RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-215	ENST00000533408	HSPA5	P11021	654 aa	Known RBP	29.57	■■■□□ 2.32
PTP4A2-215	ENST00000533408	STRCP1	A6NGW2	1772 aa		29.56	■■■□□ 2.32
PTP4A2-215	ENST00000533408	PLEKHH1	Q9ULM0	1364 aa		29.55	■■■□□ 2.32
PTP4A2-215	ENST00000533408	CDCA8	Q53HL2	280 aa		29.55	■■■□□ 2.32
PTP4A2-215	ENST00000533408	ADGRL3	Q9HAR2	1447 aa		29.54	■■■□□ 2.32
PTP4A2-215	ENST00000533408	EVC2	Q86UK5	1308 aa		29.54	■■■□□ 2.32
PTP4A2-215	ENST00000533408	ATF3	P18847	181 aa		29.54	■■■□□ 2.32
PTP4A2-215	ENST00000533408	MINK1	Q8N4C8	1332 aa	Predicted RBP	29.53	■■■□□ 2.32
PTP4A2-215	ENST00000533408	TMF1	P82094	1093 aa		29.53	■■■□□ 2.32
PTP4A2-215	ENST00000533408	CADPS2	Q86UW7	1296 aa		29.53	■■■□□ 2.32
PTP4A2-215	ENST00000533408	RBM33	Q96EV2	1170 aa	Known RBP	29.51	■■■□□ 2.31
PTP4A2-215	ENST00000533408	DCC	P43146	1447 aa		29.51	■■■□□ 2.31
PTP4A2-215	ENST00000533408	IQSEC2	Q5JU85	1478 aa		29.5	■■■□□ 2.31
PTP4A2-215	ENST00000533408	WASL	O00401	505 aa	Predicted RBP	29.48	■■■□□ 2.31
PTP4A2-215	ENST00000533408	CERK	Q8TCT0	537 aa		29.48	■■■□□ 2.31
PTP4A2-215	ENST00000533408	PUS7	Q96PZ0	661 aa	Known RBP	29.48	■■■□□ 2.31
PTP4A2-215	ENST00000533408	TESK2	Q96S53	571 aa		29.48	■■■□□ 2.31
PTP4A2-215	ENST00000533408	HIRIP3	Q9BW71	556 aa	Predicted RBP	29.47	■■■□□ 2.31
PTP4A2-215	ENST00000533408	QRICH2	Q9H0J4	1663 aa		29.47	■■■□□ 2.31
PTP4A2-215	ENST00000533408	SRPK2	P78362	688 aa	Known RBP	29.44	■■■□□ 2.3
PTP4A2-215	ENST00000533408	CDK19	Q9BWU1	502 aa		29.44	■■■□□ 2.3
PTP4A2-215	ENST00000533408	ADGRB2	O60241	1585 aa		29.43	■■■□□ 2.3
PTP4A2-215	ENST00000533408	CDC42BPG	Q6DT37	1551 aa		29.42	■■■□□ 2.3
PTP4A2-215	ENST00000533408	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.42	■■■□□ 2.3
PTP4A2-215	ENST00000533408	TOM1	O60784	492 aa		29.41	■■■□□ 2.3
PTP4A2-215	ENST00000533408	NALCN	Q8IZF0	1738 aa		29.37	■■■□□ 2.29
PTP4A2-215	ENST00000533408	ATAD2	Q6PL18	1390 aa		29.37	■■■□□ 2.29
PTP4A2-215	ENST00000533408	ANKAR	Q7Z5J8	1434 aa		29.37	■■■□□ 2.29
PTP4A2-215	ENST00000533408	SLAIN2	Q9P270	581 aa		29.35	■■■□□ 2.29
PTP4A2-215	ENST00000533408	XIRP1	Q702N8	1843 aa	Known RBP	29.34	■■■□□ 2.29
PTP4A2-215	ENST00000533408	CCDC61	Q9Y6R9	512 aa		29.34	■■■□□ 2.29
PTP4A2-215	ENST00000533408	NUDT16	Q96DE0	195 aa	Known RBP	29.33	■■■□□ 2.29
PTP4A2-215	ENST00000533408	CABP2	Q9NPB3	220 aa		29.33	■■■□□ 2.29
PTP4A2-215	ENST00000533408	TULP4	Q9NRJ4	1543 aa		29.31	■■■□□ 2.28
PTP4A2-215	ENST00000533408	DISP3	Q9P2K9	1392 aa		29.29	■■■□□ 2.28
PTP4A2-215	ENST00000533408	NINL	Q9Y2I6	1382 aa		29.29	■■■□□ 2.28
PTP4A2-215	ENST00000533408	UBAP1L	F5GYI3	381 aa		29.29	■■■□□ 2.28
PTP4A2-215	ENST00000533408	MST1R	Q04912	1400 aa		29.28	■■■□□ 2.28
PTP4A2-215	ENST00000533408	NUTM2F	A1L443	756 aa		29.27	■■■□□ 2.28
PTP4A2-215	ENST00000533408	ESCO1	Q5FWF5	840 aa		29.27	■■■□□ 2.28
PTP4A2-215	ENST00000533408	FMN2	Q9NZ56	1722 aa		29.27	■■■□□ 2.28
PTP4A2-215	ENST00000533408	C1orf167	Q5SNV9	1468 aa		29.26	■■■□□ 2.27
PTP4A2-215	ENST00000533408	ZNF316	A6NFI3	1004 aa	Predicted RBP	29.24	■■■□□ 2.27
PTP4A2-215	ENST00000533408	POLR3GL	Q9BT43	218 aa		29.24	■■■□□ 2.27
PTP4A2-215	ENST00000533408	TMC1	Q8TDI8	760 aa		29.23	■■■□□ 2.27
PTP4A2-215	ENST00000533408	PLEKHG3	A1L390	1219 aa		29.22	■■■□□ 2.27
PTP4A2-215	ENST00000533408	TERF2IP	Q9NYB0	399 aa		29.22	■■■□□ 2.27
PTP4A2-215	ENST00000533408	PHF8	Q9UPP1	1060 aa		29.22	■■■□□ 2.27
PTP4A2-215	ENST00000533408	PRR36	Q9H6K5	1346 aa		29.21	■■■□□ 2.27
PTP4A2-215	ENST00000533408	ATP7B	P35670	1465 aa		29.21	■■■□□ 2.27
PTP4A2-215	ENST00000533408	KIF7	Q2M1P5	1343 aa		29.2	■■■□□ 2.27
PTP4A2-215	ENST00000533408	ZNF692	Q9BU19	519 aa	Predicted RBP	29.2	■■■□□ 2.26
PTP4A2-215	ENST00000533408	CABP1	Q9NZU7	370 aa		29.2	■■■□□ 2.26
PTP4A2-215	ENST00000533408	PPIP5K1	Q6PFW1	1433 aa		29.2	■■■□□ 2.26
PTP4A2-215	ENST00000533408	CCDC7	Q96M83	1385 aa		29.19	■■■□□ 2.26
PTP4A2-215	ENST00000533408	C11orf95	C9JLR9	678 aa	Predicted RBP	29.19	■■■□□ 2.26
PTP4A2-215	ENST00000533408	NGDN	Q8NEJ9	315 aa	Known RBP	29.19	■■■□□ 2.26
PTP4A2-215	ENST00000533408	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	29.18	■■■□□ 2.26
PTP4A2-215	ENST00000533408	ORAI2	Q96SN7	254 aa		29.17	■■■□□ 2.26
PTP4A2-215	ENST00000533408	ITSN1	Q15811	1721 aa		29.17	■■■□□ 2.26
PTP4A2-215	ENST00000533408	BRINP3	Q76B58	766 aa		29.16	■■■□□ 2.26
PTP4A2-215	ENST00000533408	WASHC2A	Q641Q2	1341 aa		29.16	■■■□□ 2.26
PTP4A2-215	ENST00000533408	NPHP3	Q7Z494	1330 aa		29.15	■■■□□ 2.26
PTP4A2-215	ENST00000533408	SCAF1	Q9H7N4	1312 aa	Known RBP	29.14	■■■□□ 2.25
PTP4A2-215	ENST00000533408	PIP4K2B	P78356	416 aa		29.13	■■■□□ 2.25
PTP4A2-215	ENST00000533408	PSME1	Q06323	249 aa		29.13	■■■□□ 2.25
PTP4A2-215	ENST00000533408	PMFBP1	Q8TBY8	1022 aa		29.13	■■■□□ 2.25
PTP4A2-215	ENST00000533408	SLC12A5	Q9H2X9	1139 aa		29.13	■■■□□ 2.25
PTP4A2-215	ENST00000533408	ACE	P12821	1306 aa		29.12	■■■□□ 2.25
PTP4A2-215	ENST00000533408	USP32	Q8NFA0	1604 aa		29.12	■■■□□ 2.25
PTP4A2-215	ENST00000533408	BRD4	O60885	1362 aa	Predicted RBP	29.12	■■■□□ 2.25
PTP4A2-215	ENST00000533408	KIF1A	Q12756	1690 aa		29.12	■■■□□ 2.25
PTP4A2-215	ENST00000533408	POLR3A	O14802	1390 aa	Predicted RBP	29.11	■■■□□ 2.25
PTP4A2-215	ENST00000533408	FOXO3	O43524	673 aa		29.09	■■■□□ 2.25
PTP4A2-215	ENST00000533408	ANKRD36B	Q8N2N9	1353 aa		29.07	■■■□□ 2.24
PTP4A2-215	ENST00000533408	TOPAZ1	Q8N9V7	1692 aa		29.07	■■■□□ 2.24
PTP4A2-215	ENST00000533408	KTN1	Q86UP2	1357 aa	Known RBP	29.04	■■■□□ 2.24
PTP4A2-215	ENST00000533408	KRT28	Q7Z3Y7	464 aa		29.04	■■■□□ 2.24
PTP4A2-215	ENST00000533408	CPSF1	Q10570	1443 aa	Known RBP	29.03	■■■□□ 2.24
PTP4A2-215	ENST00000533408	RGPD8	O14715	1765 aa	Predicted RBP	29.03	■■■□□ 2.24
PTP4A2-215	ENST00000533408	PANK3	Q9H999	370 aa		29.02	■■■□□ 2.24
PTP4A2-215	ENST00000533408	ROBO1	Q9Y6N7	1651 aa		29.02	■■■□□ 2.24
PTP4A2-215	ENST00000533408	FBXO41	Q8TF61	875 aa		29.01	■■■□□ 2.23
PTP4A2-215	ENST00000533408		A0A1W2PP64	1363 aa		28.99	■■■□□ 2.23
PTP4A2-215	ENST00000533408	SOS2	Q07890	1332 aa	Predicted RBP	28.98	■■■□□ 2.23
PTP4A2-215	ENST00000533408	USP6	P35125	1406 aa		28.98	■■■□□ 2.23
PTP4A2-215	ENST00000533408	LRRC59	Q96AG4	307 aa	Known RBP	28.98	■■■□□ 2.23
PTP4A2-215	ENST00000533408	KNSTRN	Q9Y448	316 aa		28.98	■■■□□ 2.23
PTP4A2-215	ENST00000533408	TTC21A	Q8NDW8	1320 aa		28.97	■■■□□ 2.23
PTP4A2-215	ENST00000533408	SBNO1	A3KN83	1393 aa		28.97	■■■□□ 2.23
PTP4A2-215	ENST00000533408	EDC4	Q6P2E9	1401 aa	Known RBP	28.96	■■■□□ 2.23
PTP4A2-215	ENST00000533408	PAK3	O75914	559 aa	Predicted RBP	28.96	■■■□□ 2.23
PTP4A2-215	ENST00000533408	CD163L1	Q9NR16	1453 aa		28.95	■■■□□ 2.22
PTP4A2-215	ENST00000533408	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.94	■■■□□ 2.22
PTP4A2-215	ENST00000533408	DDX10	Q13206	875 aa	Known RBP	28.94	■■■□□ 2.22
PTP4A2-215	ENST00000533408	MYOM1	P52179	1685 aa		28.93	■■■□□ 2.22
PTP4A2-215	ENST00000533408	CGNL1	Q0VF96	1302 aa		28.93	■■■□□ 2.22
PTP4A2-215	ENST00000533408	TTC21B	Q7Z4L5	1316 aa		28.93	■■■□□ 2.22
PTP4A2-215	ENST00000533408	NHSL1	Q5SYE7	1610 aa		28.91	■■■□□ 2.22
PTP4A2-215	ENST00000533408	XPC	Q01831	940 aa	Predicted RBP	28.91	■■■□□ 2.22

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms