RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-223ENST00000533299 TPRNQ4KMQ1 711 aa7.62□□□□□ -1.19
LMO7-223ENST00000533299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.62□□□□□ -1.19
LMO7-223ENST00000533299 SCUBE3Q8IX30 993 aa7.62□□□□□ -1.19
LMO7-223ENST00000533299 CDHR5Q9HBB8 845 aa7.62□□□□□ -1.19
LMO7-223ENST00000533299 VSIG8P0DPA2 414 aa7.61□□□□□ -1.19
LMO7-223ENST00000533299 DNAJB2P25686 324 aa7.61□□□□□ -1.19
LMO7-223ENST00000533299 FCF1Q9Y324 198 aaKnown RBP7.61□□□□□ -1.19
LMO7-223ENST00000533299 VEGFBP49765 207 aa7.6□□□□□ -1.19
LMO7-223ENST00000533299 HPS1Q92902 700 aa7.6□□□□□ -1.19
LMO7-223ENST00000533299 PSMG3-AS1Q96PY0 264 aa7.6□□□□□ -1.19
LMO7-223ENST00000533299 J3QL48 77 aa7.59□□□□□ -1.19
LMO7-223ENST00000533299 KRTAP9-6A0A140TA67 174 aa7.59□□□□□ -1.19
LMO7-223ENST00000533299 ZBTB24O43167 697 aaPredicted RBP7.59□□□□□ -1.19
LMO7-223ENST00000533299 FOXK2Q01167 660 aa7.58□□□□□ -1.2
LMO7-223ENST00000533299 DNMT3AQ9Y6K1 912 aaPredicted RBP7.58□□□□□ -1.2
LMO7-223ENST00000533299 GRXCR2A6NFK2 248 aa7.57□□□□□ -1.2
LMO7-223ENST00000533299 REPIN1Q9BWE0 567 aaKnown RBP7.57□□□□□ -1.2
LMO7-223ENST00000533299 TMEM134Q9H6X4 195 aa7.57□□□□□ -1.2
LMO7-223ENST00000533299 MLLT3P42568 568 aaPredicted RBP7.56□□□□□ -1.2
LMO7-223ENST00000533299 OSBPP22059 807 aa7.55□□□□□ -1.2
LMO7-223ENST00000533299 GPAT2Q6NUI2 795 aa7.55□□□□□ -1.2
LMO7-223ENST00000533299 MRGPRX2Q96LB1 330 aa7.55□□□□□ -1.2
LMO7-223ENST00000533299 NPDC1Q9NQX5 325 aaPredicted RBP7.55□□□□□ -1.2
LMO7-223ENST00000533299 KRTAP1-3Q8IUG1 177 aa7.53□□□□□ -1.2
LMO7-223ENST00000533299 GPIHBP1Q8IV16 184 aa7.52□□□□□ -1.2
LMO7-223ENST00000533299 PRKCSHP14314 528 aaPredicted RBP7.52□□□□□ -1.21
LMO7-223ENST00000533299 TRIM46Q7Z4K8 759 aa7.52□□□□□ -1.21
LMO7-223ENST00000533299 RBM26Q5T8P6 1007 aaKnown RBP7.51□□□□□ -1.21
LMO7-223ENST00000533299 RBM46Q8TBY0 533 aaKnown RBP7.5□□□□□ -1.21
LMO7-223ENST00000533299 SLC10A3P09131 477 aa7.5□□□□□ -1.21
LMO7-223ENST00000533299 ADAMTS8Q9UP79 889 aa7.5□□□□□ -1.21
LMO7-223ENST00000533299 NUTM2FA1L443 756 aa7.49□□□□□ -1.21
LMO7-223ENST00000533299 TRIM32Q13049 653 aa7.49□□□□□ -1.21
LMO7-223ENST00000533299 ZC3H15Q8WU90 426 aaKnown RBP7.49□□□□□ -1.21
LMO7-223ENST00000533299 ADAM23O75077 832 aa7.48□□□□□ -1.21
LMO7-223ENST00000533299 THAP11Q96EK4 314 aa7.48□□□□□ -1.21
LMO7-223ENST00000533299 FAM160A2Q8N612 972 aaPredicted RBP7.48□□□□□ -1.21
LMO7-223ENST00000533299 FMNL1O95466 1100 aaPredicted RBP7.46□□□□□ -1.21
LMO7-223ENST00000533299 KANK3Q6NY19 840 aa7.46□□□□□ -1.21
LMO7-223ENST00000533299 FCHSD2O94868 740 aa7.45□□□□□ -1.22
LMO7-223ENST00000533299 PUS10Q3MIT2 529 aaKnown RBP7.45□□□□□ -1.22
LMO7-223ENST00000533299 RSPH4AQ5TD94 716 aa7.45□□□□□ -1.22
LMO7-223ENST00000533299 SALL2Q9Y467 1007 aaPredicted RBP7.45□□□□□ -1.22
LMO7-223ENST00000533299 BMP1P13497 986 aa7.45□□□□□ -1.22
LMO7-223ENST00000533299 RCCD1A6NED2 376 aa7.44□□□□□ -1.22
LMO7-223ENST00000533299 CAPN5O15484 640 aaPredicted RBP7.44□□□□□ -1.22
LMO7-223ENST00000533299 ZMYND10O75800 440 aa7.44□□□□□ -1.22
LMO7-223ENST00000533299 KRI1Q8N9T8 703 aaKnown RBP7.44□□□□□ -1.22
LMO7-223ENST00000533299 MSS51Q4VC12 460 aa7.43□□□□□ -1.22
LMO7-223ENST00000533299 HIC1Q14526 733 aa7.43□□□□□ -1.22
LMO7-223ENST00000533299 BARGINQ6ZT62 677 aa7.43□□□□□ -1.22
LMO7-223ENST00000533299 MORN1Q5T089 497 aa7.42□□□□□ -1.22
LMO7-223ENST00000533299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.41□□□□□ -1.22
LMO7-223ENST00000533299 RC3H1Q5TC82 1133 aaKnown RBP7.41□□□□□ -1.22
LMO7-223ENST00000533299 ADGRG1Q9Y653 693 aa7.41□□□□□ -1.22
LMO7-223ENST00000533299 GNPATO15228 680 aa7.41□□□□□ -1.22
LMO7-223ENST00000533299 WNT7BP56706 349 aa7.41□□□□□ -1.22
LMO7-223ENST00000533299 ZFP42Q96MM3 310 aa7.41□□□□□ -1.22
LMO7-223ENST00000533299 IRS1P35568 1242 aa7.4□□□□□ -1.23
LMO7-223ENST00000533299 ALDH1A1P00352 501 aa7.39□□□□□ -1.23
LMO7-223ENST00000533299 PTGDRQ13258 359 aa7.39□□□□□ -1.23
LMO7-223ENST00000533299 PRDM9Q9NQV7 894 aa7.38□□□□□ -1.23
LMO7-223ENST00000533299 MINK1Q8N4C8 1332 aaPredicted RBP7.38□□□□□ -1.23
LMO7-223ENST00000533299 BRICD5Q6PL45 260 aa7.38□□□□□ -1.23
LMO7-223ENST00000533299 AK7Q96M32 723 aa7.38□□□□□ -1.23
LMO7-223ENST00000533299 SLC24A3Q9HC58 644 aa7.38□□□□□ -1.23
LMO7-223ENST00000533299 LCE3BQ5TA77 95 aa7.37□□□□□ -1.23
LMO7-223ENST00000533299 MSTNO14793 375 aa7.36□□□□□ -1.23
LMO7-223ENST00000533299 GPR37O15354 613 aa7.36□□□□□ -1.23
LMO7-223ENST00000533299 MAP2K5Q13163 448 aa7.36□□□□□ -1.23
LMO7-223ENST00000533299 ATP6V1AP38606 617 aa7.35□□□□□ -1.23
LMO7-223ENST00000533299 Q8N3U1 123 aa7.35□□□□□ -1.23
LMO7-223ENST00000533299 MMP16P51512 607 aa7.34□□□□□ -1.23
LMO7-223ENST00000533299 SCARF1Q14162 830 aa7.34□□□□□ -1.23
LMO7-223ENST00000533299 SCARF2Q96GP6 870 aaPredicted RBP7.34□□□□□ -1.24
LMO7-223ENST00000533299 SLC27A5Q9Y2P5 690 aa7.34□□□□□ -1.24
LMO7-223ENST00000533299 WASF2Q9Y6W5 498 aa7.34□□□□□ -1.24
LMO7-223ENST00000533299 IRF6O14896 467 aa7.33□□□□□ -1.24
LMO7-223ENST00000533299 PPFIA3O75145 1194 aa7.33□□□□□ -1.24
LMO7-223ENST00000533299 FECHP22830 423 aa7.33□□□□□ -1.24
LMO7-223ENST00000533299 SKOR1P84550 965 aa7.33□□□□□ -1.24
LMO7-223ENST00000533299 ZNF385CQ66K41 422 aaPredicted RBP7.33□□□□□ -1.24
LMO7-223ENST00000533299 SIAH2O43255 324 aa7.31□□□□□ -1.24
LMO7-223ENST00000533299 MARSP56192 900 aaKnown RBP7.31□□□□□ -1.24
LMO7-223ENST00000533299 OATP04181 439 aa7.31□□□□□ -1.24
LMO7-223ENST00000533299 MRPL14Q6P1L8 145 aaKnown RBP7.31□□□□□ -1.24
LMO7-223ENST00000533299 BTBD11A6QL63 1104 aa7.3□□□□□ -1.24
LMO7-223ENST00000533299 ARHGEF15O94989 841 aa7.3□□□□□ -1.24
LMO7-223ENST00000533299 KRT76Q01546 638 aa7.3□□□□□ -1.24
LMO7-223ENST00000533299 CCDC102AQ96A19 550 aa7.3□□□□□ -1.24
LMO7-223ENST00000533299 CNTNAP3BQ96NU0 1288 aa7.29□□□□□ -1.24
LMO7-223ENST00000533299 KRTAP4-12Q9BQ66 201 aa7.29□□□□□ -1.24
LMO7-223ENST00000533299 CNTNAP3Q9BZ76 1288 aa7.29□□□□□ -1.24
LMO7-223ENST00000533299 DAXXQ9UER7 740 aaPredicted RBP7.29□□□□□ -1.24
LMO7-223ENST00000533299 TRIM66O15016 1216 aa7.29□□□□□ -1.24
LMO7-223ENST00000533299 FUT2Q10981 343 aa7.29□□□□□ -1.24
LMO7-223ENST00000533299 NEUROD2Q15784 382 aa7.29□□□□□ -1.24
LMO7-223ENST00000533299 SVOPQ8N4V2 548 aa7.29□□□□□ -1.24
LMO7-223ENST00000533299 SPOCK3Q9BQ16 436 aa7.28□□□□□ -1.24
LMO7-223ENST00000533299 K7ELQ4 463 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms