RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 RSF1Q96T23 1441 aaPredicted RBP9.71□□□□□ -0.86
CTNND1-231ENST00000532463 WWC2Q6AWC2 1192 aa9.71□□□□□ -0.86
CTNND1-231ENST00000532463 NFXL1Q6ZNB6 911 aa9.71□□□□□ -0.86
CTNND1-231ENST00000532463 ANKRD45Q5TZF3 282 aa9.7□□□□□ -0.86
CTNND1-231ENST00000532463 TMCO3Q6UWJ1 677 aa9.7□□□□□ -0.86
CTNND1-231ENST00000532463 IBSPP21815 317 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-231ENST00000532463 BMS1Q14692 1282 aaKnown RBP9.7□□□□□ -0.86
CTNND1-231ENST00000532463 FAM114A1Q8IWE2 563 aa9.7□□□□□ -0.86
CTNND1-231ENST00000532463 ANKRD18BA2A2Z9 1011 aa9.69□□□□□ -0.86
CTNND1-231ENST00000532463 RNF214Q8ND24 703 aa9.69□□□□□ -0.86
CTNND1-231ENST00000532463 KIF7Q2M1P5 1343 aa9.69□□□□□ -0.86
CTNND1-231ENST00000532463 UQCRHLA0A096LP55 91 aa9.69□□□□□ -0.86
CTNND1-231ENST00000532463 UQCRHP07919 91 aa9.69□□□□□ -0.86
CTNND1-231ENST00000532463 SETSIPP0DME0 302 aa9.69□□□□□ -0.86
CTNND1-231ENST00000532463 SMC1AQ14683 1233 aaKnown RBP9.69□□□□□ -0.86
CTNND1-231ENST00000532463 TSPY26PQ9H489 355 aa9.69□□□□□ -0.86
CTNND1-231ENST00000532463 XBP1P17861 261 aa9.69□□□□□ -0.86
CTNND1-231ENST00000532463 CRACR2AQ9BSW2 395 aa9.69□□□□□ -0.86
CTNND1-231ENST00000532463 HSPA5P11021 654 aaKnown RBP9.69□□□□□ -0.86
CTNND1-231ENST00000532463 PDCL3Q9H2J4 239 aa9.69□□□□□ -0.86
CTNND1-231ENST00000532463 KINO60870 393 aaKnown RBP9.68□□□□□ -0.86
CTNND1-231ENST00000532463 SSR1P43307 286 aaKnown RBP9.68□□□□□ -0.86
CTNND1-231ENST00000532463 PPFIBP1Q86W92 1011 aa9.68□□□□□ -0.86
CTNND1-231ENST00000532463 TNNT1P13805 278 aa9.68□□□□□ -0.86
CTNND1-231ENST00000532463 WDR66Q8TBY9 1149 aa9.68□□□□□ -0.86
CTNND1-231ENST00000532463 KCNH8Q96L42 1107 aa9.68□□□□□ -0.86
CTNND1-231ENST00000532463 CWC22Q9HCG8 908 aaKnown RBP9.67□□□□□ -0.86
CTNND1-231ENST00000532463 LRRFIP2Q9Y608 721 aaKnown RBP9.67□□□□□ -0.86
CTNND1-231ENST00000532463 GOLGA3Q08378 1498 aa9.67□□□□□ -0.86
CTNND1-231ENST00000532463 PLEKHD1A6NEE1 506 aa9.67□□□□□ -0.86
CTNND1-231ENST00000532463 GRIPAP1Q4V328 841 aa9.67□□□□□ -0.86
CTNND1-231ENST00000532463 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.67□□□□□ -0.86
CTNND1-231ENST00000532463 V9GYY5 206 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-231ENST00000532463 ZNF526Q8TF50 670 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-231ENST00000532463 C6orf163Q5TEZ5 329 aa9.66□□□□□ -0.86
CTNND1-231ENST00000532463 DESP17661 470 aa9.66□□□□□ -0.86
CTNND1-231ENST00000532463 BRPF1P55201 1214 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-231ENST00000532463 TMCO5BA8MYB1 307 aa9.66□□□□□ -0.86
CTNND1-231ENST00000532463 POLR3GO15318 223 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-231ENST00000532463 NFKBIBQ15653 356 aa9.66□□□□□ -0.86
CTNND1-231ENST00000532463 HSP90AB4PQ58FF6 505 aa9.66□□□□□ -0.86
CTNND1-231ENST00000532463 UBXN4Q92575 508 aa9.66□□□□□ -0.86
CTNND1-231ENST00000532463 JAKMIP3Q5VZ66 844 aa9.65□□□□□ -0.86
CTNND1-231ENST00000532463 KIAA1328Q86T90 577 aa9.65□□□□□ -0.86
CTNND1-231ENST00000532463 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-231ENST00000532463 FYB1O15117 783 aa9.65□□□□□ -0.86
CTNND1-231ENST00000532463 RNF187Q5TA31 235 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-231ENST00000532463 LUZP1Q86V48 1076 aa9.65□□□□□ -0.86
CTNND1-231ENST00000532463 CGNQ9P2M7 1197 aaKnown RBP9.65□□□□□ -0.86
CTNND1-231ENST00000532463 RB1CC1Q8TDY2 1594 aa9.65□□□□□ -0.86
CTNND1-231ENST00000532463 GTF2A1P52655 376 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-231ENST00000532463 TMEM132AQ24JP5 1023 aa9.65□□□□□ -0.86
CTNND1-231ENST00000532463 MAP9Q49MG5 647 aa9.65□□□□□ -0.86
CTNND1-231ENST00000532463 DACH1Q9UI36 760 aa9.65□□□□□ -0.86
CTNND1-231ENST00000532463 SERPINC1P01008 464 aa9.65□□□□□ -0.87
CTNND1-231ENST00000532463 IRX3P78415 501 aaPredicted RBP9.65□□□□□ -0.87
CTNND1-231ENST00000532463 PHLDB1Q86UU1 1377 aa9.65□□□□□ -0.87
CTNND1-231ENST00000532463 GIGYF2Q6Y7W6 1299 aaKnown RBP9.65□□□□□ -0.87
CTNND1-231ENST00000532463 TAF4BQ92750 862 aa9.65□□□□□ -0.87
CTNND1-231ENST00000532463 CCDC9Q9Y3X0 531 aaKnown RBP9.65□□□□□ -0.87
CTNND1-231ENST00000532463 NEBLO76041 1014 aa9.64□□□□□ -0.87
CTNND1-231ENST00000532463 CBFA2T2O43439 604 aa9.64□□□□□ -0.87
CTNND1-231ENST00000532463 TRAK2O60296 914 aa9.64□□□□□ -0.87
CTNND1-231ENST00000532463 MCM3P25205 808 aa9.64□□□□□ -0.87
CTNND1-231ENST00000532463 MNAT1P51948 309 aa9.64□□□□□ -0.87
CTNND1-231ENST00000532463 INTS3Q68E01 1043 aaKnown RBP9.64□□□□□ -0.87
CTNND1-231ENST00000532463 FMNL2Q96PY5 1086 aa9.64□□□□□ -0.87
CTNND1-231ENST00000532463 RALYLQ86SE5 291 aaKnown RBP9.64□□□□□ -0.87
CTNND1-231ENST00000532463 DCAF11Q8TEB1 546 aa9.64□□□□□ -0.87
CTNND1-231ENST00000532463 CDK5RAP3Q96JB5 506 aa9.64□□□□□ -0.87
CTNND1-231ENST00000532463 ZWINTO95229 277 aa9.64□□□□□ -0.87
CTNND1-231ENST00000532463 IFIT2P09913 472 aaKnown RBP9.64□□□□□ -0.87
CTNND1-231ENST00000532463 KIF3CO14782 793 aa9.63□□□□□ -0.87
CTNND1-231ENST00000532463 DNAAF4Q8WXU2 420 aa9.63□□□□□ -0.87
CTNND1-231ENST00000532463 PAIP2Q9BPZ3 127 aaKnown RBP9.63□□□□□ -0.87
CTNND1-231ENST00000532463 GCOM1H8Y6P7 765 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-231ENST00000532463 MYZAPP0CAP1 466 aa9.63□□□□□ -0.87
CTNND1-231ENST00000532463 SPECC1LQ69YQ0 1117 aa9.63□□□□□ -0.87
CTNND1-231ENST00000532463 STIM1Q13586 685 aa9.63□□□□□ -0.87
CTNND1-231ENST00000532463 SPC24Q8NBT2 197 aa9.63□□□□□ -0.87
CTNND1-231ENST00000532463 CCDC148Q8NFR7 591 aa9.63□□□□□ -0.87
CTNND1-231ENST00000532463 NAP1L3Q99457 506 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-231ENST00000532463 CFDP1Q9UEE9 299 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-231ENST00000532463 KIF2AO00139 706 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-231ENST00000532463 CETN2P41208 172 aa9.63□□□□□ -0.87
CTNND1-231ENST00000532463 ZKSCAN2Q63HK3 967 aa9.62□□□□□ -0.87
CTNND1-231ENST00000532463 CCDC113Q9H0I3 377 aa9.62□□□□□ -0.87
CTNND1-231ENST00000532463 KRT18P05783 430 aaKnown RBP9.62□□□□□ -0.87
CTNND1-231ENST00000532463 FOSBP53539 338 aa9.62□□□□□ -0.87
CTNND1-231ENST00000532463 DDX46Q7L014 1031 aaKnown RBP9.62□□□□□ -0.87
CTNND1-231ENST00000532463 CCDC192P0DO97 292 aa9.62□□□□□ -0.87
CTNND1-231ENST00000532463 FAM184BQ9ULE4 1060 aa9.62□□□□□ -0.87
CTNND1-231ENST00000532463 PDCP20941 246 aa9.61□□□□□ -0.87
CTNND1-231ENST00000532463 SOGA3Q5TF21 947 aa9.61□□□□□ -0.87
CTNND1-231ENST00000532463 ZNF396Q96N95 335 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-231ENST00000532463 BRPF3Q9ULD4 1205 aa9.61□□□□□ -0.87
CTNND1-231ENST00000532463 PAK3O75914 559 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-231ENST00000532463 FBF1Q8TES7 1133 aa9.61□□□□□ -0.87
CTNND1-231ENST00000532463 TNIKQ9UKE5 1360 aa9.61□□□□□ -0.87
CTNND1-231ENST00000532463 FOXD1Q16676 465 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 640.4 ms