RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ADAMTS13Q76LX8 1427 aa17.88■□□□□ 0.45
COPB1-208ENST00000532088 AMER1Q5JTC6 1135 aaPredicted RBP17.87■□□□□ 0.45
COPB1-208ENST00000532088 NUTM2DQ5VT03 806 aaPredicted RBP17.87■□□□□ 0.45
COPB1-208ENST00000532088 TBX22Q9Y458 520 aa17.87■□□□□ 0.45
COPB1-208ENST00000532088 ALKQ9UM73 1620 aa17.87■□□□□ 0.45
COPB1-208ENST00000532088 MNX1P50219 401 aaPredicted RBP17.86■□□□□ 0.45
COPB1-208ENST00000532088 PIK3R4Q99570 1358 aa17.86■□□□□ 0.45
COPB1-208ENST00000532088 RALGAPBQ86X10 1494 aa17.86■□□□□ 0.45
COPB1-208ENST00000532088 SETD1AO15047 1707 aaKnown RBP17.85■□□□□ 0.45
COPB1-208ENST00000532088 TRPM1Q7Z4N2 1603 aa17.85■□□□□ 0.45
COPB1-208ENST00000532088 SPOCK2Q92563 424 aa17.85■□□□□ 0.45
COPB1-208ENST00000532088 NBPF8Q3BBV2 869 aa17.84■□□□□ 0.45
COPB1-208ENST00000532088 PIP4P2Q8N4L2 257 aa17.84■□□□□ 0.45
COPB1-208ENST00000532088 GPRASP1Q5JY77 1395 aa17.83■□□□□ 0.45
COPB1-208ENST00000532088 CHADLQ6NUI6 762 aa17.83■□□□□ 0.44
COPB1-208ENST00000532088 PRKAR2AP13861 404 aaKnown RBP17.81■□□□□ 0.44
COPB1-208ENST00000532088 CFAP70Q5T0N1 1121 aa17.81■□□□□ 0.44
COPB1-208ENST00000532088 ADGRB1O14514 1584 aa17.81■□□□□ 0.44
COPB1-208ENST00000532088 BCANQ96GW7 911 aa17.8■□□□□ 0.44
COPB1-208ENST00000532088 RTN4Q9NQC3 1192 aaKnown RBP17.8■□□□□ 0.44
COPB1-208ENST00000532088 ASXL1Q8IXJ9 1541 aa17.79■□□□□ 0.44
COPB1-208ENST00000532088 ROCK2O75116 1388 aaKnown RBP17.78■□□□□ 0.44
COPB1-208ENST00000532088 SLC26A8Q96RN1 970 aa17.77■□□□□ 0.44
COPB1-208ENST00000532088 METP08581 1390 aa17.77■□□□□ 0.43
COPB1-208ENST00000532088 LRPPRCP42704 1394 aaKnown RBP17.77■□□□□ 0.43
COPB1-208ENST00000532088 NWD1Q149M9 1564 aa17.76■□□□□ 0.43
COPB1-208ENST00000532088 TECPR2O15040 1411 aa17.76■□□□□ 0.43
COPB1-208ENST00000532088 ABCC11Q96J66 1382 aa17.76■□□□□ 0.43
COPB1-208ENST00000532088 KNDC1Q76NI1 1749 aa17.75■□□□□ 0.43
COPB1-208ENST00000532088 YTHDC2Q9H6S0 1430 aaKnown RBP17.75■□□□□ 0.43
COPB1-208ENST00000532088 CHD2O14647 1828 aaKnown RBP17.75■□□□□ 0.43
COPB1-208ENST00000532088 DLC1Q96QB1 1528 aa17.74■□□□□ 0.43
COPB1-208ENST00000532088 NBPF1Q3BBV0 1214 aa17.74■□□□□ 0.43
COPB1-208ENST00000532088 SIRT1Q96EB6 747 aa17.74■□□□□ 0.43
COPB1-208ENST00000532088 XRN1Q8IZH2 1706 aaKnown RBP17.73■□□□□ 0.43
COPB1-208ENST00000532088 KCNA6P17658 529 aa17.73■□□□□ 0.43
COPB1-208ENST00000532088 PTCH1Q13635 1447 aa17.72■□□□□ 0.43
COPB1-208ENST00000532088 PTPRUQ92729 1446 aa17.72■□□□□ 0.43
COPB1-208ENST00000532088 CARD11Q9BXL7 1154 aa17.72■□□□□ 0.43
COPB1-208ENST00000532088 CPS1P31327 1500 aa17.72■□□□□ 0.43
COPB1-208ENST00000532088 NKTRP30414 1462 aaKnown RBP17.71■□□□□ 0.43
COPB1-208ENST00000532088 TMEM132EQ6IEE7 984 aa17.71■□□□□ 0.43
COPB1-208ENST00000532088 FARP1Q9Y4F1 1045 aaPredicted RBP17.71■□□□□ 0.43
COPB1-208ENST00000532088 EIF3AQ14152 1382 aaKnown RBP17.7■□□□□ 0.42
COPB1-208ENST00000532088 FAM135BQ49AJ0 1406 aa17.7■□□□□ 0.42
COPB1-208ENST00000532088 AMOTL2Q9Y2J4 779 aa17.69■□□□□ 0.42
COPB1-208ENST00000532088 NUBP1P53384 320 aa17.68■□□□□ 0.42
COPB1-208ENST00000532088 ARHGEF28Q8N1W1 1705 aaKnown RBP17.67■□□□□ 0.42
COPB1-208ENST00000532088 NCOA3Q9Y6Q9 1424 aa17.66■□□□□ 0.42
COPB1-208ENST00000532088 USP47Q96K76 1375 aa17.66■□□□□ 0.42
COPB1-208ENST00000532088 SLC24A1O60721 1099 aa17.64■□□□□ 0.41
COPB1-208ENST00000532088 TRAK1Q9UPV9 953 aa17.64■□□□□ 0.41
COPB1-208ENST00000532088 ROBO2Q9HCK4 1378 aa17.64■□□□□ 0.41
COPB1-208ENST00000532088 STRCP1A6NGW2 1772 aa17.63■□□□□ 0.41
COPB1-208ENST00000532088 EIF4G2P78344 907 aaKnown RBP eCLIP17.63■□□□□ 0.41
COPB1-208ENST00000532088 STK26Q9P289 416 aa17.63■□□□□ 0.41
COPB1-208ENST00000532088 SBNO2Q9Y2G9 1366 aa17.63■□□□□ 0.41
COPB1-208ENST00000532088 ZNF335Q9H4Z2 1342 aaPredicted RBP17.62■□□□□ 0.41
COPB1-208ENST00000532088 CENPJQ9HC77 1338 aaPredicted RBP17.61■□□□□ 0.41
COPB1-208ENST00000532088 LTBP4Q8N2S1 1624 aa17.61■□□□□ 0.41
COPB1-208ENST00000532088 PRAM1Q96QH2 718 aa17.59■□□□□ 0.41
COPB1-208ENST00000532088 POGKQ9P215 609 aa17.59■□□□□ 0.41
COPB1-208ENST00000532088 ADGRB2O60241 1585 aa17.58■□□□□ 0.41
COPB1-208ENST00000532088 LRRC7Q96NW7 1537 aa17.58■□□□□ 0.41
COPB1-208ENST00000532088 PROSER2Q86WR7 435 aaPredicted RBP17.57■□□□□ 0.4
COPB1-208ENST00000532088 QRICH2Q9H0J4 1663 aa17.57■□□□□ 0.4
COPB1-208ENST00000532088 PLEKHH1Q9ULM0 1364 aa17.56■□□□□ 0.4
COPB1-208ENST00000532088 ST20-MTHFSA0A0A6YYL1 179 aa17.56■□□□□ 0.4
COPB1-208ENST00000532088 HSPA5P11021 654 aaKnown RBP17.56■□□□□ 0.4
COPB1-208ENST00000532088 WAPLQ7Z5K2 1190 aa17.56■□□□□ 0.4
COPB1-208ENST00000532088 ADGRL3Q9HAR2 1447 aa17.55■□□□□ 0.4
COPB1-208ENST00000532088 TMEM94Q12767 1356 aa17.55■□□□□ 0.4
COPB1-208ENST00000532088 DCCP43146 1447 aa17.55■□□□□ 0.4
COPB1-208ENST00000532088 RASEFQ8IZ41 740 aa17.54■□□□□ 0.4
COPB1-208ENST00000532088 TESK2Q96S53 571 aa17.54■□□□□ 0.4
COPB1-208ENST00000532088 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.54■□□□□ 0.4
COPB1-208ENST00000532088 IQSEC2Q5JU85 1478 aa17.54■□□□□ 0.4
COPB1-208ENST00000532088 CDC42BPGQ6DT37 1551 aa17.53■□□□□ 0.4
COPB1-208ENST00000532088 PUS7Q96PZ0 661 aaKnown RBP17.52■□□□□ 0.4
COPB1-208ENST00000532088 NALCNQ8IZF0 1738 aa17.52■□□□□ 0.39
COPB1-208ENST00000532088 XIRP1Q702N8 1843 aaKnown RBP17.51■□□□□ 0.39
COPB1-208ENST00000532088 GSE1Q14687 1217 aa17.51■□□□□ 0.39
COPB1-208ENST00000532088 C19orf44Q9H6X5 657 aa17.51■□□□□ 0.39
COPB1-208ENST00000532088 CIZ1Q9ULV3 898 aaPredicted RBP17.5■□□□□ 0.39
COPB1-208ENST00000532088 MSH6P52701 1360 aa17.5■□□□□ 0.39
COPB1-208ENST00000532088 EVC2Q86UK5 1308 aa17.49■□□□□ 0.39
COPB1-208ENST00000532088 TMF1P82094 1093 aa17.49■□□□□ 0.39
COPB1-208ENST00000532088 CDCA8Q53HL2 280 aa17.49■□□□□ 0.39
COPB1-208ENST00000532088 FAM212AQ96EL1 285 aa17.49■□□□□ 0.39
COPB1-208ENST00000532088 MINK1Q8N4C8 1332 aaPredicted RBP17.48■□□□□ 0.39
COPB1-208ENST00000532088 TULP4Q9NRJ4 1543 aa17.48■□□□□ 0.39
COPB1-208ENST00000532088 SAFB2Q14151 953 aaKnown RBP eCLIP17.48■□□□□ 0.39
COPB1-208ENST00000532088 WASLO00401 505 aaPredicted RBP17.47■□□□□ 0.39
COPB1-208ENST00000532088 DCAF8Q5TAQ9 597 aa17.47■□□□□ 0.39
COPB1-208ENST00000532088 ANKARQ7Z5J8 1434 aa17.47■□□□□ 0.39
COPB1-208ENST00000532088 C14orf37Q86TY3 774 aa17.46■□□□□ 0.39
COPB1-208ENST00000532088 CADPS2Q86UW7 1296 aa17.46■□□□□ 0.39
COPB1-208ENST00000532088 FMN2Q9NZ56 1722 aa17.45■□□□□ 0.38
COPB1-208ENST00000532088 ATAD2Q6PL18 1390 aa17.43■□□□□ 0.38
COPB1-208ENST00000532088 DISP3Q9P2K9 1392 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms