RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 DRC7Q8IY82 874 aa13.98□□□□□ -0.17
PTPRK-221ENST00000532331 CAMSAP2Q08AD1 1489 aa13.97□□□□□ -0.17
PTPRK-221ENST00000532331 ZC3H6P61129 1189 aaKnown RBP13.97□□□□□ -0.17
PTPRK-221ENST00000532331 PRKRIP1Q9H875 184 aaPredicted RBP13.97□□□□□ -0.17
PTPRK-221ENST00000532331 NBPF1Q3BBV0 1214 aa13.97□□□□□ -0.17
PTPRK-221ENST00000532331 API5Q9BZZ5 524 aaKnown RBP13.97□□□□□ -0.17
PTPRK-221ENST00000532331 MFAP1P55081 439 aaKnown RBP13.97□□□□□ -0.17
PTPRK-221ENST00000532331 NGLY1Q96IV0 654 aa13.97□□□□□ -0.17
PTPRK-221ENST00000532331 MTHFSP49914 203 aa13.97□□□□□ -0.17
PTPRK-221ENST00000532331 AMOTL2Q9Y2J4 779 aa13.97□□□□□ -0.17
PTPRK-221ENST00000532331 TOM1O60784 492 aa13.96□□□□□ -0.17
PTPRK-221ENST00000532331 CHAF1AQ13111 956 aaPredicted RBP13.96□□□□□ -0.17
PTPRK-221ENST00000532331 FAM177BA6PVY3 158 aa13.96□□□□□ -0.18
PTPRK-221ENST00000532331 UBAP1LF5GYI3 381 aa13.96□□□□□ -0.18
PTPRK-221ENST00000532331 KCNH5Q8NCM2 988 aa13.96□□□□□ -0.18
PTPRK-221ENST00000532331 NUDT16Q96DE0 195 aaKnown RBP13.95□□□□□ -0.18
PTPRK-221ENST00000532331 VPS53Q5VIR6 699 aa13.95□□□□□ -0.18
PTPRK-221ENST00000532331 ATAD2Q6PL18 1390 aa13.95□□□□□ -0.18
PTPRK-221ENST00000532331 RAD21O60216 631 aa13.95□□□□□ -0.18
PTPRK-221ENST00000532331 SLC12A5Q9H2X9 1139 aa13.95□□□□□ -0.18
PTPRK-221ENST00000532331 G3BP1Q13283 466 aaKnown RBP eCLIP13.95□□□□□ -0.181e-7■■■■□ 21.6
PTPRK-221ENST00000532331 CWC22Q9HCG8 908 aaKnown RBP13.95□□□□□ -0.18
PTPRK-221ENST00000532331 MSNP26038 577 aaKnown RBP13.94□□□□□ -0.18
PTPRK-221ENST00000532331 CCDC61Q9Y6R9 512 aa13.94□□□□□ -0.18
PTPRK-221ENST00000532331 ZNF530Q6P9A1 599 aaPredicted RBP13.94□□□□□ -0.18
PTPRK-221ENST00000532331 LRPPRCP42704 1394 aaKnown RBP13.94□□□□□ -0.18
PTPRK-221ENST00000532331 TNRQ92752 1358 aa13.93□□□□□ -0.18
PTPRK-221ENST00000532331 KIF7Q2M1P5 1343 aa13.93□□□□□ -0.18
PTPRK-221ENST00000532331 SLKQ9H2G2 1235 aaPredicted RBP13.93□□□□□ -0.18
PTPRK-221ENST00000532331 ROCK1Q13464 1354 aa13.93□□□□□ -0.18
PTPRK-221ENST00000532331 MARCH6O60337 910 aa13.93□□□□□ -0.18
PTPRK-221ENST00000532331 PCF11O94913 1555 aaKnown RBP13.93□□□□□ -0.18
PTPRK-221ENST00000532331 IFIT2P09913 472 aaKnown RBP13.92□□□□□ -0.18
PTPRK-221ENST00000532331 WAPLQ7Z5K2 1190 aa13.92□□□□□ -0.18
PTPRK-221ENST00000532331 RILPL2Q969X0 211 aa13.92□□□□□ -0.18
PTPRK-221ENST00000532331 SYAP1Q96A49 352 aaPredicted RBP13.92□□□□□ -0.18
PTPRK-221ENST00000532331 IDI1Q13907 227 aa13.92□□□□□ -0.18
PTPRK-221ENST00000532331 CADPS2Q86UW7 1296 aa13.91□□□□□ -0.18
PTPRK-221ENST00000532331 PHF8Q9UPP1 1060 aa13.91□□□□□ -0.18
PTPRK-221ENST00000532331 CCDC7Q96M83 1385 aa13.91□□□□□ -0.18
PTPRK-221ENST00000532331 PRKAR2BP31323 418 aa13.91□□□□□ -0.18
PTPRK-221ENST00000532331 SULT6B1Q6IMI4 303 aa13.9□□□□□ -0.18
PTPRK-221ENST00000532331 FOXO3O43524 673 aa13.9□□□□□ -0.18
PTPRK-221ENST00000532331 DHX29Q7Z478 1369 aaKnown RBP13.9□□□□□ -0.18
PTPRK-221ENST00000532331 CCDC30Q5VVM6 783 aa13.9□□□□□ -0.18
PTPRK-221ENST00000532331 RASSF8Q8NHQ8 419 aa13.9□□□□□ -0.18
PTPRK-221ENST00000532331 APPP05067 770 aa13.89□□□□□ -0.19
PTPRK-221ENST00000532331 CCDC34Q96HJ3 373 aa13.89□□□□□ -0.19
PTPRK-221ENST00000532331 MSH6P52701 1360 aa13.89□□□□□ -0.19
PTPRK-221ENST00000532331 WDR7Q9Y4E6 1490 aa13.89□□□□□ -0.19
PTPRK-221ENST00000532331 ANKRD45Q5TZF3 282 aa13.89□□□□□ -0.19
PTPRK-221ENST00000532331 RTN4Q9NQC3 1192 aaKnown RBP13.89□□□□□ -0.19
PTPRK-221ENST00000532331 PNISRQ8TF01 805 aaKnown RBP13.89□□□□□ -0.19
PTPRK-221ENST00000532331 FAM135AQ9P2D6 1515 aa13.88□□□□□ -0.19
PTPRK-221ENST00000532331 SYNE3Q6ZMZ3 975 aa13.88□□□□□ -0.19
PTPRK-221ENST00000532331 HSP90AB4PQ58FF6 505 aa13.88□□□□□ -0.19
PTPRK-221ENST00000532331 DIAPH3Q9NSV4 1193 aa13.88□□□□□ -0.19
PTPRK-221ENST00000532331 PLIN1O60240 522 aa13.88□□□□□ -0.19
PTPRK-221ENST00000532331 AKAP17AQ02040 695 aaKnown RBP13.88□□□□□ -0.19
PTPRK-221ENST00000532331 CSPP1Q1MSJ5 1256 aa13.88□□□□□ -0.19
PTPRK-221ENST00000532331 DDX19BQ9UMR2 479 aa13.87□□□□□ -0.19
PTPRK-221ENST00000532331 BIVM-ERCC5R4GMW8 1640 aa13.87□□□□□ -0.19
PTPRK-221ENST00000532331 NCBP3Q53F19 620 aaKnown RBP13.87□□□□□ -0.19
PTPRK-221ENST00000532331 ST18O60284 1047 aa13.87□□□□□ -0.19
PTPRK-221ENST00000532331 KIF16BQ96L93 1317 aa13.86□□□□□ -0.19
PTPRK-221ENST00000532331 CENPQQ7L2Z9 268 aaPredicted RBP13.86□□□□□ -0.19
PTPRK-221ENST00000532331 NEUROD6Q96NK8 337 aa13.86□□□□□ -0.19
PTPRK-221ENST00000532331 KIF3AQ9Y496 699 aa13.86□□□□□ -0.19
PTPRK-221ENST00000532331 CNTLNQ9NXG0 1405 aa13.86□□□□□ -0.19
PTPRK-221ENST00000532331 TPM4P67936 248 aa13.86□□□□□ -0.19
PTPRK-221ENST00000532331 RRS1Q15050 365 aaKnown RBP13.85□□□□□ -0.19
PTPRK-221ENST00000532331 KRT28Q7Z3Y7 464 aa13.85□□□□□ -0.19
PTPRK-221ENST00000532331 DZIP1LQ8IYY4 767 aaKnown RBP13.85□□□□□ -0.19
PTPRK-221ENST00000532331 TCEAL9Q9UHQ7 104 aa13.85□□□□□ -0.19
PTPRK-221ENST00000532331 PLCH2O75038 1416 aa13.85□□□□□ -0.19
PTPRK-221ENST00000532331 RUFY2Q8WXA3 655 aa13.85□□□□□ -0.19
PTPRK-221ENST00000532331 ABCC5O15440 1437 aa13.85□□□□□ -0.19
PTPRK-221ENST00000532331 KIAA2012Q0VF49 1180 aa13.85□□□□□ -0.19
PTPRK-221ENST00000532331 ZBED9Q6R2W3 1325 aa13.85□□□□□ -0.19
PTPRK-221ENST00000532331 UBTFL1P0CB47 393 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-221ENST00000532331 GZF1Q9H116 711 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-221ENST00000532331 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.85□□□□□ -0.195e-6■■□□□ 12.8
PTPRK-221ENST00000532331 CCDC27Q2M243 656 aa13.84□□□□□ -0.19
PTPRK-221ENST00000532331 DHX16O60231 1041 aaKnown RBP13.84□□□□□ -0.19
PTPRK-221ENST00000532331 NOL8Q76FK4 1167 aaKnown RBP13.84□□□□□ -0.19
PTPRK-221ENST00000532331 CHMP4CQ96CF2 233 aa13.84□□□□□ -0.19
PTPRK-221ENST00000532331 DEKP35659 375 aaKnown RBP13.84□□□□□ -0.19
PTPRK-221ENST00000532331 COG6Q9Y2V7 657 aa13.84□□□□□ -0.19
PTPRK-221ENST00000532331 IPO9Q96P70 1041 aaKnown RBP13.84□□□□□ -0.19
PTPRK-221ENST00000532331 HSPA2P54652 639 aa13.83□□□□□ -0.2
PTPRK-221ENST00000532331 RRP1P56182 461 aaKnown RBP13.83□□□□□ -0.2
PTPRK-221ENST00000532331 PTPN23Q9H3S7 1636 aa13.83□□□□□ -0.2
PTPRK-221ENST00000532331 PPP2R1AP30153 589 aa13.83□□□□□ -0.2
PTPRK-221ENST00000532331 ZNF518AQ6AHZ1 1483 aa13.83□□□□□ -0.2
PTPRK-221ENST00000532331 ATP10BO94823 1461 aa13.82□□□□□ -0.2
PTPRK-221ENST00000532331 RAPGEF6Q8TEU7 1601 aa13.82□□□□□ -0.2
PTPRK-221ENST00000532331 TCP11L2Q8N4U5 519 aa13.82□□□□□ -0.2
PTPRK-221ENST00000532331 KIF21AQ7Z4S6 1674 aa13.82□□□□□ -0.2
PTPRK-221ENST00000532331 TMOD3Q9NYL9 352 aa13.82□□□□□ -0.2
PTPRK-221ENST00000532331 WASLO00401 505 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms