RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 POGKQ9P215 609 aa29.95■■■□□ 2.39
VPS51-211ENST00000533487 TRAK1Q9UPV9 953 aa29.95■■■□□ 2.39
VPS51-211ENST00000533487 SCAF1Q9H7N4 1312 aaKnown RBP29.95■■■□□ 2.38
VPS51-211ENST00000533487 PRAM1Q96QH2 718 aa29.94■■■□□ 2.38
VPS51-211ENST00000533487 ROBO1Q9Y6N7 1651 aa29.94■■■□□ 2.38
VPS51-211ENST00000533487 GPRASP1Q5JY77 1395 aa29.93■■■□□ 2.38
VPS51-211ENST00000533487 NBPF1Q3BBV0 1214 aa29.93■■■□□ 2.38
VPS51-211ENST00000533487 MST1RQ04912 1400 aa29.93■■■□□ 2.38
VPS51-211ENST00000533487 ADGRB2O60241 1585 aa29.93■■■□□ 2.38
VPS51-211ENST00000533487 ROCK2O75116 1388 aaKnown RBP29.92■■■□□ 2.38
VPS51-211ENST00000533487 PLEKHH1Q9ULM0 1364 aa29.92■■■□□ 2.38
VPS51-211ENST00000533487 RALGAPBQ86X10 1494 aa29.92■■■□□ 2.38
VPS51-211ENST00000533487 NBPF8Q3BBV2 869 aa29.9■■■□□ 2.38
VPS51-211ENST00000533487 FMN2Q9NZ56 1722 aa29.88■■■□□ 2.37
VPS51-211ENST00000533487 EIF3AQ14152 1382 aaKnown RBP29.87■■■□□ 2.37
VPS51-211ENST00000533487 C1orf167Q5SNV9 1468 aa29.85■■■□□ 2.37
VPS51-211ENST00000533487 AHDC1Q5TGY3 1603 aaPredicted RBP29.81■■■□□ 2.36
VPS51-211ENST00000533487 CENPJQ9HC77 1338 aaPredicted RBP29.8■■■□□ 2.36
VPS51-211ENST00000533487 ANKARQ7Z5J8 1434 aa29.79■■■□□ 2.36
VPS51-211ENST00000533487 SAFB2Q14151 953 aaKnown RBP eCLIP29.78■■■□□ 2.36
VPS51-211ENST00000533487 BRINP3Q76B58 766 aa29.78■■■□□ 2.36
VPS51-211ENST00000533487 CARD11Q9BXL7 1154 aa29.78■■■□□ 2.36
VPS51-211ENST00000533487 QRICH2Q9H0J4 1663 aa29.77■■■□□ 2.36
VPS51-211ENST00000533487 HSPA1LP34931 641 aa29.77■■■□□ 2.36
VPS51-211ENST00000533487 NHSL1Q5SYE7 1610 aa29.77■■■□□ 2.36
VPS51-211ENST00000533487 PHLPP1O60346 1717 aa29.76■■■□□ 2.35
VPS51-211ENST00000533487 KIF1AQ12756 1690 aa29.75■■■□□ 2.35
VPS51-211ENST00000533487 WASLO00401 505 aaPredicted RBP29.74■■■□□ 2.35
VPS51-211ENST00000533487 MINK1Q8N4C8 1332 aaPredicted RBP29.73■■■□□ 2.35
VPS51-211ENST00000533487 TULP4Q9NRJ4 1543 aa29.73■■■□□ 2.35
VPS51-211ENST00000533487 SBNO2Q9Y2G9 1366 aa29.72■■■□□ 2.35
VPS51-211ENST00000533487 SLC24A1O60721 1099 aa29.7■■■□□ 2.35
VPS51-211ENST00000533487 ITSN1Q15811 1721 aa29.7■■■□□ 2.34
VPS51-211ENST00000533487 COL16A1Q07092 1604 aaPredicted RBP29.69■■■□□ 2.34
VPS51-211ENST00000533487 RGPD8O14715 1765 aaPredicted RBP29.69■■■□□ 2.34
VPS51-211ENST00000533487 ESCO1Q5FWF5 840 aa29.68■■■□□ 2.34
VPS51-211ENST00000533487 HIRIP3Q9BW71 556 aaPredicted RBP29.68■■■□□ 2.34
VPS51-211ENST00000533487 USP32Q8NFA0 1604 aa29.67■■■□□ 2.34
VPS51-211ENST00000533487 ORAI2Q96SN7 254 aa29.66■■■□□ 2.34
VPS51-211ENST00000533487 NPHP3Q7Z494 1330 aa29.66■■■□□ 2.34
VPS51-211ENST00000533487 EVC2Q86UK5 1308 aa29.63■■■□□ 2.33
VPS51-211ENST00000533487 CDK19Q9BWU1 502 aa29.62■■■□□ 2.33
VPS51-211ENST00000533487 PHF8Q9UPP1 1060 aa29.61■■■□□ 2.33
VPS51-211ENST00000533487 ATP7BP35670 1465 aa29.61■■■□□ 2.33
VPS51-211ENST00000533487 NUTM2FA1L443 756 aa29.6■■■□□ 2.33
VPS51-211ENST00000533487 LRRC59Q96AG4 307 aaKnown RBP29.6■■■□□ 2.33
VPS51-211ENST00000533487 SOS2Q07890 1332 aaPredicted RBP29.6■■■□□ 2.33
VPS51-211ENST00000533487 JCADQ9P266 1359 aa29.6■■■□□ 2.33
VPS51-211ENST00000533487 SHPRHQ149N8 1683 aa29.59■■■□□ 2.33
VPS51-211ENST00000533487 TOPAZ1Q8N9V7 1692 aa29.58■■■□□ 2.33
VPS51-211ENST00000533487 NUDT16Q96DE0 195 aaKnown RBP29.57■■■□□ 2.32
VPS51-211ENST00000533487 CCDC61Q9Y6R9 512 aa29.57■■■□□ 2.32
VPS51-211ENST00000533487 USP47Q96K76 1375 aa29.56■■■□□ 2.32
VPS51-211ENST00000533487 PRR36Q9H6K5 1346 aa29.56■■■□□ 2.32
VPS51-211ENST00000533487 PXDNQ92626 1479 aa29.55■■■□□ 2.32
VPS51-211ENST00000533487 SRPK2P78362 688 aaKnown RBP29.54■■■□□ 2.32
VPS51-211ENST00000533487 PUS7Q96PZ0 661 aaKnown RBP29.54■■■□□ 2.32
VPS51-211ENST00000533487 FOXO3O43524 673 aa29.53■■■□□ 2.32
VPS51-211ENST00000533487 PSME1Q06323 249 aa29.52■■■□□ 2.32
VPS51-211ENST00000533487 ATAD2Q6PL18 1390 aa29.51■■■□□ 2.31
VPS51-211ENST00000533487 SPATA31A6Q5VVP1 1343 aa29.5■■■□□ 2.31
VPS51-211ENST00000533487 ST20-MTHFSA0A0A6YYL1 179 aa29.5■■■□□ 2.31
VPS51-211ENST00000533487 PLEKHG3A1L390 1219 aa29.5■■■□□ 2.31
VPS51-211ENST00000533487 SBNO1A3KN83 1393 aa29.47■■■□□ 2.31
VPS51-211ENST00000533487 POLR3AO14802 1390 aaPredicted RBP29.47■■■□□ 2.31
VPS51-211ENST00000533487 KRT28Q7Z3Y7 464 aa29.46■■■□□ 2.31
VPS51-211ENST00000533487 DDX17Q92841 729 aaKnown RBP29.46■■■□□ 2.31
VPS51-211ENST00000533487 TESK2Q96S53 571 aa29.46■■■□□ 2.31
VPS51-211ENST00000533487 CABP2Q9NPB3 220 aa29.46■■■□□ 2.31
VPS51-211ENST00000533487 NGDNQ8NEJ9 315 aaKnown RBP29.45■■■□□ 2.31
VPS51-211ENST00000533487 PMFBP1Q8TBY8 1022 aa29.45■■■□□ 2.31
VPS51-211ENST00000533487 COL22A1Q8NFW1 1626 aaPredicted RBP29.45■■■□□ 2.3
VPS51-211ENST00000533487 PPIP5K1Q6PFW1 1433 aa29.45■■■□□ 2.3
VPS51-211ENST00000533487 BRD4O60885 1362 aaPredicted RBP29.44■■■□□ 2.3
VPS51-211ENST00000533487 PNPLA6Q8IY17 1366 aa29.43■■■□□ 2.3
VPS51-211ENST00000533487 TRPM3Q9HCF6 1732 aaPredicted RBP29.42■■■□□ 2.3
VPS51-211ENST00000533487 EIF4G2P78344 907 aaKnown RBP eCLIP29.41■■■□□ 2.3
VPS51-211ENST00000533487 MED1Q15648 1581 aaPredicted RBP29.41■■■□□ 2.3
VPS51-211ENST00000533487 CDCA8Q53HL2 280 aa29.41■■■□□ 2.3
VPS51-211ENST00000533487 SPATA31A3Q5VYP0 1347 aa29.41■■■□□ 2.3
VPS51-211ENST00000533487 TNS3Q68CZ2 1445 aa29.4■■■□□ 2.3
VPS51-211ENST00000533487 TMF1P82094 1093 aa29.4■■■□□ 2.3
VPS51-211ENST00000533487 ARHGEF10O15013 1369 aa29.39■■■□□ 2.3
VPS51-211ENST00000533487 NINLQ9Y2I6 1382 aa29.39■■■□□ 2.3
VPS51-211ENST00000533487 ACEP12821 1306 aa29.39■■■□□ 2.3
VPS51-211ENST00000533487 ZNF692Q9BU19 519 aaPredicted RBP29.36■■■□□ 2.29
VPS51-211ENST00000533487 ALS2Q96Q42 1657 aa29.35■■■□□ 2.29
VPS51-211ENST00000533487 XPCQ01831 940 aaPredicted RBP29.35■■■□□ 2.29
VPS51-211ENST00000533487 CABP1Q9NZU7 370 aa29.35■■■□□ 2.29
VPS51-211ENST00000533487 AKAP12Q02952 1782 aa29.34■■■□□ 2.29
VPS51-211ENST00000533487 USP6P35125 1406 aa29.28■■■□□ 2.28
VPS51-211ENST00000533487 CPSF1Q10570 1443 aaKnown RBP29.28■■■□□ 2.28
VPS51-211ENST00000533487 DISP3Q9P2K9 1392 aa29.27■■■□□ 2.28
VPS51-211ENST00000533487 LRP6O75581 1613 aa29.27■■■□□ 2.28
VPS51-211ENST00000533487 MON2Q7Z3U7 1717 aa29.26■■■□□ 2.27
VPS51-211ENST00000533487 HSPA5P11021 654 aaKnown RBP29.26■■■□□ 2.27
VPS51-211ENST00000533487 TERF2IPQ9NYB0 399 aa29.26■■■□□ 2.27
VPS51-211ENST00000533487 MARF1Q9Y4F3 1742 aaKnown RBP29.25■■■□□ 2.27
VPS51-211ENST00000533487 PAK3O75914 559 aaPredicted RBP29.23■■■□□ 2.27
VPS51-211ENST00000533487 HDGFL2Q7Z4V5 671 aaPredicted RBP29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms