RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 NYAP1Q6ZVC0 841 aa6.78□□□□□ -1.32
AC055878.1-201ENST00000531858 RIC3Q7Z5B4 369 aa6.78□□□□□ -1.32
AC055878.1-201ENST00000531858 PXYLP1Q8TE99 480 aa6.78□□□□□ -1.32
AC055878.1-201ENST00000531858 VRTNQ9H8Y1 702 aa6.78□□□□□ -1.32
AC055878.1-201ENST00000531858 RBM27Q9P2N5 1060 aaKnown RBP6.78□□□□□ -1.32
AC055878.1-201ENST00000531858 CDK11AQ9UQ88 783 aaPredicted RBP6.78□□□□□ -1.32
AC055878.1-201ENST00000531858 MAP3K7O43318 606 aa6.77□□□□□ -1.33
AC055878.1-201ENST00000531858 GFRA3O60609 400 aa6.77□□□□□ -1.33
AC055878.1-201ENST00000531858 ATG7O95352 703 aa6.77□□□□□ -1.33
AC055878.1-201ENST00000531858 KCNC4Q03721 635 aa6.77□□□□□ -1.33
AC055878.1-201ENST00000531858 HDGFL1Q5TGJ6 251 aa6.77□□□□□ -1.33
AC055878.1-201ENST00000531858 PPP1R12CQ9BZL4 782 aa6.77□□□□□ -1.33
AC055878.1-201ENST00000531858 NDUFB9Q9Y6M9 179 aa6.77□□□□□ -1.33
AC055878.1-201ENST00000531858 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.76□□□□□ -1.33
AC055878.1-201ENST00000531858 LCE2BO14633 110 aa6.76□□□□□ -1.33
AC055878.1-201ENST00000531858 SOX11P35716 441 aa6.76□□□□□ -1.33
AC055878.1-201ENST00000531858 MYT1Q01538 1121 aa6.76□□□□□ -1.33
AC055878.1-201ENST00000531858 CDHR5Q9HBB8 845 aa6.76□□□□□ -1.33
AC055878.1-201ENST00000531858 IGSF5Q9NSI5 407 aa6.76□□□□□ -1.33
AC055878.1-201ENST00000531858 LIMD1Q9UGP4 676 aa6.76□□□□□ -1.33
AC055878.1-201ENST00000531858 TBC1D2BQ9UPU7 963 aa6.76□□□□□ -1.33
AC055878.1-201ENST00000531858 JPH4Q96JJ6 628 aa6.75□□□□□ -1.33
AC055878.1-201ENST00000531858 USP35Q9P2H5 1018 aa6.75□□□□□ -1.33
AC055878.1-201ENST00000531858 ADGRG1Q9Y653 693 aa6.75□□□□□ -1.33
AC055878.1-201ENST00000531858 LILRB3O75022 631 aa6.74□□□□□ -1.33
AC055878.1-201ENST00000531858 BCAMP50895 628 aa6.74□□□□□ -1.33
AC055878.1-201ENST00000531858 SPIRE2Q8WWL2 714 aa6.74□□□□□ -1.33
AC055878.1-201ENST00000531858 ZDHHC16Q969W1 377 aa6.74□□□□□ -1.33
AC055878.1-201ENST00000531858 CANXP27824 592 aaKnown RBP6.73□□□□□ -1.33
AC055878.1-201ENST00000531858 PRPF38BQ5VTL8 546 aaKnown RBP6.73□□□□□ -1.33
AC055878.1-201ENST00000531858 TYW1BQ6NUM6 668 aa6.73□□□□□ -1.33
AC055878.1-201ENST00000531858 RSBN1LQ6PCB5 846 aaPredicted RBP6.73□□□□□ -1.33
AC055878.1-201ENST00000531858 RABGEF1Q9UJ41 708 aa6.73□□□□□ -1.33
AC055878.1-201ENST00000531858 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.72□□□□□ -1.33
AC055878.1-201ENST00000531858 SOWAHBA6NEL2 793 aa6.72□□□□□ -1.33
AC055878.1-201ENST00000531858 NRG2O14511 850 aaPredicted RBP6.72□□□□□ -1.33
AC055878.1-201ENST00000531858 USP17L8P0C7I0 530 aa6.72□□□□□ -1.33
AC055878.1-201ENST00000531858 RFX1P22670 979 aa6.72□□□□□ -1.33
AC055878.1-201ENST00000531858 FBXO31Q5XUX0 539 aaPredicted RBP6.72□□□□□ -1.33
AC055878.1-201ENST00000531858 SULF1Q8IWU6 871 aa6.72□□□□□ -1.33
AC055878.1-201ENST00000531858 TTC13Q8NBP0 860 aa6.72□□□□□ -1.33
AC055878.1-201ENST00000531858 ADAM33Q9BZ11 813 aa6.72□□□□□ -1.33
AC055878.1-201ENST00000531858 PALM3A6NDB9 673 aaPredicted RBP6.71□□□□□ -1.34
AC055878.1-201ENST00000531858 TMEM88BA6NKF7 163 aa6.71□□□□□ -1.34
AC055878.1-201ENST00000531858 PPP1R3GB7ZBB8 358 aa6.71□□□□□ -1.34
AC055878.1-201ENST00000531858 AP1G2O75843 785 aa6.71□□□□□ -1.34
AC055878.1-201ENST00000531858 LAPTM4BQ86VI4 370 aa6.71□□□□□ -1.34
AC055878.1-201ENST00000531858 RBM46Q8TBY0 533 aaKnown RBP6.71□□□□□ -1.34
AC055878.1-201ENST00000531858 CCER1Q8TC90 406 aaPredicted RBP6.71□□□□□ -1.34
AC055878.1-201ENST00000531858 ADAMTS19Q8TE59 1207 aa6.71□□□□□ -1.34
AC055878.1-201ENST00000531858 CD46P15529 392 aa6.7□□□□□ -1.34
AC055878.1-201ENST00000531858 NUTM1Q86Y26 1132 aa6.7□□□□□ -1.34
AC055878.1-201ENST00000531858 ALG2Q9H553 416 aa6.7□□□□□ -1.34
AC055878.1-201ENST00000531858 ELOAQ14241 798 aaKnown RBP6.69□□□□□ -1.34
AC055878.1-201ENST00000531858 ZNF787Q6DD87 383 aa6.69□□□□□ -1.34
AC055878.1-201ENST00000531858 GJD4Q96KN9 370 aaPredicted RBP6.69□□□□□ -1.34
AC055878.1-201ENST00000531858 WBP1LQ9NX94 342 aa6.69□□□□□ -1.34
AC055878.1-201ENST00000531858 PCDHGA10Q9Y5H3 936 aa6.69□□□□□ -1.34
AC055878.1-201ENST00000531858 UNCXA6NJT0 531 aa6.68□□□□□ -1.34
AC055878.1-201ENST00000531858 LMOD1P29536 600 aaPredicted RBP6.68□□□□□ -1.34
AC055878.1-201ENST00000531858 SIRT1Q96EB6 747 aa6.68□□□□□ -1.34
AC055878.1-201ENST00000531858 TSR1Q2NL82 804 aaKnown RBP6.67□□□□□ -1.34
AC055878.1-201ENST00000531858 PROX2Q3B8N5 592 aa6.67□□□□□ -1.34
AC055878.1-201ENST00000531858 PADI6Q6TGC4 694 aa6.67□□□□□ -1.34
AC055878.1-201ENST00000531858 ZFRQ96KR1 1074 aaKnown RBP6.67□□□□□ -1.34
AC055878.1-201ENST00000531858 NUTM2BA6NNL0 878 aaPredicted RBP6.66□□□□□ -1.34
AC055878.1-201ENST00000531858 NUTM2EB1AL46 878 aaPredicted RBP6.66□□□□□ -1.34
AC055878.1-201ENST00000531858 NUTM2DQ5VT03 806 aaPredicted RBP6.66□□□□□ -1.34
AC055878.1-201ENST00000531858 TXNDC2Q86VQ3 553 aa6.66□□□□□ -1.34
AC055878.1-201ENST00000531858 NUTM2AQ8IVF1 878 aaPredicted RBP6.66□□□□□ -1.34
AC055878.1-201ENST00000531858 RBM33Q96EV2 1170 aaKnown RBP6.66□□□□□ -1.34
AC055878.1-201ENST00000531858 PRKD2Q9BZL6 878 aa6.66□□□□□ -1.34
AC055878.1-201ENST00000531858 ZBTB3Q9H5J0 574 aa6.66□□□□□ -1.34
AC055878.1-201ENST00000531858 TFIP11Q9UBB9 837 aaKnown RBP6.66□□□□□ -1.34
AC055878.1-201ENST00000531858 MOXD2PA6NHM9 499 aa6.65□□□□□ -1.34
AC055878.1-201ENST00000531858 USP46P62068 366 aa6.65□□□□□ -1.34
AC055878.1-201ENST00000531858 QPCTQ16769 361 aa6.65□□□□□ -1.34
AC055878.1-201ENST00000531858 NLRP7Q8WX94 980 aa6.65□□□□□ -1.34
AC055878.1-201ENST00000531858 MAFBQ9Y5Q3 323 aaPredicted RBP6.65□□□□□ -1.34
AC055878.1-201ENST00000531858 TTBK1Q5TCY1 1321 aaPredicted RBP6.65□□□□□ -1.35
AC055878.1-201ENST00000531858 FAM161AQ3B820 660 aa6.64□□□□□ -1.35
AC055878.1-201ENST00000531858 RTL5Q5HYW3 569 aaPredicted RBP6.64□□□□□ -1.35
AC055878.1-201ENST00000531858 CCDC125Q86Z20 511 aa6.64□□□□□ -1.35
AC055878.1-201ENST00000531858 ZNF775Q96BV0 537 aaPredicted RBP6.64□□□□□ -1.35
AC055878.1-201ENST00000531858 C8orf37Q96NL8 207 aa6.64□□□□□ -1.35
AC055878.1-201ENST00000531858 ARID4AP29374 1257 aaPredicted RBP6.63□□□□□ -1.35
AC055878.1-201ENST00000531858 C6orf132Q5T0Z8 1188 aa6.63□□□□□ -1.35
AC055878.1-201ENST00000531858 DNAJC14Q6Y2X3 702 aaPredicted RBP6.63□□□□□ -1.35
AC055878.1-201ENST00000531858 FAM177A1Q8N128 213 aaPredicted RBP6.63□□□□□ -1.35
AC055878.1-201ENST00000531858 PNMA1Q8ND90 353 aa6.63□□□□□ -1.35
AC055878.1-201ENST00000531858 MRRFQ96E11 262 aaKnown RBP6.63□□□□□ -1.35
AC055878.1-201ENST00000531858 KIAA1468Q9P260 1216 aa6.63□□□□□ -1.35
AC055878.1-201ENST00000531858 TSR3Q9UJK0 312 aaKnown RBP6.63□□□□□ -1.35
AC055878.1-201ENST00000531858 GPR37L1O60883 481 aa6.62□□□□□ -1.35
AC055878.1-201ENST00000531858 COL9A1P20849 921 aa6.62□□□□□ -1.35
AC055878.1-201ENST00000531858 VAMP1P23763 118 aa6.62□□□□□ -1.35
AC055878.1-201ENST00000531858 PRSS12P56730 875 aa6.62□□□□□ -1.35
AC055878.1-201ENST00000531858 VAC14Q08AM6 782 aa6.62□□□□□ -1.35
AC055878.1-201ENST00000531858 CSPP1Q1MSJ5 1256 aa6.62□□□□□ -1.35
AC055878.1-201ENST00000531858 HELBQ8NG08 1087 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms