RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 PROSER2Q86WR7 435 aaPredicted RBP30.39■■■□□ 2.46
PACSIN3-209ENST00000532457 PTCH1Q13635 1447 aa30.39■■■□□ 2.45
PACSIN3-209ENST00000532457 LTBP4Q8N2S1 1624 aa30.38■■■□□ 2.45
PACSIN3-209ENST00000532457 KNDC1Q76NI1 1749 aa30.37■■■□□ 2.45
PACSIN3-209ENST00000532457 PLEKHH1Q9ULM0 1364 aa30.37■■■□□ 2.45
PACSIN3-209ENST00000532457 SIRT1Q96EB6 747 aa30.37■■■□□ 2.45
PACSIN3-209ENST00000532457 POGKQ9P215 609 aa30.37■■■□□ 2.45
PACSIN3-209ENST00000532457 DLC1Q96QB1 1528 aa30.36■■■□□ 2.45
PACSIN3-209ENST00000532457 SLC24A1O60721 1099 aa30.36■■■□□ 2.45
PACSIN3-209ENST00000532457 ROBO2Q9HCK4 1378 aa30.33■■■□□ 2.45
PACSIN3-209ENST00000532457 CDCA8Q53HL2 280 aa30.33■■■□□ 2.45
PACSIN3-209ENST00000532457 FAM135BQ49AJ0 1406 aa30.32■■■□□ 2.44
PACSIN3-209ENST00000532457 MINK1Q8N4C8 1332 aaPredicted RBP30.32■■■□□ 2.44
PACSIN3-209ENST00000532457 LRRC7Q96NW7 1537 aa30.31■■■□□ 2.44
PACSIN3-209ENST00000532457 TMEM94Q12767 1356 aa30.3■■■□□ 2.44
PACSIN3-209ENST00000532457 NCOA3Q9Y6Q9 1424 aa30.3■■■□□ 2.44
PACSIN3-209ENST00000532457 TULP4Q9NRJ4 1543 aa30.29■■■□□ 2.44
PACSIN3-209ENST00000532457 PANK3Q9H999 370 aa30.27■■■□□ 2.44
PACSIN3-209ENST00000532457 EVC2Q86UK5 1308 aa30.27■■■□□ 2.44
PACSIN3-209ENST00000532457 C14orf37Q86TY3 774 aa30.26■■■□□ 2.44
PACSIN3-209ENST00000532457 PER1O15534 1290 aaPredicted RBP30.25■■■□□ 2.43
PACSIN3-209ENST00000532457 ANP32CO43423 234 aa30.25■■■□□ 2.43
PACSIN3-209ENST00000532457 RBM33Q96EV2 1170 aaKnown RBP30.25■■■□□ 2.43
PACSIN3-209ENST00000532457 CABP2Q9NPB3 220 aa30.24■■■□□ 2.43
PACSIN3-209ENST00000532457 CERKQ8TCT0 537 aa30.22■■■□□ 2.43
PACSIN3-209ENST00000532457 MYOM1P52179 1685 aa30.21■■■□□ 2.43
PACSIN3-209ENST00000532457 PUS7Q96PZ0 661 aaKnown RBP30.2■■■□□ 2.43
PACSIN3-209ENST00000532457 CDK19Q9BWU1 502 aa30.2■■■□□ 2.43
PACSIN3-209ENST00000532457 IQSEC2Q5JU85 1478 aa30.2■■■□□ 2.42
PACSIN3-209ENST00000532457 MSH6P52701 1360 aa30.19■■■□□ 2.42
PACSIN3-209ENST00000532457 C19orf44Q9H6X5 657 aa30.19■■■□□ 2.42
PACSIN3-209ENST00000532457 XIRP1Q702N8 1843 aaKnown RBP30.18■■■□□ 2.42
PACSIN3-209ENST00000532457 SLC12A5Q9H2X9 1139 aa30.18■■■□□ 2.42
PACSIN3-209ENST00000532457 ADGRL3Q9HAR2 1447 aa30.17■■■□□ 2.42
PACSIN3-209ENST00000532457 SRPK2P78362 688 aaKnown RBP30.16■■■□□ 2.42
PACSIN3-209ENST00000532457 PRKRIP1Q9H875 184 aaPredicted RBP30.16■■■□□ 2.42
PACSIN3-209ENST00000532457 CNGB1Q14028 1251 aaPredicted RBP30.15■■■□□ 2.42
PACSIN3-209ENST00000532457 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.14■■■□□ 2.42
PACSIN3-209ENST00000532457 TMC1Q8TDI8 760 aa30.13■■■□□ 2.41
PACSIN3-209ENST00000532457 NALCNQ8IZF0 1738 aa30.13■■■□□ 2.41
PACSIN3-209ENST00000532457 ATF3P18847 181 aa30.12■■■□□ 2.41
PACSIN3-209ENST00000532457 WASLO00401 505 aaPredicted RBP30.12■■■□□ 2.41
PACSIN3-209ENST00000532457 CARD14Q9BXL6 1004 aa30.12■■■□□ 2.41
PACSIN3-209ENST00000532457 DCCP43146 1447 aa30.12■■■□□ 2.41
PACSIN3-209ENST00000532457 CADPS2Q86UW7 1296 aa30.11■■■□□ 2.41
PACSIN3-209ENST00000532457 ADGRB2O60241 1585 aa30.07■■■□□ 2.4
PACSIN3-209ENST00000532457 CDC42BPGQ6DT37 1551 aa30.06■■■□□ 2.4
PACSIN3-209ENST00000532457 TOM1O60784 492 aa30.05■■■□□ 2.4
PACSIN3-209ENST00000532457 CCER2I3L3R5 266 aa30.03■■■□□ 2.4
PACSIN3-209ENST00000532457 ATAD2Q6PL18 1390 aa30.03■■■□□ 2.4
PACSIN3-209ENST00000532457 AMER1Q5JTC6 1135 aaPredicted RBP30.02■■■□□ 2.4
PACSIN3-209ENST00000532457 CABP1Q9NZU7 370 aa30.02■■■□□ 2.4
PACSIN3-209ENST00000532457 KNSTRNQ9Y448 316 aa30.02■■■□□ 2.4
PACSIN3-209ENST00000532457 CCDC184Q52MB2 194 aa30.01■■■□□ 2.4
PACSIN3-209ENST00000532457 CC2D1BQ5T0F9 858 aaKnown RBP30.01■■■□□ 2.39
PACSIN3-209ENST00000532457 NUDT16Q96DE0 195 aaKnown RBP30■■■□□ 2.39
PACSIN3-209ENST00000532457 PRR36Q9H6K5 1346 aa30■■■□□ 2.39
PACSIN3-209ENST00000532457 UBAP1LF5GYI3 381 aa29.99■■■□□ 2.39
PACSIN3-209ENST00000532457 SLAIN2Q9P270 581 aa29.99■■■□□ 2.39
PACSIN3-209ENST00000532457 CD163L1Q9NR16 1453 aa29.97■■■□□ 2.39
PACSIN3-209ENST00000532457 ANKRD36BQ8N2N9 1353 aa29.96■■■□□ 2.39
PACSIN3-209ENST00000532457 NUTM2FA1L443 756 aa29.96■■■□□ 2.39
PACSIN3-209ENST00000532457 FMN2Q9NZ56 1722 aa29.95■■■□□ 2.39
PACSIN3-209ENST00000532457 NINLQ9Y2I6 1382 aa29.95■■■□□ 2.38
PACSIN3-209ENST00000532457 KTN1Q86UP2 1357 aaKnown RBP29.94■■■□□ 2.38
PACSIN3-209ENST00000532457 MST1RQ04912 1400 aa29.94■■■□□ 2.38
PACSIN3-209ENST00000532457 A0A1W2PP64 1363 aa29.94■■■□□ 2.38
PACSIN3-209ENST00000532457 PARD3Q8TEW0 1356 aa29.94■■■□□ 2.38
PACSIN3-209ENST00000532457 RALBP1Q15311 655 aa29.93■■■□□ 2.38
PACSIN3-209ENST00000532457 NSD3Q9BZ95 1437 aa29.93■■■□□ 2.38
PACSIN3-209ENST00000532457 CCDC61Q9Y6R9 512 aa29.93■■■□□ 2.38
PACSIN3-209ENST00000532457 ANKARQ7Z5J8 1434 aa29.92■■■□□ 2.38
PACSIN3-209ENST00000532457 ATP7BP35670 1465 aa29.92■■■□□ 2.38
PACSIN3-209ENST00000532457 C1orf167Q5SNV9 1468 aa29.91■■■□□ 2.38
PACSIN3-209ENST00000532457 PPIP5K1Q6PFW1 1433 aa29.9■■■□□ 2.38
PACSIN3-209ENST00000532457 TERF2IPQ9NYB0 399 aa29.89■■■□□ 2.38
PACSIN3-209ENST00000532457 NPC1L1Q9UHC9 1359 aa29.88■■■□□ 2.37
PACSIN3-209ENST00000532457 ESCO1Q5FWF5 840 aa29.87■■■□□ 2.37
PACSIN3-209ENST00000532457 PIP4K2BP78356 416 aa29.86■■■□□ 2.37
PACSIN3-209ENST00000532457 USP32Q8NFA0 1604 aa29.86■■■□□ 2.37
PACSIN3-209ENST00000532457 SCAF1Q9H7N4 1312 aaKnown RBP29.85■■■□□ 2.37
PACSIN3-209ENST00000532457 MYBBP1AQ9BQG0 1328 aaKnown RBP29.84■■■□□ 2.37
PACSIN3-209ENST00000532457 HDGFL2Q7Z4V5 671 aaPredicted RBP29.84■■■□□ 2.37
PACSIN3-209ENST00000532457 CPSF1Q10570 1443 aaKnown RBP29.84■■■□□ 2.37
PACSIN3-209ENST00000532457 YTHDC1Q96MU7 727 aaKnown RBP29.83■■■□□ 2.37
PACSIN3-209ENST00000532457 ORAI2Q96SN7 254 aa29.82■■■□□ 2.36
PACSIN3-209ENST00000532457 PLEKHG3A1L390 1219 aa29.82■■■□□ 2.36
PACSIN3-209ENST00000532457 ITSN1Q15811 1721 aa29.82■■■□□ 2.36
PACSIN3-209ENST00000532457 RGPD8O14715 1765 aaPredicted RBP29.81■■■□□ 2.36
PACSIN3-209ENST00000532457 BRINP3Q76B58 766 aa29.81■■■□□ 2.36
PACSIN3-209ENST00000532457 MRS2Q9HD23 443 aa29.81■■■□□ 2.36
PACSIN3-209ENST00000532457 PHF8Q9UPP1 1060 aa29.8■■■□□ 2.36
PACSIN3-209ENST00000532457 TOPAZ1Q8N9V7 1692 aa29.8■■■□□ 2.36
PACSIN3-209ENST00000532457 CGNL1Q0VF96 1302 aa29.79■■■□□ 2.36
PACSIN3-209ENST00000532457 ROBO1Q9Y6N7 1651 aa29.79■■■□□ 2.36
PACSIN3-209ENST00000532457 FYB1O15117 783 aa29.77■■■□□ 2.36
PACSIN3-209ENST00000532457 FBXO41Q8TF61 875 aa29.77■■■□□ 2.36
PACSIN3-209ENST00000532457 ACEP12821 1306 aa29.77■■■□□ 2.36
PACSIN3-209ENST00000532457 PPP2R1AP30153 589 aa29.76■■■□□ 2.35
PACSIN3-209ENST00000532457 PMFBP1Q8TBY8 1022 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms