RNA–Protein interactions for RNA: ENST00000533398.5

VAV3-215, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-215ENST00000533398 ROBO2Q9HCK4 1378 aa13.6□□□□□ -0.23
VAV3-215ENST00000533398 SETD5Q9C0A6 1442 aa13.59□□□□□ -0.23
VAV3-215ENST00000533398 VGFO15240 615 aaPredicted RBP13.58□□□□□ -0.24
VAV3-215ENST00000533398 C1orf167Q5SNV9 1468 aa13.58□□□□□ -0.24
VAV3-215ENST00000533398 PTCH1Q13635 1447 aa13.57□□□□□ -0.24
VAV3-215ENST00000533398 ZNF772Q68DY9 489 aaPredicted RBP13.57□□□□□ -0.24
VAV3-215ENST00000533398 ORAI2Q96SN7 254 aa13.57□□□□□ -0.24
VAV3-215ENST00000533398 AFF2P51816 1311 aa13.57□□□□□ -0.24
VAV3-215ENST00000533398 PNPLA6Q8IY17 1366 aa13.56□□□□□ -0.24
VAV3-215ENST00000533398 RGL3Q3MIN7 710 aa13.55□□□□□ -0.24
VAV3-215ENST00000533398 LRRC59Q96AG4 307 aaKnown RBP13.55□□□□□ -0.24
VAV3-215ENST00000533398 RPGRIP1LQ68CZ1 1315 aa13.55□□□□□ -0.24
VAV3-215ENST00000533398 ADGRF5Q8IZF2 1346 aa13.55□□□□□ -0.24
VAV3-215ENST00000533398 IFT172Q9UG01 1749 aa13.55□□□□□ -0.24
VAV3-215ENST00000533398 C8orf37Q96NL8 207 aa13.54□□□□□ -0.24
VAV3-215ENST00000533398 LAMC1P11047 1609 aa13.53□□□□□ -0.24
VAV3-215ENST00000533398 ADAMTS2O95450 1211 aa13.53□□□□□ -0.24
VAV3-215ENST00000533398 RXRBP28702 533 aa13.53□□□□□ -0.24
VAV3-215ENST00000533398 STK26Q9P289 416 aa13.53□□□□□ -0.24
VAV3-215ENST00000533398 CCDC144AA2RUR9 1427 aa13.53□□□□□ -0.24
VAV3-215ENST00000533398 MPHOSPH9Q99550 1183 aa13.52□□□□□ -0.25
VAV3-215ENST00000533398 SPATA31E1Q6ZUB1 1445 aa13.51□□□□□ -0.25
VAV3-215ENST00000533398 PRAG1Q86YV5 1406 aa13.51□□□□□ -0.25
VAV3-215ENST00000533398 UPF1Q92900 1129 aaKnown RBP eCLIP13.51□□□□□ -0.25
VAV3-215ENST00000533398 NUTM2FA1L443 756 aa13.5□□□□□ -0.25
VAV3-215ENST00000533398 TMEM132EQ6IEE7 984 aa13.5□□□□□ -0.25
VAV3-215ENST00000533398 WAPLQ7Z5K2 1190 aa13.5□□□□□ -0.25
VAV3-215ENST00000533398 CDC42BPGQ6DT37 1551 aa13.49□□□□□ -0.25
VAV3-215ENST00000533398 SOS2Q07890 1332 aaPredicted RBP13.49□□□□□ -0.25
VAV3-215ENST00000533398 XPCQ01831 940 aaPredicted RBP13.49□□□□□ -0.25
VAV3-215ENST00000533398 RGS12O14924 1447 aa13.48□□□□□ -0.25
VAV3-215ENST00000533398 PLEKHH1Q9ULM0 1364 aa13.48□□□□□ -0.25
VAV3-215ENST00000533398 ESCO1Q5FWF5 840 aa13.48□□□□□ -0.25
VAV3-215ENST00000533398 NGLY1Q96IV0 654 aa13.48□□□□□ -0.25
VAV3-215ENST00000533398 QTRT2Q9H974 415 aaKnown RBP13.48□□□□□ -0.25
VAV3-215ENST00000533398 KNDC1Q76NI1 1749 aa13.47□□□□□ -0.25
VAV3-215ENST00000533398 RBM42Q9BTD8 480 aaKnown RBP13.47□□□□□ -0.25
VAV3-215ENST00000533398 CDK12Q9NYV4 1490 aaPredicted RBP13.47□□□□□ -0.25
VAV3-215ENST00000533398 COL22A1Q8NFW1 1626 aaPredicted RBP13.46□□□□□ -0.25
VAV3-215ENST00000533398 PXDNQ92626 1479 aa13.46□□□□□ -0.25
VAV3-215ENST00000533398 PIK3C2GO75747 1445 aa13.46□□□□□ -0.26
VAV3-215ENST00000533398 LRPPRCP42704 1394 aaKnown RBP13.45□□□□□ -0.26
VAV3-215ENST00000533398 RGPD8O14715 1765 aaPredicted RBP13.45□□□□□ -0.26
VAV3-215ENST00000533398 FMN2Q9NZ56 1722 aa13.45□□□□□ -0.26
VAV3-215ENST00000533398 FOXO3O43524 673 aa13.45□□□□□ -0.26
VAV3-215ENST00000533398 RBM6P78332 1123 aaKnown RBP13.45□□□□□ -0.26
VAV3-215ENST00000533398 TECPR2O15040 1411 aa13.45□□□□□ -0.26
VAV3-215ENST00000533398 ANKRD30BQ9BXX2 1392 aa13.45□□□□□ -0.26
VAV3-215ENST00000533398 MYCNP04198 464 aaPredicted RBP13.44□□□□□ -0.26
VAV3-215ENST00000533398 POLA2Q14181 598 aa13.44□□□□□ -0.26
VAV3-215ENST00000533398 MARF1Q9Y4F3 1742 aaKnown RBP13.44□□□□□ -0.26
VAV3-215ENST00000533398 YTHDC2Q9H6S0 1430 aaKnown RBP13.43□□□□□ -0.26
VAV3-215ENST00000533398 USP21Q9UK80 565 aa13.43□□□□□ -0.26
VAV3-215ENST00000533398 MYOM2P54296 1465 aa13.42□□□□□ -0.26
VAV3-215ENST00000533398 NPHP3Q7Z494 1330 aa13.42□□□□□ -0.26
VAV3-215ENST00000533398 ABCC11Q96J66 1382 aa13.42□□□□□ -0.26
VAV3-215ENST00000533398 CFAP70Q5T0N1 1121 aa13.41□□□□□ -0.26
VAV3-215ENST00000533398 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
VAV3-215ENST00000533398 SAFB2Q14151 953 aaKnown RBP eCLIP13.4□□□□□ -0.26
VAV3-215ENST00000533398 FNBP4Q8N3X1 1017 aaPredicted RBP13.39□□□□□ -0.27
VAV3-215ENST00000533398 C14orf93Q9H972 538 aaKnown RBP13.39□□□□□ -0.27
VAV3-215ENST00000533398 RAB3GAP2Q9H2M9 1393 aa13.39□□□□□ -0.27
VAV3-215ENST00000533398 NRXN1Q9ULB1 1477 aa13.39□□□□□ -0.27
VAV3-215ENST00000533398 KIF1AQ12756 1690 aa13.39□□□□□ -0.27
VAV3-215ENST00000533398 ATRNO75882 1429 aa13.39□□□□□ -0.27
VAV3-215ENST00000533398 EP400Q96L91 3159 aa13.38□□□□□ -0.27
VAV3-215ENST00000533398 TRPC5Q9UL62 973 aaPredicted RBP13.38□□□□□ -0.27
VAV3-215ENST00000533398 BCL9LQ86UU0 1499 aa13.37□□□□□ -0.27
VAV3-215ENST00000533398 PRAM1Q96QH2 718 aa13.37□□□□□ -0.27
VAV3-215ENST00000533398 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
VAV3-215ENST00000533398 SPATA31A3Q5VYP0 1347 aa13.36□□□□□ -0.27
VAV3-215ENST00000533398 USP32Q8NFA0 1604 aa13.35□□□□□ -0.27
VAV3-215ENST00000533398 DHX57Q6P158 1386 aaKnown RBP13.35□□□□□ -0.27
VAV3-215ENST00000533398 CABLES1Q8TDN4 633 aa13.35□□□□□ -0.27
VAV3-215ENST00000533398 ATAD2Q6PL18 1390 aa13.34□□□□□ -0.27
VAV3-215ENST00000533398 ABCA3Q99758 1704 aa13.34□□□□□ -0.27
VAV3-215ENST00000533398 PHF8Q9UPP1 1060 aa13.34□□□□□ -0.27
VAV3-215ENST00000533398 KDM2AQ9Y2K7 1162 aa13.34□□□□□ -0.27
VAV3-215ENST00000533398 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.33□□□□□ -0.27
VAV3-215ENST00000533398 HIRIP3Q9BW71 556 aaPredicted RBP13.33□□□□□ -0.28
VAV3-215ENST00000533398 ADGRB1O14514 1584 aa13.32□□□□□ -0.28
VAV3-215ENST00000533398 GLI3P10071 1580 aa13.32□□□□□ -0.28
VAV3-215ENST00000533398 PLCH1Q4KWH8 1693 aa13.32□□□□□ -0.28
VAV3-215ENST00000533398 LMOD2Q6P5Q4 547 aa13.32□□□□□ -0.28
VAV3-215ENST00000533398 CHRDL2Q6WN34 429 aa13.32□□□□□ -0.28
VAV3-215ENST00000533398 PMFBP1Q8TBY8 1022 aa13.32□□□□□ -0.28
VAV3-215ENST00000533398 SIRT1Q96EB6 747 aa13.32□□□□□ -0.28
VAV3-215ENST00000533398 POGKQ9P215 609 aa13.32□□□□□ -0.28
VAV3-215ENST00000533398 TRAK1Q9UPV9 953 aa13.32□□□□□ -0.28
VAV3-215ENST00000533398 BRWD3Q6RI45 1802 aa13.32□□□□□ -0.28
VAV3-215ENST00000533398 TNS3Q68CZ2 1445 aa13.31□□□□□ -0.28
VAV3-215ENST00000533398 SLIT2O94813 1529 aa13.31□□□□□ -0.28
VAV3-215ENST00000533398 GJD4Q96KN9 370 aaPredicted RBP13.31□□□□□ -0.28
VAV3-215ENST00000533398 SRCAPQ6ZRS2 3230 aa13.3□□□□□ -0.28
VAV3-215ENST00000533398 RALGAPBQ86X10 1494 aa13.3□□□□□ -0.28
VAV3-215ENST00000533398 DLC1Q96QB1 1528 aa13.3□□□□□ -0.28
VAV3-215ENST00000533398 HAP1P54257 671 aaPredicted RBP13.3□□□□□ -0.28
VAV3-215ENST00000533398 DCAF11Q8TEB1 546 aa13.3□□□□□ -0.28
VAV3-215ENST00000533398 MINK1Q8N4C8 1332 aaPredicted RBP13.3□□□□□ -0.28
VAV3-215ENST00000533398 ADGRB2O60241 1585 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms