RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 POTECB2RU33 542 aa8.55□□□□□ -1.04
ATM-217ENST00000531957 BRICD5Q6PL45 260 aa8.55□□□□□ -1.04
ATM-217ENST00000531957 FAM160A2Q8N612 972 aaPredicted RBP8.55□□□□□ -1.04
ATM-217ENST00000531957 PRDM9Q9NQV7 894 aa8.55□□□□□ -1.04
ATM-217ENST00000531957 MINK1Q8N4C8 1332 aaPredicted RBP8.54□□□□□ -1.04
ATM-217ENST00000531957 AXIN1O15169 862 aa8.54□□□□□ -1.04
ATM-217ENST00000531957 MDM2Q00987 491 aaPredicted RBP8.54□□□□□ -1.04
ATM-217ENST00000531957 TTC24A2A3L6 582 aaPredicted RBP8.52□□□□□ -1.05
ATM-217ENST00000531957 SMCPP49901 116 aaPredicted RBP8.52□□□□□ -1.05
ATM-217ENST00000531957 RNF19BQ6ZMZ0 732 aa8.52□□□□□ -1.05
ATM-217ENST00000531957 ZC3H15Q8WU90 426 aaKnown RBP8.52□□□□□ -1.05
ATM-217ENST00000531957 WNT7AO00755 349 aa8.51□□□□□ -1.05
ATM-217ENST00000531957 TREML4Q6UXN2 200 aa8.51□□□□□ -1.05
ATM-217ENST00000531957 KRI1Q8N9T8 703 aaKnown RBP8.51□□□□□ -1.05
ATM-217ENST00000531957 ZMYND10O75800 440 aa8.5□□□□□ -1.05
ATM-217ENST00000531957 CD46P15529 392 aa8.5□□□□□ -1.05
ATM-217ENST00000531957 MMP16P51512 607 aa8.5□□□□□ -1.05
ATM-217ENST00000531957 USP46P62068 366 aa8.5□□□□□ -1.05
ATM-217ENST00000531957 TRIM32Q13049 653 aa8.5□□□□□ -1.05
ATM-217ENST00000531957 REPIN1Q9BWE0 567 aaKnown RBP8.5□□□□□ -1.05
ATM-217ENST00000531957 C11orf95C9JLR9 678 aaPredicted RBP8.48□□□□□ -1.05
ATM-217ENST00000531957 KDM4AO75164 1064 aa8.48□□□□□ -1.05
ATM-217ENST00000531957 BARGINQ6ZT62 677 aa8.48□□□□□ -1.05
ATM-217ENST00000531957 SNIP1Q8TAD8 396 aaKnown RBP8.48□□□□□ -1.05
ATM-217ENST00000531957 SLC24A1O60721 1099 aa8.47□□□□□ -1.05
ATM-217ENST00000531957 DXOO77932 396 aaKnown RBP8.47□□□□□ -1.05
ATM-217ENST00000531957 USB1Q9BQ65 265 aaKnown RBP8.47□□□□□ -1.05
ATM-217ENST00000531957 GMPR2Q9P2T1 348 aaKnown RBP8.47□□□□□ -1.05
ATM-217ENST00000531957 GPCPD1Q9NPB8 672 aa8.46□□□□□ -1.06
ATM-217ENST00000531957 WFS1O76024 890 aa8.44□□□□□ -1.06
ATM-217ENST00000531957 CLCN1P35523 988 aa8.44□□□□□ -1.06
ATM-217ENST00000531957 LCE2AQ5TA79 106 aaPredicted RBP8.44□□□□□ -1.06
ATM-217ENST00000531957 MRGPRX2Q96LB1 330 aa8.44□□□□□ -1.06
ATM-217ENST00000531957 DACH1Q9UI36 760 aa8.44□□□□□ -1.06
ATM-217ENST00000531957 SMPD1P17405 629 aa8.43□□□□□ -1.06
ATM-217ENST00000531957 HLA-CQ95604 372 aa8.43□□□□□ -1.06
ATM-217ENST00000531957 SENP2Q9HC62 589 aa8.43□□□□□ -1.06
ATM-217ENST00000531957 FAM217BQ9NTX9 383 aaPredicted RBP8.43□□□□□ -1.06
ATM-217ENST00000531957 HOXA2O43364 376 aa8.42□□□□□ -1.06
ATM-217ENST00000531957 WNT7BP56706 349 aa8.42□□□□□ -1.06
ATM-217ENST00000531957 TTLL12Q14166 644 aaPredicted RBP8.42□□□□□ -1.06
ATM-217ENST00000531957 ATP13A2Q9NQ11 1180 aa8.42□□□□□ -1.06
ATM-217ENST00000531957 CCDC24Q8N4L8 307 aa8.41□□□□□ -1.06
ATM-217ENST00000531957 KIFC2Q96AC6 838 aa8.41□□□□□ -1.06
ATM-217ENST00000531957 JUNDP17535 347 aa8.39□□□□□ -1.07
ATM-217ENST00000531957 GUCA2AQ02747 115 aa8.39□□□□□ -1.07
ATM-217ENST00000531957 TRIM47Q96LD4 638 aa8.39□□□□□ -1.07
ATM-217ENST00000531957 NFX1Q12986 1120 aaKnown RBP8.38□□□□□ -1.07
ATM-217ENST00000531957 AMHR2Q16671 573 aa8.38□□□□□ -1.07
ATM-217ENST00000531957 J3QL48 77 aa8.37□□□□□ -1.07
ATM-217ENST00000531957 TRIM66O15016 1216 aa8.37□□□□□ -1.07
ATM-217ENST00000531957 WIPF1O43516 503 aa8.37□□□□□ -1.07
ATM-217ENST00000531957 SSTR3P32745 418 aaPredicted RBP8.37□□□□□ -1.07
ATM-217ENST00000531957 INSM1Q01101 510 aaPredicted RBP8.37□□□□□ -1.07
ATM-217ENST00000531957 RC3H1Q5TC82 1133 aaKnown RBP8.37□□□□□ -1.07
ATM-217ENST00000531957 GIGYF2Q6Y7W6 1299 aaKnown RBP8.37□□□□□ -1.07
ATM-217ENST00000531957 STK17AQ9UEE5 414 aa8.37□□□□□ -1.07
ATM-217ENST00000531957 NUTM1Q86Y26 1132 aa8.36□□□□□ -1.07
ATM-217ENST00000531957 SLC24A3Q9HC58 644 aa8.36□□□□□ -1.07
ATM-217ENST00000531957 RETREG3Q86VR2 466 aa8.35□□□□□ -1.07
ATM-217ENST00000531957 PARP9Q8IXQ6 854 aa8.35□□□□□ -1.07
ATM-217ENST00000531957 AK7Q96M32 723 aa8.35□□□□□ -1.07
ATM-217ENST00000531957 NUDT12Q9BQG2 462 aa8.35□□□□□ -1.07
ATM-217ENST00000531957 HPS1Q92902 700 aa8.34□□□□□ -1.07
ATM-217ENST00000531957 BCANQ96GW7 911 aa8.34□□□□□ -1.07
ATM-217ENST00000531957 TERTO14746 1132 aaKnown RBP8.33□□□□□ -1.08
ATM-217ENST00000531957 SNRPBP14678 240 aaKnown RBP8.33□□□□□ -1.08
ATM-217ENST00000531957 SKOR1P84550 965 aa8.33□□□□□ -1.08
ATM-217ENST00000531957 SYMPKQ92797 1274 aaKnown RBP8.33□□□□□ -1.08
ATM-217ENST00000531957 ALDH1A1P00352 501 aa8.32□□□□□ -1.08
ATM-217ENST00000531957 EHBP1Q8NDI1 1231 aa8.32□□□□□ -1.08
ATM-217ENST00000531957 MS4A1P11836 297 aa8.31□□□□□ -1.08
ATM-217ENST00000531957 NDUFV2P19404 249 aa8.31□□□□□ -1.08
ATM-217ENST00000531957 SPIRE2Q8WWL2 714 aa8.31□□□□□ -1.08
ATM-217ENST00000531957 BEGAINQ9BUH8 593 aa8.31□□□□□ -1.08
ATM-217ENST00000531957 CCNYL3P0C7X3 344 aa8.3□□□□□ -1.08
ATM-217ENST00000531957 FDX1P10109 184 aa8.3□□□□□ -1.08
ATM-217ENST00000531957 PDE4DQ08499 809 aa8.3□□□□□ -1.08
ATM-217ENST00000531957 PCDHGC3Q9UN70 934 aa8.3□□□□□ -1.08
ATM-217ENST00000531957 WASF2Q9Y6W5 498 aa8.3□□□□□ -1.08
ATM-217ENST00000531957 SLC16A10Q8TF71 515 aa8.29□□□□□ -1.08
ATM-217ENST00000531957 MOXD2PA6NHM9 499 aa8.28□□□□□ -1.08
ATM-217ENST00000531957 C6orf229H3BNL8 230 aa8.28□□□□□ -1.08
ATM-217ENST00000531957 PTPRNQ16849 979 aa8.28□□□□□ -1.08
ATM-217ENST00000531957 TBC1D2Q9BYX2 928 aa8.26□□□□□ -1.09
ATM-217ENST00000531957 FAM181BA6NEQ2 426 aa8.25□□□□□ -1.09
ATM-217ENST00000531957 CAPN5O15484 640 aaPredicted RBP8.25□□□□□ -1.09
ATM-217ENST00000531957 SIAH2O43255 324 aa8.25□□□□□ -1.09
ATM-217ENST00000531957 NPAS3Q8IXF0 933 aa8.25□□□□□ -1.09
ATM-217ENST00000531957 SPDYE5A6NIY4 337 aa8.24□□□□□ -1.09
ATM-217ENST00000531957 PTCRAQ6ISU1 281 aaPredicted RBP8.24□□□□□ -1.09
ATM-217ENST00000531957 UNC93B1Q9H1C4 597 aa8.24□□□□□ -1.09
ATM-217ENST00000531957 NXF1Q9UBU9 619 aaKnown RBP8.24□□□□□ -1.09
ATM-217ENST00000531957 PLEKHG3A1L390 1219 aa8.23□□□□□ -1.09
ATM-217ENST00000531957 BMP1P13497 986 aa8.23□□□□□ -1.09
ATM-217ENST00000531957 SH3BP2P78314 561 aa8.23□□□□□ -1.09
ATM-217ENST00000531957 DESI1Q6ICB0 168 aa8.23□□□□□ -1.09
ATM-217ENST00000531957 TRIM46Q7Z4K8 759 aa8.22□□□□□ -1.09
ATM-217ENST00000531957 IRF7Q92985 503 aa8.22□□□□□ -1.09
ATM-217ENST00000531957 VARSP26640 1264 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms