.81□□□□□ -1.48
CTSC-208ENST00000533897 YEATS2Q9ULM3 1422 aa5.81□□□□□ -1.48
CTSC-208ENST00000533897 PDE3AQ14432 1141 aa5.8□□□□□ -1.48
CTSC-208ENST00000533897 WWC1Q8IX03 1113 aa5.8□□□□□ -1.48
CTSC-208ENST00000533897 ANTXR1Q9H6X2 564 aa5.8□□□□□ -1.48
CTSC-208ENST00000533897 MAP2P11137 1827 aaKnown RBP5.8□□□□□ -1.48
CTSC-208ENST00000533897 ABCC11Q96J66 1382 aa5.8□□□□□ -1.48
CTSC-208ENST00000533897 BCAR3O75815 825 aa5.8□□□□□ -1.48
CTSC-208ENST00000533897 FAM161AQ3B820 660 aa5.8□□□□□ -1.48
CTSC-208ENST00000533897 PPIP5K1Q6PFW1 1433 aa5.8□□□□□ -1.48
CTSC-208ENST00000533897 NCOA3Q9Y6Q9 1424 aa5.8□□□□□ -1.48
CTSC-208ENST00000533897 E9PSI1 815 aa5.8□□□□□ -1.48
CTSC-208ENST00000533897 ANKRD36BQ8N2N9 1353 aa5.8□□□□□ -1.48
CTSC-208ENST00000533897 LRRC7Q96NW7 1537 aa5.8□□□□□ -1.48
CTSC-208ENST00000533897 ALKQ9UM73 1620 aa5.8□□□□□ -1.48
CTSC-208ENST00000533897 NBR1Q14596 966 aa5.8□□□□□ -1.48
CTSC-208ENST00000533897 PLEKHF1Q96S99 279 aa5.8□□□□□ -1.48
CTSC-208ENST00000533897 KNSTRNQ9Y448 316 aa5.8□□□□□ -1.48
CTSC-208ENST00000533897 MARF1Q9Y4F3 1742 aaKnown RBP5.79□□□□□ -1.48
CTSC-208ENST00000533897 CNGB1Q14028 1251 aaPredicted RBP5.79□□□□□ -1.48
CTSC-208ENST00000533897 SPATA31D1Q6ZQQ2 1576 aa5.79□□□□□ -1.48
CTSC-208ENST00000533897 USP54Q70EL1 1684 aa5.78□□□□□ -1.48
CTSC-208ENST00000533897 APAF1O14727 1248 aa5.78□□□□□ -1.48
CTSC-208ENST00000533897 SEC24BO95487 1268 aa5.78□□□□□ -1.48
CTSC-208ENST00000533897 SALL2Q9Y467 1007 aaPredicted RBP5.78□□□□□ -1.48
CTSC-208ENST00000533897 RPGRIP1LQ68CZ1 1315 aa5.78□□□□□ -1.48
CTSC-208ENST00000533897 ERICH6Q7L0X2 663 aa5.78□□□□□ -1.48
CTSC-208ENST00000533897 RARSP54136 660 aaKnown RBP5.78□□□□□ -1.48
CTSC-208ENST00000533897 RIMS1Q86UR5 1692 aaKnown RBP5.78□□□□□ -1.48
CTSC-208ENST00000533897 RLBP1P12271 317 aa5.78□□□□□ -1.48
CTSC-208ENST00000533897 NFKBIBQ15653 356 aa5.77□□□□□ -1.49
CTSC-208ENST00000533897 WDR63Q8IWG1 891 aa5.77□□□□□ -1.49
CTSC-208ENST00000533897 DDIT3P35638 169 aa5.77□□□□□ -1.49
CTSC-208ENST00000533897 AAMPQ13685 434 aa5.77□□□□□ -1.49
CTSC-208ENST00000533897 CCDC146Q8IYE0 955 aa5.77□□□□□ -1.49
CTSC-208ENST00000533897 DDRGK1Q96HY6 314 aa5.77□□□□□ -1.49
CTSC-208ENST00000533897 AGLP35573 1532 aa5.77□□□□□ -1.49
CTSC-208ENST00000533897 CENPJQ9HC77 1338 aaPredicted RBP5.77□□□□□ -1.49
CTSC-208ENST00000533897 PPM1GO15355 546 aaPredicted RBP5.77□□□□□ -1.49
CTSC-208ENST00000533897 PIK3R4Q99570 1358 aa5.77□□□□□ -1.49
CTSC-208ENST00000533897 CGNL1Q0VF96 1302 aa5.76□□□□□ -1.49
CTSC-208ENST00000533897 FMN2Q9NZ56 1722 aa5.76□□□□□ -1.49
CTSC-208ENST00000533897 LRRC37A3O60309 1634 aa5.76□□□□□ -1.49
CTSC-208ENST00000533897 ITSN1Q15811 1721 aa5.76□□□□□ -1.49
CTSC-208ENST00000533897 IL27Q8NEV9 243 aa5.76□□□□□ -1.49
CTSC-208ENST00000533897 PCDHB15Q9Y5E8 787 aa5.76□□□□□ -1.49
CTSC-208ENST00000533897 A0A1W2PP64 1363 aa5.76□□□□□ -1.49
CTSC-208ENST00000533897 FAM135BQ49AJ0 1406 aa5.76□□□□□ -1.49
CTSC-208ENST00000533897 YTHDC2Q9H6S0 1430 aaKnown RBP5.76□□□□□ -1.49
CTSC-208ENST00000533897 PEAK1Q9H792 1746 aa5.76□□□□□ -1.49
CTSC-208ENST00000533897 CPS1P31327 1500 aa5.76□□□□□ -1.49
CTSC-208ENST00000533897 WDR43Q15061 677 aaKnown RBP eCLIP5.75□□□□□ -1.49
CTSC-208ENST00000533897 CLUAP1Q96AJ1 413 aa5.75□□□□□ -1.49
CTSC-208ENST00000533897 TNNQ9UQP3 1299 aa5.75□□□□□ -1.49
CTSC-208ENST00000533897 KIF3BO15066 747 aa5.75□□□□□ -1.49
CTSC-208ENST00000533897 NEFMP07197 916 aa5.75□□□□□ -1.49
CTSC-208ENST00000533897 RUNDC1Q96C34 613 aa5.75□□□□□ -1.49
CTSC-208ENST00000533897 ATP7BP35670 1465 aa5.75□□□□□ -1.49
CTSC-208ENST00000533897 ZNF692Q9BU19 519 aaPredicted RBP5.75□□□□□ -1.49
CTSC-208ENST00000533897 TRIM35Q9UPQ4 493 aa5.75□□□□□ -1.49
CTSC-208ENST00000533897 DIP2BQ9P265 1576 aa5.74□□□□□ -1.49
CTSC-208ENST00000533897 BRPF1P55201 1214 aaPredicted RBP5.74□□□□□ -1.49
CTSC-208ENST00000533897 TBC1D32Q96NH3 1257 aa5.74□□□□□ -1.49
CTSC-208ENST00000533897 LAS1LQ9Y4W2 734 aaKnown RBP5.74□□□□□ -1.49
CTSC-208ENST00000533897 GSE1Q14687 1217 aa5.74□□□□□ -1.49
CTSC-208ENST00000533897 CPSF1Q10570 1443 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms