RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 IQGAP3Q86VI3 1631 aa11.79□□□□□ -0.52
BDNF-216ENST00000532997 CASC1Q6TDU7 716 aa11.79□□□□□ -0.52
BDNF-216ENST00000532997 ZMYM3Q14202 1370 aa11.79□□□□□ -0.52
BDNF-216ENST00000532997 MTHFSP49914 203 aa11.79□□□□□ -0.52
BDNF-216ENST00000532997 SRPK2P78362 688 aaKnown RBP11.79□□□□□ -0.52
BDNF-216ENST00000532997 TRMT2AQ8IZ69 625 aaKnown RBP11.79□□□□□ -0.52
BDNF-216ENST00000532997 POGKQ9P215 609 aa11.79□□□□□ -0.52
BDNF-216ENST00000532997 CLASP1Q7Z460 1538 aa11.78□□□□□ -0.52
BDNF-216ENST00000532997 MAGI2Q86UL8 1455 aa11.78□□□□□ -0.52
BDNF-216ENST00000532997 WDR7Q9Y4E6 1490 aa11.78□□□□□ -0.52
BDNF-216ENST00000532997 TBC1D32Q96NH3 1257 aa11.78□□□□□ -0.52
BDNF-216ENST00000532997 TERF2IPQ9NYB0 399 aa11.78□□□□□ -0.52
BDNF-216ENST00000532997 NSD3Q9BZ95 1437 aa11.78□□□□□ -0.52
BDNF-216ENST00000532997 MCM4P33991 863 aa11.78□□□□□ -0.52
BDNF-216ENST00000532997 PLCH2O75038 1416 aa11.78□□□□□ -0.52
BDNF-216ENST00000532997 PLA2R1Q13018 1463 aa11.78□□□□□ -0.52
BDNF-216ENST00000532997 AFAP1Q8N556 730 aa11.78□□□□□ -0.52
BDNF-216ENST00000532997 PLXNC1O60486 1568 aa11.77□□□□□ -0.53
BDNF-216ENST00000532997 KDM5AP29375 1690 aaKnown RBP11.77□□□□□ -0.53
BDNF-216ENST00000532997 TRAK2O60296 914 aa11.77□□□□□ -0.53
BDNF-216ENST00000532997 HDGFL2Q7Z4V5 671 aaPredicted RBP11.77□□□□□ -0.53
BDNF-216ENST00000532997 HAP1P54257 671 aaPredicted RBP11.76□□□□□ -0.53
BDNF-216ENST00000532997 STAG3Q9UJ98 1225 aa11.76□□□□□ -0.53
BDNF-216ENST00000532997 MYO5CQ9NQX4 1742 aa11.76□□□□□ -0.53
BDNF-216ENST00000532997 TBC1D2Q9BYX2 928 aa11.76□□□□□ -0.53
BDNF-216ENST00000532997 VGFO15240 615 aaPredicted RBP11.75□□□□□ -0.53
BDNF-216ENST00000532997 CCDC27Q2M243 656 aa11.75□□□□□ -0.53
BDNF-216ENST00000532997 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
BDNF-216ENST00000532997 RTEL1-TNFRSF6BF6WH68 1400 aa11.74□□□□□ -0.53
BDNF-216ENST00000532997 GGT6Q6P531 493 aa11.74□□□□□ -0.53
BDNF-216ENST00000532997 NSD2O96028 1365 aa11.74□□□□□ -0.53
BDNF-216ENST00000532997 NCLP19338 710 aaKnown RBP11.73□□□□□ -0.53
BDNF-216ENST00000532997 MSNP26038 577 aaKnown RBP11.73□□□□□ -0.53
BDNF-216ENST00000532997 SLC12A5Q9H2X9 1139 aa11.73□□□□□ -0.53
BDNF-216ENST00000532997 SPINK5Q9NQ38 1064 aaPredicted RBP11.73□□□□□ -0.53
BDNF-216ENST00000532997 RPGRIP1LQ68CZ1 1315 aa11.73□□□□□ -0.53
BDNF-216ENST00000532997 TTC37Q6PGP7 1564 aa11.73□□□□□ -0.53
BDNF-216ENST00000532997 ATF7IPQ6VMQ6 1270 aa11.72□□□□□ -0.53
BDNF-216ENST00000532997 ABCC11Q96J66 1382 aa11.72□□□□□ -0.53
BDNF-216ENST00000532997 NCBP3Q53F19 620 aaKnown RBP11.72□□□□□ -0.53
BDNF-216ENST00000532997 EXOSC9Q06265 439 aaKnown RBP11.72□□□□□ -0.53
BDNF-216ENST00000532997 TRPM2O94759 1503 aa11.71□□□□□ -0.53
BDNF-216ENST00000532997 CDC42BPBQ9Y5S2 1711 aa11.71□□□□□ -0.53
BDNF-216ENST00000532997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.71□□□□□ -0.53
BDNF-216ENST00000532997 PCDHB15Q9Y5E8 787 aa11.71□□□□□ -0.53
BDNF-216ENST00000532997 ADGRF5Q8IZF2 1346 aa11.71□□□□□ -0.53
BDNF-216ENST00000532997 RIPK4P57078 832 aa11.71□□□□□ -0.54
BDNF-216ENST00000532997 DIAPH1O60610 1272 aaKnown RBP11.7□□□□□ -0.54
BDNF-216ENST00000532997 LMOD3Q0VAK6 560 aa11.7□□□□□ -0.54
BDNF-216ENST00000532997 SAFB2Q14151 953 aaKnown RBP eCLIP11.7□□□□□ -0.54
BDNF-216ENST00000532997 HSP90AA2PQ14568 343 aaPredicted RBP11.7□□□□□ -0.54
BDNF-216ENST00000532997 ANKRD45Q5TZF3 282 aa11.7□□□□□ -0.54
BDNF-216ENST00000532997 ZNF428Q96B54 188 aa11.7□□□□□ -0.54
BDNF-216ENST00000532997 TRAPPC8Q9Y2L5 1435 aa11.69□□□□□ -0.54
BDNF-216ENST00000532997 HDAC1Q13547 482 aaPredicted RBP11.69□□□□□ -0.54
BDNF-216ENST00000532997 LNPKQ9C0E8 428 aa11.69□□□□□ -0.54
BDNF-216ENST00000532997 SBNO2Q9Y2G9 1366 aa11.69□□□□□ -0.54
BDNF-216ENST00000532997 SEC24BO95487 1268 aa11.69□□□□□ -0.54
BDNF-216ENST00000532997 GCC1Q96CN9 775 aa11.69□□□□□ -0.54
BDNF-216ENST00000532997 CARD14Q9BXL6 1004 aa11.69□□□□□ -0.54
BDNF-216ENST00000532997 GRPEL1Q9HAV7 217 aa11.69□□□□□ -0.54
BDNF-216ENST00000532997 STK26Q9P289 416 aa11.68□□□□□ -0.54
BDNF-216ENST00000532997 MADDQ8WXG6 1647 aa11.68□□□□□ -0.54
BDNF-216ENST00000532997 PUS7Q96PZ0 661 aaKnown RBP11.68□□□□□ -0.54
BDNF-216ENST00000532997 RNF17Q9BXT8 1623 aaKnown RBP11.68□□□□□ -0.54
BDNF-216ENST00000532997 TSR2Q969E8 191 aaKnown RBP11.67□□□□□ -0.54
BDNF-216ENST00000532997 IL16Q14005 1332 aa11.67□□□□□ -0.54
BDNF-216ENST00000532997 NOB1Q9ULX3 412 aaKnown RBP11.67□□□□□ -0.54
BDNF-216ENST00000532997 DDX49Q9Y6V7 483 aaKnown RBP11.67□□□□□ -0.54
BDNF-216ENST00000532997 API5Q9BZZ5 524 aaKnown RBP11.67□□□□□ -0.54
BDNF-216ENST00000532997 TMPOP42166 694 aaKnown RBP11.67□□□□□ -0.54
BDNF-216ENST00000532997 TMEM132EQ6IEE7 984 aa11.67□□□□□ -0.54
BDNF-216ENST00000532997 SHROOM2Q13796 1616 aa11.66□□□□□ -0.54
BDNF-216ENST00000532997 NUCB2P80303 420 aa11.66□□□□□ -0.54
BDNF-216ENST00000532997 PTPRTO14522 1441 aa11.66□□□□□ -0.54
BDNF-216ENST00000532997 ST18O60284 1047 aa11.66□□□□□ -0.54
BDNF-216ENST00000532997 NOS1P29475 1434 aa11.66□□□□□ -0.54
BDNF-216ENST00000532997 CDC45O75419 566 aa11.66□□□□□ -0.54
BDNF-216ENST00000532997 ALDH1L2Q3SY69 923 aa11.66□□□□□ -0.54
BDNF-216ENST00000532997 UBE2Q2Q8WVN8 375 aa11.66□□□□□ -0.54
BDNF-216ENST00000532997 MYOM2P54296 1465 aa11.65□□□□□ -0.54
BDNF-216ENST00000532997 RLBP1P12271 317 aa11.65□□□□□ -0.54
BDNF-216ENST00000532997 GNAI1P63096 354 aa11.65□□□□□ -0.54
BDNF-216ENST00000532997 CHD1LQ86WJ1 897 aa11.65□□□□□ -0.54
BDNF-216ENST00000532997 C14orf93Q9H972 538 aaKnown RBP11.65□□□□□ -0.54
BDNF-216ENST00000532997 DMRT2Q9Y5R5 561 aa11.65□□□□□ -0.54
BDNF-216ENST00000532997 SSH1Q8WYL5 1049 aa11.65□□□□□ -0.54
BDNF-216ENST00000532997 IQGAP1P46940 1657 aa11.65□□□□□ -0.54
BDNF-216ENST00000532997 ERVK-7P63135 1459 aa11.65□□□□□ -0.54
BDNF-216ENST00000532997 MCCP23508 829 aa11.65□□□□□ -0.55
BDNF-216ENST00000532997 ESPNB1AK53 854 aa11.64□□□□□ -0.55
BDNF-216ENST00000532997 PTMAP06454 111 aaKnown RBP11.64□□□□□ -0.55
BDNF-216ENST00000532997 TRIM27P14373 513 aa11.64□□□□□ -0.55
BDNF-216ENST00000532997 CLCN1P35523 988 aa11.64□□□□□ -0.55
BDNF-216ENST00000532997 GGNBP2Q9H3C7 697 aa11.64□□□□□ -0.55
BDNF-216ENST00000532997 CABP2Q9NPB3 220 aa11.64□□□□□ -0.55
BDNF-216ENST00000532997 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
BDNF-216ENST00000532997 ADGRL1O94910 1474 aa11.64□□□□□ -0.55
BDNF-216ENST00000532997 XRCC6P12956 609 aaKnown RBP eCLIP11.64□□□□□ -0.55
BDNF-216ENST00000532997 ATAD2Q6PL18 1390 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms