RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 PHLPP1O60346 1717 aa30.98■■■□□ 2.55
VPS51-212ENST00000533656 ROBO2Q9HCK4 1378 aa30.95■■■□□ 2.55
VPS51-212ENST00000533656 PHF23Q9BUL5 403 aaPredicted RBP30.95■■■□□ 2.55
VPS51-212ENST00000533656 ZEB1P37275 1124 aaPredicted RBP30.94■■■□□ 2.54
VPS51-212ENST00000533656 CARD11Q9BXL7 1154 aa30.94■■■□□ 2.54
VPS51-212ENST00000533656 TRAK1Q9UPV9 953 aa30.93■■■□□ 2.54
VPS51-212ENST00000533656 EIF3AQ14152 1382 aaKnown RBP30.92■■■□□ 2.54
VPS51-212ENST00000533656 SLAIN2Q9P270 581 aa30.91■■■□□ 2.54
VPS51-212ENST00000533656 COL16A1Q07092 1604 aaPredicted RBP30.89■■■□□ 2.54
VPS51-212ENST00000533656 C14orf37Q86TY3 774 aa30.86■■■□□ 2.53
VPS51-212ENST00000533656 PRAM1Q96QH2 718 aa30.86■■■□□ 2.53
VPS51-212ENST00000533656 POGKQ9P215 609 aa30.86■■■□□ 2.53
VPS51-212ENST00000533656 ARHGEF28Q8N1W1 1705 aaKnown RBP30.86■■■□□ 2.53
VPS51-212ENST00000533656 RGS17Q9UGC6 210 aaPredicted RBP30.85■■■□□ 2.53
VPS51-212ENST00000533656 ADGRL3Q9HAR2 1447 aa30.83■■■□□ 2.53
VPS51-212ENST00000533656 WAPLQ7Z5K2 1190 aa30.82■■■□□ 2.52
VPS51-212ENST00000533656 PLEKHH1Q9ULM0 1364 aa30.81■■■□□ 2.52
VPS51-212ENST00000533656 CENPJQ9HC77 1338 aaPredicted RBP30.81■■■□□ 2.52
VPS51-212ENST00000533656 NALCNQ8IZF0 1738 aa30.81■■■□□ 2.52
VPS51-212ENST00000533656 DCCP43146 1447 aa30.8■■■□□ 2.52
VPS51-212ENST00000533656 C19orf44Q9H6X5 657 aa30.79■■■□□ 2.52
VPS51-212ENST00000533656 AHDC1Q5TGY3 1603 aaPredicted RBP30.79■■■□□ 2.52
VPS51-212ENST00000533656 USP47Q96K76 1375 aa30.77■■■□□ 2.52
VPS51-212ENST00000533656 CADPS2Q86UW7 1296 aa30.76■■■□□ 2.51
VPS51-212ENST00000533656 ATF3P18847 181 aa30.74■■■□□ 2.51
VPS51-212ENST00000533656 SBNO2Q9Y2G9 1366 aa30.74■■■□□ 2.51
VPS51-212ENST00000533656 ADGRB2O60241 1585 aa30.74■■■□□ 2.51
VPS51-212ENST00000533656 CDC42BPGQ6DT37 1551 aa30.73■■■□□ 2.51
VPS51-212ENST00000533656 JCADQ9P266 1359 aa30.72■■■□□ 2.51
VPS51-212ENST00000533656 SLC24A1O60721 1099 aa30.72■■■□□ 2.51
VPS51-212ENST00000533656 SAFB2Q14151 953 aaKnown RBP eCLIP30.72■■■□□ 2.51
VPS51-212ENST00000533656 SHPRHQ149N8 1683 aa30.71■■■□□ 2.51
VPS51-212ENST00000533656 MST1RQ04912 1400 aa30.7■■■□□ 2.5
VPS51-212ENST00000533656 EIF4G2P78344 907 aaKnown RBP eCLIP30.69■■■□□ 2.5
VPS51-212ENST00000533656 LRP6O75581 1613 aa30.69■■■□□ 2.5
VPS51-212ENST00000533656 NHSL1Q5SYE7 1610 aa30.69■■■□□ 2.5
VPS51-212ENST00000533656 QRICH2Q9H0J4 1663 aa30.68■■■□□ 2.5
VPS51-212ENST00000533656 BRINP3Q76B58 766 aa30.68■■■□□ 2.5
VPS51-212ENST00000533656 MINK1Q8N4C8 1332 aaPredicted RBP30.67■■■□□ 2.5
VPS51-212ENST00000533656 ST20-MTHFSA0A0A6YYL1 179 aa30.65■■■□□ 2.5
VPS51-212ENST00000533656 POTEAQ6S8J7 498 aa30.65■■■□□ 2.5
VPS51-212ENST00000533656 WASLO00401 505 aaPredicted RBP30.62■■■□□ 2.49
VPS51-212ENST00000533656 HIRIP3Q9BW71 556 aaPredicted RBP30.61■■■□□ 2.49
VPS51-212ENST00000533656 EVC2Q86UK5 1308 aa30.6■■■□□ 2.49
VPS51-212ENST00000533656 TESK2Q96S53 571 aa30.59■■■□□ 2.49
VPS51-212ENST00000533656 ANKARQ7Z5J8 1434 aa30.58■■■□□ 2.49
VPS51-212ENST00000533656 HSPA5P11021 654 aaKnown RBP30.58■■■□□ 2.49
VPS51-212ENST00000533656 FMN2Q9NZ56 1722 aa30.57■■■□□ 2.48
VPS51-212ENST00000533656 TULP4Q9NRJ4 1543 aa30.56■■■□□ 2.48
VPS51-212ENST00000533656 SPATA31A6Q5VVP1 1343 aa30.54■■■□□ 2.48
VPS51-212ENST00000533656 CDK19Q9BWU1 502 aa30.54■■■□□ 2.48
VPS51-212ENST00000533656 C1orf167Q5SNV9 1468 aa30.54■■■□□ 2.48
VPS51-212ENST00000533656 TMF1P82094 1093 aa30.53■■■□□ 2.48
VPS51-212ENST00000533656 DDX17Q92841 729 aaKnown RBP30.53■■■□□ 2.48
VPS51-212ENST00000533656 PUS7Q96PZ0 661 aaKnown RBP30.52■■■□□ 2.48
VPS51-212ENST00000533656 SRPK2P78362 688 aaKnown RBP30.5■■■□□ 2.47
VPS51-212ENST00000533656 CDCA8Q53HL2 280 aa30.49■■■□□ 2.47
VPS51-212ENST00000533656 ATP7BP35670 1465 aa30.48■■■□□ 2.47
VPS51-212ENST00000533656 ATAD2Q6PL18 1390 aa30.47■■■□□ 2.47
VPS51-212ENST00000533656 NUDT16Q96DE0 195 aaKnown RBP30.45■■■□□ 2.47
VPS51-212ENST00000533656 NUTM2FA1L443 756 aa30.44■■■□□ 2.46
VPS51-212ENST00000533656 MEX3CQ5U5Q3 659 aaKnown RBP30.44■■■□□ 2.46
VPS51-212ENST00000533656 CABP2Q9NPB3 220 aa30.44■■■□□ 2.46
VPS51-212ENST00000533656 CCDC61Q9Y6R9 512 aa30.44■■■□□ 2.46
VPS51-212ENST00000533656 PRR36Q9H6K5 1346 aa30.44■■■□□ 2.46
VPS51-212ENST00000533656 USP32Q8NFA0 1604 aa30.44■■■□□ 2.46
VPS51-212ENST00000533656 NUTM2BA6NNL0 878 aaPredicted RBP30.42■■■□□ 2.46
VPS51-212ENST00000533656 NUTM2EB1AL46 878 aaPredicted RBP30.42■■■□□ 2.46
VPS51-212ENST00000533656 NUTM2AQ8IVF1 878 aaPredicted RBP30.42■■■□□ 2.46
VPS51-212ENST00000533656 ESCO1Q5FWF5 840 aa30.41■■■□□ 2.46
VPS51-212ENST00000533656 ITSN1Q15811 1721 aa30.41■■■□□ 2.46
VPS51-212ENST00000533656 PNPLA6Q8IY17 1366 aa30.41■■■□□ 2.46
VPS51-212ENST00000533656 ORAI2Q96SN7 254 aa30.4■■■□□ 2.46
VPS51-212ENST00000533656 KIF1AQ12756 1690 aa30.39■■■□□ 2.46
VPS51-212ENST00000533656 PHF8Q9UPP1 1060 aa30.38■■■□□ 2.45
VPS51-212ENST00000533656 TOPAZ1Q8N9V7 1692 aa30.38■■■□□ 2.45
VPS51-212ENST00000533656 NINLQ9Y2I6 1382 aa30.38■■■□□ 2.45
VPS51-212ENST00000533656 LRRC59Q96AG4 307 aaKnown RBP30.36■■■□□ 2.45
VPS51-212ENST00000533656 PPIP5K1Q6PFW1 1433 aa30.35■■■□□ 2.45
VPS51-212ENST00000533656 PLEKHG3A1L390 1219 aa30.34■■■□□ 2.45
VPS51-212ENST00000533656 NPHP3Q7Z494 1330 aa30.32■■■□□ 2.44
VPS51-212ENST00000533656 ZNF772Q68DY9 489 aaPredicted RBP30.31■■■□□ 2.44
VPS51-212ENST00000533656 RGPD8O14715 1765 aaPredicted RBP30.31■■■□□ 2.44
VPS51-212ENST00000533656 SOS2Q07890 1332 aaPredicted RBP30.3■■■□□ 2.44
VPS51-212ENST00000533656 POLR3AO14802 1390 aaPredicted RBP30.29■■■□□ 2.44
VPS51-212ENST00000533656 AFF2P51816 1311 aa30.29■■■□□ 2.44
VPS51-212ENST00000533656 CABP1Q9NZU7 370 aa30.29■■■□□ 2.44
VPS51-212ENST00000533656 COL22A1Q8NFW1 1626 aaPredicted RBP30.29■■■□□ 2.44
VPS51-212ENST00000533656 NGDNQ8NEJ9 315 aaKnown RBP30.28■■■□□ 2.44
VPS51-212ENST00000533656 PMFBP1Q8TBY8 1022 aa30.28■■■□□ 2.44
VPS51-212ENST00000533656 PXDNQ92626 1479 aa30.25■■■□□ 2.43
VPS51-212ENST00000533656 FOXO3O43524 673 aa30.25■■■□□ 2.43
VPS51-212ENST00000533656 ACEP12821 1306 aa30.24■■■□□ 2.43
VPS51-212ENST00000533656 TMC1Q8TDI8 760 aa30.24■■■□□ 2.43
VPS51-212ENST00000533656 BRD4O60885 1362 aaPredicted RBP30.24■■■□□ 2.43
VPS51-212ENST00000533656 KIF7Q2M1P5 1343 aa30.23■■■□□ 2.43
VPS51-212ENST00000533656 C8orf37Q96NL8 207 aa30.23■■■□□ 2.43
VPS51-212ENST00000533656 ZNF692Q9BU19 519 aaPredicted RBP30.23■■■□□ 2.43
VPS51-212ENST00000533656 C11orf95C9JLR9 678 aaPredicted RBP30.22■■■□□ 2.43
VPS51-212ENST00000533656 TERF2IPQ9NYB0 399 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms