RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 MINK1Q8N4C8 1332 aaPredicted RBP16.74■□□□□ 0.27
COMMD9-208ENST00000533643 SBNO2Q9Y2G9 1366 aa16.73■□□□□ 0.27
COMMD9-208ENST00000533643 NCOA3Q9Y6Q9 1424 aa16.72■□□□□ 0.27
COMMD9-208ENST00000533643 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.72■□□□□ 0.27
COMMD9-208ENST00000533643 QRICH2Q9H0J4 1663 aa16.72■□□□□ 0.27
COMMD9-208ENST00000533643 C14orf37Q86TY3 774 aa16.71■□□□□ 0.27
COMMD9-208ENST00000533643 ADGRL3Q9HAR2 1447 aa16.7■□□□□ 0.26
COMMD9-208ENST00000533643 C19orf44Q9H6X5 657 aa16.69■□□□□ 0.26
COMMD9-208ENST00000533643 WASLO00401 505 aaPredicted RBP16.68■□□□□ 0.26
COMMD9-208ENST00000533643 SLC24A1O60721 1099 aa16.68■□□□□ 0.26
COMMD9-208ENST00000533643 DISP3Q9P2K9 1392 aa16.67■□□□□ 0.26
COMMD9-208ENST00000533643 C11orf95C9JLR9 678 aaPredicted RBP16.67■□□□□ 0.26
COMMD9-208ENST00000533643 TMF1P82094 1093 aa16.67■□□□□ 0.26
COMMD9-208ENST00000533643 CDK19Q9BWU1 502 aa16.67■□□□□ 0.26
COMMD9-208ENST00000533643 XIRP1Q702N8 1843 aaKnown RBP16.67■□□□□ 0.26
COMMD9-208ENST00000533643 ADGRB2O60241 1585 aa16.67■□□□□ 0.26
COMMD9-208ENST00000533643 NALCNQ8IZF0 1738 aa16.67■□□□□ 0.26
COMMD9-208ENST00000533643 EVC2Q86UK5 1308 aa16.67■□□□□ 0.26
COMMD9-208ENST00000533643 TULP4Q9NRJ4 1543 aa16.66■□□□□ 0.26
COMMD9-208ENST00000533643 MSH6P52701 1360 aa16.65■□□□□ 0.26
COMMD9-208ENST00000533643 CABP2Q9NPB3 220 aa16.64■□□□□ 0.25
COMMD9-208ENST00000533643 ATF3P18847 181 aa16.63■□□□□ 0.25
COMMD9-208ENST00000533643 SRPK2P78362 688 aaKnown RBP16.63■□□□□ 0.25
COMMD9-208ENST00000533643 CDC42BPGQ6DT37 1551 aa16.63■□□□□ 0.25
COMMD9-208ENST00000533643 DCCP43146 1447 aa16.62■□□□□ 0.25
COMMD9-208ENST00000533643 CERKQ8TCT0 537 aa16.62■□□□□ 0.25
COMMD9-208ENST00000533643 PUS7Q96PZ0 661 aaKnown RBP16.62■□□□□ 0.25
COMMD9-208ENST00000533643 NUTM2FA1L443 756 aa16.61■□□□□ 0.25
COMMD9-208ENST00000533643 CDCA8Q53HL2 280 aa16.61■□□□□ 0.25
COMMD9-208ENST00000533643 CADPS2Q86UW7 1296 aa16.61■□□□□ 0.25
COMMD9-208ENST00000533643 KIF7Q2M1P5 1343 aa16.61■□□□□ 0.25
COMMD9-208ENST00000533643 PRR36Q9H6K5 1346 aa16.61■□□□□ 0.25
COMMD9-208ENST00000533643 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
COMMD9-208ENST00000533643 NUDT16Q96DE0 195 aaKnown RBP16.6■□□□□ 0.25
COMMD9-208ENST00000533643 WASHC2AQ641Q2 1341 aa16.59■□□□□ 0.25
COMMD9-208ENST00000533643 CCDC7Q96M83 1385 aa16.59■□□□□ 0.25
COMMD9-208ENST00000533643 FMN2Q9NZ56 1722 aa16.59■□□□□ 0.25
COMMD9-208ENST00000533643 POLR3GLQ9BT43 218 aa16.58■□□□□ 0.24
COMMD9-208ENST00000533643 MST1RQ04912 1400 aa16.58■□□□□ 0.24
COMMD9-208ENST00000533643 ANKARQ7Z5J8 1434 aa16.58■□□□□ 0.24
COMMD9-208ENST00000533643 IQSEC2Q5JU85 1478 aa16.58■□□□□ 0.24
COMMD9-208ENST00000533643 ATP7BP35670 1465 aa16.57■□□□□ 0.24
COMMD9-208ENST00000533643 ATAD2Q6PL18 1390 aa16.57■□□□□ 0.24
COMMD9-208ENST00000533643 USP32Q8NFA0 1604 aa16.56■□□□□ 0.24
COMMD9-208ENST00000533643 C1orf167Q5SNV9 1468 aa16.56■□□□□ 0.24
COMMD9-208ENST00000533643 SLAIN2Q9P270 581 aa16.56■□□□□ 0.24
COMMD9-208ENST00000533643 CCDC61Q9Y6R9 512 aa16.56■□□□□ 0.24
COMMD9-208ENST00000533643 CABP1Q9NZU7 370 aa16.54■□□□□ 0.24
COMMD9-208ENST00000533643 PLEKHG3A1L390 1219 aa16.53■□□□□ 0.24
COMMD9-208ENST00000533643 ESCO1Q5FWF5 840 aa16.53■□□□□ 0.24
COMMD9-208ENST00000533643 TMC1Q8TDI8 760 aa16.53■□□□□ 0.24
COMMD9-208ENST00000533643 ORAI2Q96SN7 254 aa16.53■□□□□ 0.24
COMMD9-208ENST00000533643 SLC12A5Q9H2X9 1139 aa16.53■□□□□ 0.24
COMMD9-208ENST00000533643 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
COMMD9-208ENST00000533643 PHF8Q9UPP1 1060 aa16.52■□□□□ 0.24
COMMD9-208ENST00000533643 UBAP1LF5GYI3 381 aa16.51■□□□□ 0.23
COMMD9-208ENST00000533643 TOM1O60784 492 aa16.51■□□□□ 0.23
COMMD9-208ENST00000533643 TOPAZ1Q8N9V7 1692 aa16.5■□□□□ 0.23
COMMD9-208ENST00000533643 BRINP3Q76B58 766 aa16.5■□□□□ 0.23
COMMD9-208ENST00000533643 PMFBP1Q8TBY8 1022 aa16.5■□□□□ 0.23
COMMD9-208ENST00000533643 RGPD8O14715 1765 aaPredicted RBP16.5■□□□□ 0.23
COMMD9-208ENST00000533643 NINLQ9Y2I6 1382 aa16.5■□□□□ 0.23
COMMD9-208ENST00000533643 ACEP12821 1306 aa16.48■□□□□ 0.23
COMMD9-208ENST00000533643 NGDNQ8NEJ9 315 aaKnown RBP16.48■□□□□ 0.23
COMMD9-208ENST00000533643 MYOM1P52179 1685 aa16.48■□□□□ 0.23
COMMD9-208ENST00000533643 PANK3Q9H999 370 aa16.47■□□□□ 0.23
COMMD9-208ENST00000533643 POLR3AO14802 1390 aaPredicted RBP16.47■□□□□ 0.23
COMMD9-208ENST00000533643 ITSN1Q15811 1721 aa16.47■□□□□ 0.23
COMMD9-208ENST00000533643 CD163L1Q9NR16 1453 aa16.47■□□□□ 0.23
COMMD9-208ENST00000533643 CPSF1Q10570 1443 aaKnown RBP16.46■□□□□ 0.23
COMMD9-208ENST00000533643 DDX10Q13206 875 aaKnown RBP16.46■□□□□ 0.23
COMMD9-208ENST00000533643 TERF2IPQ9NYB0 399 aa16.46■□□□□ 0.23
COMMD9-208ENST00000533643 FOXO3O43524 673 aa16.45■□□□□ 0.22
COMMD9-208ENST00000533643 PIP4K2BP78356 416 aa16.45■□□□□ 0.22
COMMD9-208ENST00000533643 HDGFL2Q7Z4V5 671 aaPredicted RBP16.45■□□□□ 0.22
COMMD9-208ENST00000533643 A0A1W2PP64 1363 aa16.45■□□□□ 0.22
COMMD9-208ENST00000533643 ANKRD36BQ8N2N9 1353 aa16.45■□□□□ 0.22
COMMD9-208ENST00000533643 DDX17Q92841 729 aaKnown RBP16.44■□□□□ 0.22
COMMD9-208ENST00000533643 ZNF692Q9BU19 519 aaPredicted RBP16.44■□□□□ 0.22
COMMD9-208ENST00000533643 CARD14Q9BXL6 1004 aa16.44■□□□□ 0.22
COMMD9-208ENST00000533643 KIF1AQ12756 1690 aa16.43■□□□□ 0.22
COMMD9-208ENST00000533643 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
COMMD9-208ENST00000533643 KTN1Q86UP2 1357 aaKnown RBP16.42■□□□□ 0.22
COMMD9-208ENST00000533643 PSME1Q06323 249 aa16.42■□□□□ 0.22
COMMD9-208ENST00000533643 ROBO1Q9Y6N7 1651 aa16.42■□□□□ 0.22
COMMD9-208ENST00000533643 NPHP3Q7Z494 1330 aa16.42■□□□□ 0.22
COMMD9-208ENST00000533643 XPCQ01831 940 aaPredicted RBP16.41■□□□□ 0.22
COMMD9-208ENST00000533643 KRT28Q7Z3Y7 464 aa16.41■□□□□ 0.22
COMMD9-208ENST00000533643 USP6P35125 1406 aa16.4■□□□□ 0.22
COMMD9-208ENST00000533643 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
COMMD9-208ENST00000533643 AKAP12Q02952 1782 aa16.39■□□□□ 0.21
COMMD9-208ENST00000533643 SSH2Q76I76 1423 aa16.39■□□□□ 0.21
COMMD9-208ENST00000533643 EDC4Q6P2E9 1401 aaKnown RBP16.38■□□□□ 0.21
COMMD9-208ENST00000533643 PXDNQ92626 1479 aa16.38■□□□□ 0.21
COMMD9-208ENST00000533643 SOS2Q07890 1332 aaPredicted RBP16.38■□□□□ 0.21
COMMD9-208ENST00000533643 TTC21BQ7Z4L5 1316 aa16.38■□□□□ 0.21
COMMD9-208ENST00000533643 NSD3Q9BZ95 1437 aa16.37■□□□□ 0.21
COMMD9-208ENST00000533643 NHSL1Q5SYE7 1610 aa16.37■□□□□ 0.21
COMMD9-208ENST00000533643 AHDC1Q5TGY3 1603 aaPredicted RBP16.37■□□□□ 0.21
COMMD9-208ENST00000533643 BRD4O60885 1362 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms