RNA–Protein interactions for RNA: ENST00000532289.1

PTP4A2-214, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-214ENST00000532289 HRCP23327 699 aa30.25■■■□□ 2.43
PTP4A2-214ENST00000532289 UNC5CLQ8IV45 518 aa30.23■■■□□ 2.43
PTP4A2-214ENST00000532289 PSDA5PKW4 1024 aaPredicted RBP30.22■■■□□ 2.43
PTP4A2-214ENST00000532289 PXDNQ92626 1479 aa30.21■■■□□ 2.43
PTP4A2-214ENST00000532289 SLIT2O94813 1529 aa30.21■■■□□ 2.43
PTP4A2-214ENST00000532289 ZNF326Q5BKZ1 582 aaKnown RBP30.2■■■□□ 2.43
PTP4A2-214ENST00000532289 NPHP3Q7Z494 1330 aa30.19■■■□□ 2.42
PTP4A2-214ENST00000532289 ROBO2Q9HCK4 1378 aa30.18■■■□□ 2.42
PTP4A2-214ENST00000532289 NEXMIFQ5QGS0 1516 aa30.16■■■□□ 2.42
PTP4A2-214ENST00000532289 SEPT12Q8IYM1 358 aa30.15■■■□□ 2.42
PTP4A2-214ENST00000532289 APLP2Q06481 763 aa30.14■■■□□ 2.42
PTP4A2-214ENST00000532289 FAM50AQ14320 339 aaKnown RBP30.13■■■□□ 2.41
PTP4A2-214ENST00000532289 PRAG1Q86YV5 1406 aa30.12■■■□□ 2.41
PTP4A2-214ENST00000532289 ESCO1Q5FWF5 840 aa30.11■■■□□ 2.41
PTP4A2-214ENST00000532289 NUP155O75694 1391 aa30.1■■■□□ 2.41
PTP4A2-214ENST00000532289 ONECUT3O60422 494 aaPredicted RBP30.09■■■□□ 2.41
PTP4A2-214ENST00000532289 XPCQ01831 940 aaPredicted RBP30.09■■■□□ 2.41
PTP4A2-214ENST00000532289 FOXO3O43524 673 aa30.08■■■□□ 2.41
PTP4A2-214ENST00000532289 BAG6P46379 1132 aa30.08■■■□□ 2.41
PTP4A2-214ENST00000532289 KRT27Q7Z3Y8 459 aa30.08■■■□□ 2.41
PTP4A2-214ENST00000532289 HFM1A2PYH4 1435 aa30.06■■■□□ 2.4
PTP4A2-214ENST00000532289 USP32Q8NFA0 1604 aa30.05■■■□□ 2.4
PTP4A2-214ENST00000532289 VPS72Q15906 364 aa30.05■■■□□ 2.4
PTP4A2-214ENST00000532289 CDC42BPGQ6DT37 1551 aa30.05■■■□□ 2.4
PTP4A2-214ENST00000532289 LRPPRCP42704 1394 aaKnown RBP30.03■■■□□ 2.4
PTP4A2-214ENST00000532289 YY1P25490 414 aa30.02■■■□□ 2.4
PTP4A2-214ENST00000532289 LOC105371045A0A1W2PR82 267 aa30.01■■■□□ 2.39
PTP4A2-214ENST00000532289 CLTCL1P53675 1640 aa30■■■□□ 2.39
PTP4A2-214ENST00000532289 ROCK1Q13464 1354 aa30■■■□□ 2.39
PTP4A2-214ENST00000532289 NWD2Q9ULI1 1742 aa29.99■■■□□ 2.39
PTP4A2-214ENST00000532289 PLCH1Q4KWH8 1693 aa29.98■■■□□ 2.39
PTP4A2-214ENST00000532289 R3HDM1Q15032 1099 aaKnown RBP29.98■■■□□ 2.39
PTP4A2-214ENST00000532289 SPATA31A3Q5VYP0 1347 aa29.97■■■□□ 2.39
PTP4A2-214ENST00000532289 KIF1BO60333 1816 aa29.96■■■□□ 2.39
PTP4A2-214ENST00000532289 EN1Q05925 392 aaPredicted RBP29.96■■■□□ 2.39
PTP4A2-214ENST00000532289 RGPD1P0DJD0 1748 aa29.96■■■□□ 2.39
PTP4A2-214ENST00000532289 CCDC9Q9Y3X0 531 aaKnown RBP29.93■■■□□ 2.38
PTP4A2-214ENST00000532289 VGFO15240 615 aaPredicted RBP29.91■■■□□ 2.38
PTP4A2-214ENST00000532289 NAIPQ13075 1403 aa29.88■■■□□ 2.37
PTP4A2-214ENST00000532289 DISP2A7MBM2 1401 aa29.88■■■□□ 2.37
PTP4A2-214ENST00000532289 NUTM2FA1L443 756 aa29.87■■■□□ 2.37
PTP4A2-214ENST00000532289 KIF1AQ12756 1690 aa29.87■■■□□ 2.37
PTP4A2-214ENST00000532289 CCDC144AA2RUR9 1427 aa29.87■■■□□ 2.37
PTP4A2-214ENST00000532289 TNS1Q9HBL0 1735 aaKnown RBP29.85■■■□□ 2.37
PTP4A2-214ENST00000532289 A0A0G2JS52 829 aa29.84■■■□□ 2.37
PTP4A2-214ENST00000532289 HAP1P54257 671 aaPredicted RBP29.84■■■□□ 2.37
PTP4A2-214ENST00000532289 MYT1Q01538 1121 aa29.84■■■□□ 2.37
PTP4A2-214ENST00000532289 ABCA3Q99758 1704 aa29.84■■■□□ 2.37
PTP4A2-214ENST00000532289 KRT28Q7Z3Y7 464 aa29.83■■■□□ 2.37
PTP4A2-214ENST00000532289 CABLES1Q8TDN4 633 aa29.83■■■□□ 2.37
PTP4A2-214ENST00000532289 FAM98CQ17RN3 349 aaKnown RBP29.81■■■□□ 2.36
PTP4A2-214ENST00000532289 NRAPQ86VF7 1730 aa29.81■■■□□ 2.36
PTP4A2-214ENST00000532289 FMN2Q9NZ56 1722 aa29.81■■■□□ 2.36
PTP4A2-214ENST00000532289 TNS3Q68CZ2 1445 aa29.8■■■□□ 2.36
PTP4A2-214ENST00000532289 EZH2Q15910 746 aaKnown RBP29.79■■■□□ 2.36
PTP4A2-214ENST00000532289 PPLO60437 1756 aa29.78■■■□□ 2.36
PTP4A2-214ENST00000532289 FAM83GA6ND36 823 aa29.78■■■□□ 2.36
PTP4A2-214ENST00000532289 RPGRIP1LQ68CZ1 1315 aa29.77■■■□□ 2.36
PTP4A2-214ENST00000532289 FAM182BQ5T319 152 aa29.77■■■□□ 2.36
PTP4A2-214ENST00000532289 WAPLQ7Z5K2 1190 aa29.76■■■□□ 2.35
PTP4A2-214ENST00000532289 TECPR2O15040 1411 aa29.74■■■□□ 2.35
PTP4A2-214ENST00000532289 CAMKK2Q96RR4 588 aa29.74■■■□□ 2.35
PTP4A2-214ENST00000532289 PLEKHG5O94827 1062 aa29.72■■■□□ 2.35
PTP4A2-214ENST00000532289 PSME1Q06323 249 aa29.72■■■□□ 2.35
PTP4A2-214ENST00000532289 RGPD8O14715 1765 aaPredicted RBP29.72■■■□□ 2.35
PTP4A2-214ENST00000532289 ADGRB2O60241 1585 aa29.7■■■□□ 2.35
PTP4A2-214ENST00000532289 THSD7AQ9UPZ6 1657 aa29.69■■■□□ 2.34
PTP4A2-214ENST00000532289 SBNO1A3KN83 1393 aa29.69■■■□□ 2.34
PTP4A2-214ENST00000532289 PLEKHH1Q9ULM0 1364 aa29.68■■■□□ 2.34
PTP4A2-214ENST00000532289 BTG4Q9NY30 223 aa29.68■■■□□ 2.34
PTP4A2-214ENST00000532289 ARHGEF10O15013 1369 aa29.67■■■□□ 2.34
PTP4A2-214ENST00000532289 STK26Q9P289 416 aa29.67■■■□□ 2.34
PTP4A2-214ENST00000532289 KNDC1Q76NI1 1749 aa29.67■■■□□ 2.34
PTP4A2-214ENST00000532289 PARD3Q8TEW0 1356 aa29.66■■■□□ 2.34
PTP4A2-214ENST00000532289 PHF8Q9UPP1 1060 aa29.66■■■□□ 2.34
PTP4A2-214ENST00000532289 RREB1Q92766 1687 aa29.65■■■□□ 2.34
PTP4A2-214ENST00000532289 COL14A1Q05707 1796 aaKnown RBP29.64■■■□□ 2.34
PTP4A2-214ENST00000532289 DCAF8L1A6NGE4 600 aa29.64■■■□□ 2.34
PTP4A2-214ENST00000532289 LMOD2Q6P5Q4 547 aa29.64■■■□□ 2.34
PTP4A2-214ENST00000532289 SPATA31A5Q5VU36 1347 aa29.64■■■□□ 2.34
PTP4A2-214ENST00000532289 SPATA31A7Q8IWB4 1347 aa29.64■■■□□ 2.34
PTP4A2-214ENST00000532289 IFT172Q9UG01 1749 aa29.63■■■□□ 2.33
PTP4A2-214ENST00000532289 ABCC11Q96J66 1382 aa29.63■■■□□ 2.33
PTP4A2-214ENST00000532289 NRXN1Q9ULB1 1477 aa29.62■■■□□ 2.33
PTP4A2-214ENST00000532289 ITGAEP38570 1179 aa29.62■■■□□ 2.33
PTP4A2-214ENST00000532289 NUP188Q5SRE5 1749 aa29.62■■■□□ 2.33
PTP4A2-214ENST00000532289 TRIM37O94972 964 aa29.61■■■□□ 2.33
PTP4A2-214ENST00000532289 NINLQ9Y2I6 1382 aa29.6■■■□□ 2.33
PTP4A2-214ENST00000532289 APBA3O96018 575 aa29.58■■■□□ 2.33
PTP4A2-214ENST00000532289 IFFO2Q5TF58 517 aa29.58■■■□□ 2.33
PTP4A2-214ENST00000532289 FAM196AQ6ZSG2 479 aa29.58■■■□□ 2.33
PTP4A2-214ENST00000532289 PPP1R1BQ9UD71 204 aaPredicted RBP29.58■■■□□ 2.33
PTP4A2-214ENST00000532289 CAMTA1Q9Y6Y1 1673 aa29.57■■■□□ 2.32
PTP4A2-214ENST00000532289 SPON1Q9HCB6 807 aa29.57■■■□□ 2.32
PTP4A2-214ENST00000532289 ADGRF5Q8IZF2 1346 aa29.56■■■□□ 2.32
PTP4A2-214ENST00000532289 NBPF8Q3BBV2 869 aa29.54■■■□□ 2.32
PTP4A2-214ENST00000532289 NBPF14Q5TI25 921 aa29.54■■■□□ 2.32
PTP4A2-214ENST00000532289 RRBP1Q9P2E9 1410 aaKnown RBP29.54■■■□□ 2.32
PTP4A2-214ENST00000532289 KCNQ2O43526 872 aa29.53■■■□□ 2.32
PTP4A2-214ENST00000532289 TMEM132EQ6IEE7 984 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms