RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 GOLGA2Q08379 1002 aa19.16■□□□□ 0.66
CAPN1-224ENST00000533129 PPLO60437 1756 aa19.16■□□□□ 0.66
CAPN1-224ENST00000533129 CHGAP10645 457 aaKnown RBP19.15■□□□□ 0.66
CAPN1-224ENST00000533129 WDR43Q15061 677 aaKnown RBP eCLIP19.15■□□□□ 0.66
CAPN1-224ENST00000533129 SLC52A1Q9NWF4 448 aa19.15■□□□□ 0.66
CAPN1-224ENST00000533129 SCAF11Q99590 1463 aaKnown RBP19.15■□□□□ 0.66
CAPN1-224ENST00000533129 FRAT2O75474 233 aaPredicted RBP19.15■□□□□ 0.66
CAPN1-224ENST00000533129 PPP2R1AP30153 589 aa19.14■□□□□ 0.65
CAPN1-224ENST00000533129 ADGRF5Q8IZF2 1346 aa19.14■□□□□ 0.65
CAPN1-224ENST00000533129 CLTCQ00610 1675 aaKnown RBP19.13■□□□□ 0.65
CAPN1-224ENST00000533129 ERVK-7P63135 1459 aa19.13■□□□□ 0.65
CAPN1-224ENST00000533129 PIK3C2GO75747 1445 aa19.12■□□□□ 0.65
CAPN1-224ENST00000533129 SLFN5Q08AF3 891 aa19.12■□□□□ 0.65
CAPN1-224ENST00000533129 FAM43AQ8N2R8 423 aa19.11■□□□□ 0.65
CAPN1-224ENST00000533129 TRMT2AQ8IZ69 625 aaKnown RBP19.11■□□□□ 0.65
CAPN1-224ENST00000533129 RGS3P49796 1198 aa19.1■□□□□ 0.65
CAPN1-224ENST00000533129 SETBP1Q9Y6X0 1596 aa19.1■□□□□ 0.65
CAPN1-224ENST00000533129 NKTRP30414 1462 aaKnown RBP19.1■□□□□ 0.65
CAPN1-224ENST00000533129 IDI1Q13907 227 aa19.1■□□□□ 0.65
CAPN1-224ENST00000533129 KNSTRNQ9Y448 316 aa19.1■□□□□ 0.65
CAPN1-224ENST00000533129 NEXMIFQ5QGS0 1516 aa19.09■□□□□ 0.65
CAPN1-224ENST00000533129 ASXL1Q8IXJ9 1541 aa19.08■□□□□ 0.65
CAPN1-224ENST00000533129 SPATA31D1Q6ZQQ2 1576 aa19.08■□□□□ 0.65
CAPN1-224ENST00000533129 AMER1Q5JTC6 1135 aaPredicted RBP19.08■□□□□ 0.64
CAPN1-224ENST00000533129 CFAP70Q5T0N1 1121 aa19.08■□□□□ 0.64
CAPN1-224ENST00000533129 TMEM131LA2VDJ0 1609 aa19.07■□□□□ 0.64
CAPN1-224ENST00000533129 NCBP3Q53F19 620 aaKnown RBP19.07■□□□□ 0.64
CAPN1-224ENST00000533129 UBE2Q2Q8WVN8 375 aa19.07■□□□□ 0.64
CAPN1-224ENST00000533129 MLECQ14165 292 aa19.06■□□□□ 0.64
CAPN1-224ENST00000533129 NPC1L1Q9UHC9 1359 aa19.06■□□□□ 0.64
CAPN1-224ENST00000533129 USP19O94966 1318 aa19.05■□□□□ 0.64
CAPN1-224ENST00000533129 ZFYVE9O95405 1425 aa19.05■□□□□ 0.64
CAPN1-224ENST00000533129 VGFO15240 615 aaPredicted RBP19.05■□□□□ 0.64
CAPN1-224ENST00000533129 FBXO31Q5XUX0 539 aaPredicted RBP19.05■□□□□ 0.64
CAPN1-224ENST00000533129 RSPH6AQ9H0K4 717 aa19.05■□□□□ 0.64
CAPN1-224ENST00000533129 MYOM1P52179 1685 aa19.04■□□□□ 0.64
CAPN1-224ENST00000533129 NINLQ9Y2I6 1382 aa19.04■□□□□ 0.64
CAPN1-224ENST00000533129 TRHP20396 242 aaPredicted RBP19.04■□□□□ 0.64
CAPN1-224ENST00000533129 ESF1Q9H501 851 aaKnown RBP19.04■□□□□ 0.64
CAPN1-224ENST00000533129 CDCA8Q53HL2 280 aa19.03■□□□□ 0.64
CAPN1-224ENST00000533129 C14orf93Q9H972 538 aaKnown RBP19.03■□□□□ 0.64
CAPN1-224ENST00000533129 MAPK8IP3Q9UPT6 1336 aa19.03■□□□□ 0.64
CAPN1-224ENST00000533129 CGNL1Q0VF96 1302 aa19.02■□□□□ 0.63
CAPN1-224ENST00000533129 MYO3AQ8NEV4 1616 aa19.01■□□□□ 0.63
CAPN1-224ENST00000533129 BECN1Q14457 450 aa19.01■□□□□ 0.63
CAPN1-224ENST00000533129 ADGRB1O14514 1584 aa19.01■□□□□ 0.63
CAPN1-224ENST00000533129 E9PSI1 815 aa19■□□□□ 0.63
CAPN1-224ENST00000533129 NGEFQ8N5V2 710 aa19■□□□□ 0.63
CAPN1-224ENST00000533129 MYO5BQ9ULV0 1848 aa19■□□□□ 0.63
CAPN1-224ENST00000533129 NLRP1Q9C000 1473 aa19■□□□□ 0.63
CAPN1-224ENST00000533129 PDE3AQ14432 1141 aa18.99■□□□□ 0.63
CAPN1-224ENST00000533129 ZMYM3Q14202 1370 aa18.99■□□□□ 0.63
CAPN1-224ENST00000533129 IGHDP01880 384 aa18.98■□□□□ 0.63
CAPN1-224ENST00000533129 BCAR3O75815 825 aa18.98■□□□□ 0.63
CAPN1-224ENST00000533129 SPINK5Q9NQ38 1064 aaPredicted RBP18.98■□□□□ 0.63
CAPN1-224ENST00000533129 EIF5BO60841 1220 aaKnown RBP18.97■□□□□ 0.63
CAPN1-224ENST00000533129 SBNO2Q9Y2G9 1366 aa18.97■□□□□ 0.63
CAPN1-224ENST00000533129 KDM5AP29375 1690 aaKnown RBP18.97■□□□□ 0.63
CAPN1-224ENST00000533129 CCDC146Q8IYE0 955 aa18.96■□□□□ 0.63
CAPN1-224ENST00000533129 DNAJC5Q9H3Z4 198 aa18.96■□□□□ 0.63
CAPN1-224ENST00000533129 POGKQ9P215 609 aa18.96■□□□□ 0.63
CAPN1-224ENST00000533129 APAF1O14727 1248 aa18.95■□□□□ 0.62
CAPN1-224ENST00000533129 L1TD1Q5T7N2 865 aaKnown RBP18.95■□□□□ 0.62
CAPN1-224ENST00000533129 STAG3Q9UJ98 1225 aa18.95■□□□□ 0.62
CAPN1-224ENST00000533129 A2ML1A8K2U0 1454 aa18.95■□□□□ 0.62
CAPN1-224ENST00000533129 CLUAP1Q96AJ1 413 aa18.95■□□□□ 0.62
CAPN1-224ENST00000533129 NUTM2DQ5VT03 806 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-224ENST00000533129 SEC24BO95487 1268 aa18.93■□□□□ 0.62
CAPN1-224ENST00000533129 CENPJQ9HC77 1338 aaPredicted RBP18.92■□□□□ 0.62
CAPN1-224ENST00000533129 ANTXR1Q9H6X2 564 aa18.92■□□□□ 0.62
CAPN1-224ENST00000533129 AAMPQ13685 434 aa18.92■□□□□ 0.62
CAPN1-224ENST00000533129 TNRQ92752 1358 aa18.91■□□□□ 0.62
CAPN1-224ENST00000533129 TRAK1Q9UPV9 953 aa18.89■□□□□ 0.62
CAPN1-224ENST00000533129 QRICH2Q9H0J4 1663 aa18.89■□□□□ 0.61
CAPN1-224ENST00000533129 TMEM132EQ6IEE7 984 aa18.89■□□□□ 0.61
CAPN1-224ENST00000533129 RIMS2Q9UQ26 1411 aa18.88■□□□□ 0.61
CAPN1-224ENST00000533129 SLKQ9H2G2 1235 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-224ENST00000533129 UPF2Q9HAU5 1272 aaKnown RBP18.88■□□□□ 0.61
CAPN1-224ENST00000533129 ARHGEF28Q8N1W1 1705 aaKnown RBP18.88■□□□□ 0.61
CAPN1-224ENST00000533129 CANXP27824 592 aaKnown RBP18.87■□□□□ 0.61
CAPN1-224ENST00000533129 PMFBP1Q8TBY8 1022 aa18.87■□□□□ 0.61
CAPN1-224ENST00000533129 TBC1D32Q96NH3 1257 aa18.87■□□□□ 0.61
CAPN1-224ENST00000533129 DMRT2Q9Y5R5 561 aa18.87■□□□□ 0.61
CAPN1-224ENST00000533129 COG6Q9Y2V7 657 aa18.87■□□□□ 0.61
CAPN1-224ENST00000533129 PANK1Q8TE04 598 aa18.86■□□□□ 0.61
CAPN1-224ENST00000533129 ALKQ9UM73 1620 aa18.85■□□□□ 0.61
CAPN1-224ENST00000533129 RRAGDQ9NQL2 400 aaPredicted RBP18.85■□□□□ 0.61
CAPN1-224ENST00000533129 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.84■□□□□ 0.61
CAPN1-224ENST00000533129 POLR3AO14802 1390 aaPredicted RBP18.84■□□□□ 0.61
CAPN1-224ENST00000533129 FER1L4A9Z1Z3 1794 aa18.84■□□□□ 0.61
CAPN1-224ENST00000533129 WWC1Q8IX03 1113 aa18.83■□□□□ 0.61
CAPN1-224ENST00000533129 TBC1D2Q9BYX2 928 aa18.82■□□□□ 0.6
CAPN1-224ENST00000533129 SHPRHQ149N8 1683 aa18.82■□□□□ 0.6
CAPN1-224ENST00000533129 UBR1Q8IWV7 1749 aa18.82■□□□□ 0.6
CAPN1-224ENST00000533129 C3P01024 1663 aa18.81■□□□□ 0.6
CAPN1-224ENST00000533129 YTHDC2Q9H6S0 1430 aaKnown RBP18.81■□□□□ 0.6
CAPN1-224ENST00000533129 HDGFP51858 240 aaKnown RBP18.81■□□□□ 0.6
CAPN1-224ENST00000533129 FSD2A1L4K1 749 aa18.8■□□□□ 0.6
CAPN1-224ENST00000533129 PUS7Q96PZ0 661 aaKnown RBP18.79■□□□□ 0.6
CAPN1-224ENST00000533129 RARSP54136 660 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms