RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 SBNO2Q9Y2G9 1366 aa15.85■□□□□ 0.13
GMDS-210ENST00000533279 NCOA3Q9Y6Q9 1424 aa15.85■□□□□ 0.13
GMDS-210ENST00000533279 WAPLQ7Z5K2 1190 aa15.83■□□□□ 0.12
GMDS-210ENST00000533279 MINK1Q8N4C8 1332 aaPredicted RBP15.83■□□□□ 0.12
GMDS-210ENST00000533279 MSH6P52701 1360 aa15.82■□□□□ 0.12
GMDS-210ENST00000533279 TMEM94Q12767 1356 aa15.81■□□□□ 0.12
GMDS-210ENST00000533279 ADGRL3Q9HAR2 1447 aa15.8■□□□□ 0.12
GMDS-210ENST00000533279 SRPK2P78362 688 aaKnown RBP15.8■□□□□ 0.12
GMDS-210ENST00000533279 PLEKHH1Q9ULM0 1364 aa15.79■□□□□ 0.12
GMDS-210ENST00000533279 ATF3P18847 181 aa15.79■□□□□ 0.12
GMDS-210ENST00000533279 HIRIP3Q9BW71 556 aaPredicted RBP15.79■□□□□ 0.12
GMDS-210ENST00000533279 ZNF316A6NFI3 1004 aaPredicted RBP15.78■□□□□ 0.12
GMDS-210ENST00000533279 POLR3GLQ9BT43 218 aa15.78■□□□□ 0.12
GMDS-210ENST00000533279 C19orf44Q9H6X5 657 aa15.78■□□□□ 0.12
GMDS-210ENST00000533279 ADGRB2O60241 1585 aa15.78■□□□□ 0.12
GMDS-210ENST00000533279 LRRC7Q96NW7 1537 aa15.77■□□□□ 0.11
GMDS-210ENST00000533279 DCCP43146 1447 aa15.77■□□□□ 0.11
GMDS-210ENST00000533279 ATAD2Q6PL18 1390 aa15.76■□□□□ 0.11
GMDS-210ENST00000533279 CDC42BPGQ6DT37 1551 aa15.76■□□□□ 0.11
GMDS-210ENST00000533279 WASLO00401 505 aaPredicted RBP15.76■□□□□ 0.11
GMDS-210ENST00000533279 CADPS2Q86UW7 1296 aa15.76■□□□□ 0.11
GMDS-210ENST00000533279 TESK2Q96S53 571 aa15.76■□□□□ 0.11
GMDS-210ENST00000533279 STRCP1A6NGW2 1772 aa15.76■□□□□ 0.11
GMDS-210ENST00000533279 PUS7Q96PZ0 661 aaKnown RBP15.74■□□□□ 0.11
GMDS-210ENST00000533279 CDK19Q9BWU1 502 aa15.74■□□□□ 0.11
GMDS-210ENST00000533279 NALCNQ8IZF0 1738 aa15.74■□□□□ 0.11
GMDS-210ENST00000533279 RBM33Q96EV2 1170 aaKnown RBP15.73■□□□□ 0.11
GMDS-210ENST00000533279 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.73■□□□□ 0.11
GMDS-210ENST00000533279 NINLQ9Y2I6 1382 aa15.73■□□□□ 0.11
GMDS-210ENST00000533279 ANKARQ7Z5J8 1434 aa15.72■□□□□ 0.11
GMDS-210ENST00000533279 TULP4Q9NRJ4 1543 aa15.72■□□□□ 0.11
GMDS-210ENST00000533279 DISP3Q9P2K9 1392 aa15.72■□□□□ 0.11
GMDS-210ENST00000533279 LTBP4Q8N2S1 1624 aa15.72■□□□□ 0.11
GMDS-210ENST00000533279 IQSEC2Q5JU85 1478 aa15.71■□□□□ 0.1
GMDS-210ENST00000533279 TMC1Q8TDI8 760 aa15.7■□□□□ 0.1
GMDS-210ENST00000533279 CABP2Q9NPB3 220 aa15.7■□□□□ 0.1
GMDS-210ENST00000533279 CCDC7Q96M83 1385 aa15.7■□□□□ 0.1
GMDS-210ENST00000533279 KIF7Q2M1P5 1343 aa15.68■□□□□ 0.1
GMDS-210ENST00000533279 ITSN1Q15811 1721 aa15.68■□□□□ 0.1
GMDS-210ENST00000533279 FMN2Q9NZ56 1722 aa15.68■□□□□ 0.1
GMDS-210ENST00000533279 NUDT16Q96DE0 195 aaKnown RBP15.68■□□□□ 0.1
GMDS-210ENST00000533279 CCDC61Q9Y6R9 512 aa15.68■□□□□ 0.1
GMDS-210ENST00000533279 NUTM2FA1L443 756 aa15.67■□□□□ 0.1
GMDS-210ENST00000533279 TOM1O60784 492 aa15.67■□□□□ 0.1
GMDS-210ENST00000533279 HDGFL2Q7Z4V5 671 aaPredicted RBP15.67■□□□□ 0.1
GMDS-210ENST00000533279 TERF2IPQ9NYB0 399 aa15.67■□□□□ 0.1
GMDS-210ENST00000533279 ESCO1Q5FWF5 840 aa15.65■□□□□ 0.1
GMDS-210ENST00000533279 CERKQ8TCT0 537 aa15.65■□□□□ 0.1
GMDS-210ENST00000533279 PPIP5K1Q6PFW1 1433 aa15.65■□□□□ 0.1
GMDS-210ENST00000533279 WASHC2AQ641Q2 1341 aa15.65■□□□□ 0.1
GMDS-210ENST00000533279 ATP7BP35670 1465 aa15.65■□□□□ 0.1
GMDS-210ENST00000533279 XIRP1Q702N8 1843 aaKnown RBP15.64■□□□□ 0.09
GMDS-210ENST00000533279 NGDNQ8NEJ9 315 aaKnown RBP15.64■□□□□ 0.09
GMDS-210ENST00000533279 MSH5O43196 834 aa15.63■□□□□ 0.09
GMDS-210ENST00000533279 C1orf167Q5SNV9 1468 aa15.63■□□□□ 0.09
GMDS-210ENST00000533279 MST1RQ04912 1400 aa15.62■□□□□ 0.09
GMDS-210ENST00000533279 UBAP1LF5GYI3 381 aa15.62■□□□□ 0.09
GMDS-210ENST00000533279 SLAIN2Q9P270 581 aa15.62■□□□□ 0.09
GMDS-210ENST00000533279 PHF8Q9UPP1 1060 aa15.62■□□□□ 0.09
GMDS-210ENST00000533279 KIF1AQ12756 1690 aa15.62■□□□□ 0.09
GMDS-210ENST00000533279 ZNF692Q9BU19 519 aaPredicted RBP15.61■□□□□ 0.09
GMDS-210ENST00000533279 CABP1Q9NZU7 370 aa15.61■□□□□ 0.09
GMDS-210ENST00000533279 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
GMDS-210ENST00000533279 C11orf95C9JLR9 678 aaPredicted RBP15.6■□□□□ 0.09
GMDS-210ENST00000533279 PRR36Q9H6K5 1346 aa15.6■□□□□ 0.09
GMDS-210ENST00000533279 TOPAZ1Q8N9V7 1692 aa15.6■□□□□ 0.09
GMDS-210ENST00000533279 ANKRD36BQ8N2N9 1353 aa15.6■□□□□ 0.09
GMDS-210ENST00000533279 PLEKHG3A1L390 1219 aa15.59■□□□□ 0.09
GMDS-210ENST00000533279 NPHP3Q7Z494 1330 aa15.59■□□□□ 0.09
GMDS-210ENST00000533279 PMFBP1Q8TBY8 1022 aa15.58■□□□□ 0.08
GMDS-210ENST00000533279 SLC12A5Q9H2X9 1139 aa15.58■□□□□ 0.08
GMDS-210ENST00000533279 KNSTRNQ9Y448 316 aa15.58■□□□□ 0.08
GMDS-210ENST00000533279 USP32Q8NFA0 1604 aa15.57■□□□□ 0.08
GMDS-210ENST00000533279 PSME1Q06323 249 aa15.57■□□□□ 0.08
GMDS-210ENST00000533279 DDX10Q13206 875 aaKnown RBP15.57■□□□□ 0.08
GMDS-210ENST00000533279 ACEP12821 1306 aa15.57■□□□□ 0.08
GMDS-210ENST00000533279 BRD4O60885 1362 aaPredicted RBP15.57■□□□□ 0.08
GMDS-210ENST00000533279 KTN1Q86UP2 1357 aaKnown RBP15.57■□□□□ 0.08
GMDS-210ENST00000533279 PANK3Q9H999 370 aa15.56■□□□□ 0.08
GMDS-210ENST00000533279 MYOM1P52179 1685 aa15.56■□□□□ 0.08
GMDS-210ENST00000533279 PIP4K2BP78356 416 aa15.55■□□□□ 0.08
GMDS-210ENST00000533279 ORAI2Q96SN7 254 aa15.55■□□□□ 0.08
GMDS-210ENST00000533279 EDC4Q6P2E9 1401 aaKnown RBP15.54■□□□□ 0.08
GMDS-210ENST00000533279 A0A1W2PP64 1363 aa15.54■□□□□ 0.08
GMDS-210ENST00000533279 POLR3AO14802 1390 aaPredicted RBP15.54■□□□□ 0.08
GMDS-210ENST00000533279 CGNL1Q0VF96 1302 aa15.54■□□□□ 0.08
GMDS-210ENST00000533279 BRINP3Q76B58 766 aa15.54■□□□□ 0.08
GMDS-210ENST00000533279 RGPD8O14715 1765 aaPredicted RBP15.54■□□□□ 0.08
GMDS-210ENST00000533279 PAK3O75914 559 aaPredicted RBP15.53■□□□□ 0.08
GMDS-210ENST00000533279 NSD3Q9BZ95 1437 aa15.52■□□□□ 0.08
GMDS-210ENST00000533279 FOXO3O43524 673 aa15.52■□□□□ 0.08
GMDS-210ENST00000533279 USP6P35125 1406 aa15.51■□□□□ 0.07
GMDS-210ENST00000533279 CPSF1Q10570 1443 aaKnown RBP15.51■□□□□ 0.07
GMDS-210ENST00000533279 TTC21AQ8NDW8 1320 aa15.51■□□□□ 0.07
GMDS-210ENST00000533279 ROBO1Q9Y6N7 1651 aa15.51■□□□□ 0.07
GMDS-210ENST00000533279 AKAP12Q02952 1782 aa15.5■□□□□ 0.07
GMDS-210ENST00000533279 KRT28Q7Z3Y7 464 aa15.5■□□□□ 0.07
GMDS-210ENST00000533279 NSD2O96028 1365 aa15.49■□□□□ 0.07
GMDS-210ENST00000533279 MON2Q7Z3U7 1717 aa15.49■□□□□ 0.07
GMDS-210ENST00000533279 LMOD2Q6P5Q4 547 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms