RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 WASLO00401 505 aaPredicted RBP14.64□□□□□ -0.07
CSRP1-215ENST00000532313 CABP4P57796 275 aa14.64□□□□□ -0.07
CSRP1-215ENST00000532313 KIF6Q6ZMV9 814 aa14.64□□□□□ -0.07
CSRP1-215ENST00000532313 SHANK2Q9UPX8 1470 aa14.64□□□□□ -0.07
CSRP1-215ENST00000532313 NCKAP5LQ9HCH0 1330 aa14.63□□□□□ -0.07
CSRP1-215ENST00000532313 NINLQ9Y2I6 1382 aa14.63□□□□□ -0.07
CSRP1-215ENST00000532313 FOXO3O43524 673 aa14.62□□□□□ -0.07
CSRP1-215ENST00000532313 SLC4A10Q6U841 1118 aa14.62□□□□□ -0.07
CSRP1-215ENST00000532313 RBM42Q9BTD8 480 aaKnown RBP14.62□□□□□ -0.07
CSRP1-215ENST00000532313 AMOTL1Q8IY63 956 aa14.62□□□□□ -0.07
CSRP1-215ENST00000532313 DDX54Q8TDD1 881 aaKnown RBP14.61□□□□□ -0.07
CSRP1-215ENST00000532313 TSPYL4Q9UJ04 414 aa14.61□□□□□ -0.07
CSRP1-215ENST00000532313 CHD1O14646 1710 aa14.61□□□□□ -0.07
CSRP1-215ENST00000532313 MAPKBP1O60336 1514 aa14.61□□□□□ -0.07
CSRP1-215ENST00000532313 KIAA1211Q6ZU35 1233 aa14.61□□□□□ -0.07
CSRP1-215ENST00000532313 RUNDC1Q96C34 613 aa14.61□□□□□ -0.07
CSRP1-215ENST00000532313 KCNA6P17658 529 aa14.61□□□□□ -0.07
CSRP1-215ENST00000532313 BECN1Q14457 450 aa14.61□□□□□ -0.07
CSRP1-215ENST00000532313 ZC3H6P61129 1189 aaKnown RBP14.6□□□□□ -0.07
CSRP1-215ENST00000532313 ANP32BQ92688 251 aaKnown RBP14.6□□□□□ -0.07
CSRP1-215ENST00000532313 EXOC5O00471 708 aa14.6□□□□□ -0.07
CSRP1-215ENST00000532313 ITPRIPQ8IWB1 547 aa14.6□□□□□ -0.07
CSRP1-215ENST00000532313 C14orf93Q9H972 538 aaKnown RBP14.6□□□□□ -0.07
CSRP1-215ENST00000532313 PPP1R1BQ9UD71 204 aaPredicted RBP14.6□□□□□ -0.07
CSRP1-215ENST00000532313 NCLP19338 710 aaKnown RBP14.59□□□□□ -0.07
CSRP1-215ENST00000532313 EIF2S2P20042 333 aaKnown RBP14.59□□□□□ -0.07
CSRP1-215ENST00000532313 TRIM34Q9BYJ4 488 aa14.59□□□□□ -0.07
CSRP1-215ENST00000532313 C9orf78Q9NZ63 289 aaPredicted RBP14.59□□□□□ -0.07
CSRP1-215ENST00000532313 E9PSI1 815 aa14.59□□□□□ -0.07
CSRP1-215ENST00000532313 RIPK4P57078 832 aa14.59□□□□□ -0.07
CSRP1-215ENST00000532313 XPCQ01831 940 aaPredicted RBP14.59□□□□□ -0.07
CSRP1-215ENST00000532313 RWDD1Q9H446 243 aaPredicted RBP14.59□□□□□ -0.07
CSRP1-215ENST00000532313 ZNF530Q6P9A1 599 aaPredicted RBP14.59□□□□□ -0.07
CSRP1-215ENST00000532313 VPS37DQ86XT2 251 aa14.58□□□□□ -0.08
CSRP1-215ENST00000532313 ATP7AQ04656 1500 aa14.58□□□□□ -0.08
CSRP1-215ENST00000532313 NOS1P29475 1434 aa14.58□□□□□ -0.08
CSRP1-215ENST00000532313 AMOTQ4VCS5 1084 aa14.58□□□□□ -0.08
CSRP1-215ENST00000532313 API5Q9BZZ5 524 aaKnown RBP14.58□□□□□ -0.08
CSRP1-215ENST00000532313 WAPLQ7Z5K2 1190 aa14.57□□□□□ -0.08
CSRP1-215ENST00000532313 CCDC146Q8IYE0 955 aa14.57□□□□□ -0.08
CSRP1-215ENST00000532313 C11orf95C9JLR9 678 aaPredicted RBP14.57□□□□□ -0.08
CSRP1-215ENST00000532313 GTF3C3Q9Y5Q9 886 aa14.56□□□□□ -0.08
CSRP1-215ENST00000532313 TTC21AQ8NDW8 1320 aa14.56□□□□□ -0.08
CSRP1-215ENST00000532313 MTHFSP49914 203 aa14.56□□□□□ -0.08
CSRP1-215ENST00000532313 NBPF8Q3BBV2 869 aa14.56□□□□□ -0.08
CSRP1-215ENST00000532313 NBPF14Q5TI25 921 aa14.56□□□□□ -0.08
CSRP1-215ENST00000532313 RIC3Q7Z5B4 369 aa14.55□□□□□ -0.08
CSRP1-215ENST00000532313 STARD3NLO95772 234 aa14.55□□□□□ -0.08
CSRP1-215ENST00000532313 NBPF1Q3BBV0 1214 aa14.55□□□□□ -0.08
CSRP1-215ENST00000532313 ZNF652Q9Y2D9 606 aa14.55□□□□□ -0.08
CSRP1-215ENST00000532313 ZRSR1Q15695 479 aaKnown RBP14.54□□□□□ -0.08
CSRP1-215ENST00000532313 SLC12A5Q9H2X9 1139 aa14.54□□□□□ -0.08
CSRP1-215ENST00000532313 TMOD3Q9NYL9 352 aa14.53□□□□□ -0.08
CSRP1-215ENST00000532313 CDCA7Q9BWT1 371 aaPredicted RBP14.53□□□□□ -0.08
CSRP1-215ENST00000532313 KDM6BO15054 1643 aa14.53□□□□□ -0.08
CSRP1-215ENST00000532313 HMOX1P09601 288 aa14.52□□□□□ -0.08
CSRP1-215ENST00000532313 HSP90AB4PQ58FF6 505 aa14.52□□□□□ -0.08
CSRP1-215ENST00000532313 CCDC30Q5VVM6 783 aa14.52□□□□□ -0.09
CSRP1-215ENST00000532313 CCDC7Q96M83 1385 aa14.52□□□□□ -0.09
CSRP1-215ENST00000532313 C8orf37Q96NL8 207 aa14.51□□□□□ -0.09
CSRP1-215ENST00000532313 NAP1L2Q9ULW6 460 aaPredicted RBP14.51□□□□□ -0.09
CSRP1-215ENST00000532313 RCAN3Q9UKA8 241 aa14.51□□□□□ -0.09
CSRP1-215ENST00000532313 ADGRF5Q8IZF2 1346 aa14.51□□□□□ -0.09
CSRP1-215ENST00000532313 CHMP4CQ96CF2 233 aa14.5□□□□□ -0.09
CSRP1-215ENST00000532313 GOLGA6L22H0YM25 854 aa14.5□□□□□ -0.09
CSRP1-215ENST00000532313 FKBP5Q13451 457 aaPredicted RBP14.5□□□□□ -0.09
CSRP1-215ENST00000532313 CTDP1Q9Y5B0 961 aaPredicted RBP14.5□□□□□ -0.09
CSRP1-215ENST00000532313 MAGI3Q5TCQ9 1506 aa14.5□□□□□ -0.09
CSRP1-215ENST00000532313 ABCA8O94911 1581 aa14.49□□□□□ -0.09
CSRP1-215ENST00000532313 TEX13AQ9BXU3 409 aaPredicted RBP14.49□□□□□ -0.09
CSRP1-215ENST00000532313 RRP7AQ9Y3A4 280 aaKnown RBP14.49□□□□□ -0.09
CSRP1-215ENST00000532313 TCOF1Q13428 1488 aaKnown RBP14.49□□□□□ -0.09
CSRP1-215ENST00000532313 SCAF11Q99590 1463 aaKnown RBP14.49□□□□□ -0.09
CSRP1-215ENST00000532313 SENP3-EIF4A1A0A087X0R7 540 aa14.49□□□□□ -0.09
CSRP1-215ENST00000532313 SULT6B1Q6IMI4 303 aa14.49□□□□□ -0.09
CSRP1-215ENST00000532313 TRPM2O94759 1503 aa14.49□□□□□ -0.09
CSRP1-215ENST00000532313 SAMD9Q5K651 1589 aa14.48□□□□□ -0.09
CSRP1-215ENST00000532313 KIF7Q2M1P5 1343 aa14.48□□□□□ -0.09
CSRP1-215ENST00000532313 TTC21BQ7Z4L5 1316 aa14.48□□□□□ -0.09
CSRP1-215ENST00000532313 SMARCC1Q92922 1105 aaPredicted RBP14.48□□□□□ -0.09
CSRP1-215ENST00000532313 ZPR1O75312 459 aa14.48□□□□□ -0.09
CSRP1-215ENST00000532313 RPRD2Q5VT52 1461 aaKnown RBP14.48□□□□□ -0.09
CSRP1-215ENST00000532313 ZKSCAN2Q63HK3 967 aa14.48□□□□□ -0.09
CSRP1-215ENST00000532313 BCL11BQ9C0K0 894 aaPredicted RBP14.48□□□□□ -0.09
CSRP1-215ENST00000532313 NSD2O96028 1365 aa14.47□□□□□ -0.09
CSRP1-215ENST00000532313 KIF16BQ96L93 1317 aa14.47□□□□□ -0.09
CSRP1-215ENST00000532313 FBXW7Q969H0 707 aa14.47□□□□□ -0.09
CSRP1-215ENST00000532313 PRKRIP1Q9H875 184 aaPredicted RBP14.47□□□□□ -0.09
CSRP1-215ENST00000532313 PRKAR2BP31323 418 aa14.46□□□□□ -0.09
CSRP1-215ENST00000532313 CWC22Q9HCG8 908 aaKnown RBP14.46□□□□□ -0.09
CSRP1-215ENST00000532313 G3BP1Q13283 466 aaKnown RBP eCLIP14.46□□□□□ -0.09
CSRP1-215ENST00000532313 A0A087WZG4 1122 aa14.46□□□□□ -0.1
CSRP1-215ENST00000532313 MLH3Q9UHC1 1453 aa14.46□□□□□ -0.1
CSRP1-215ENST00000532313 PUS7Q96PZ0 661 aaKnown RBP14.45□□□□□ -0.1
CSRP1-215ENST00000532313 ELL2O00472 640 aaPredicted RBP14.45□□□□□ -0.1
CSRP1-215ENST00000532313 APAF1O14727 1248 aa14.45□□□□□ -0.1
CSRP1-215ENST00000532313 ARHGEF10O15013 1369 aa14.45□□□□□ -0.1
CSRP1-215ENST00000532313 APBB1O00213 710 aa14.44□□□□□ -0.1
CSRP1-215ENST00000532313 TMEM2Q9UHN6 1383 aa14.44□□□□□ -0.1
CSRP1-215ENST00000532313 FCHSD2O94868 740 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms