RNA–Protein interactions for RNA: ENST00000530923.5

SDHD-207, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-207ENST00000530923 SPATA31A6Q5VVP1 1343 aa11.36□□□□□ -0.59
SDHD-207ENST00000530923 NEXMIFQ5QGS0 1516 aa11.36□□□□□ -0.59
SDHD-207ENST00000530923 TRIM52Q96A61 297 aa11.36□□□□□ -0.59
SDHD-207ENST00000530923 NAIPQ13075 1403 aa11.35□□□□□ -0.59
SDHD-207ENST00000530923 ASXL1Q8IXJ9 1541 aa11.35□□□□□ -0.59
SDHD-207ENST00000530923 MEX3CQ5U5Q3 659 aaKnown RBP11.35□□□□□ -0.59
SDHD-207ENST00000530923 SRCAPQ6ZRS2 3230 aa11.34□□□□□ -0.59
SDHD-207ENST00000530923 NALCNQ8IZF0 1738 aa11.34□□□□□ -0.59
SDHD-207ENST00000530923 NHSL1Q5SYE7 1610 aa11.34□□□□□ -0.59
SDHD-207ENST00000530923 DCCP43146 1447 aa11.34□□□□□ -0.59
SDHD-207ENST00000530923 RRBP1Q9P2E9 1410 aaKnown RBP11.34□□□□□ -0.59
SDHD-207ENST00000530923 UPF1Q92900 1129 aaKnown RBP eCLIP11.33□□□□□ -0.6
SDHD-207ENST00000530923 SETD5Q9C0A6 1442 aa11.33□□□□□ -0.6
SDHD-207ENST00000530923 ROBO2Q9HCK4 1378 aa11.32□□□□□ -0.6
SDHD-207ENST00000530923 MKRN4PQ13434 485 aaPredicted RBP11.32□□□□□ -0.6
SDHD-207ENST00000530923 ZNF772Q68DY9 489 aaPredicted RBP11.32□□□□□ -0.6
SDHD-207ENST00000530923 ADGRL3Q9HAR2 1447 aa11.32□□□□□ -0.6
SDHD-207ENST00000530923 KIF1BO60333 1816 aa11.32□□□□□ -0.6
SDHD-207ENST00000530923 AFF2P51816 1311 aa11.32□□□□□ -0.6
SDHD-207ENST00000530923 PNPLA6Q8IY17 1366 aa11.3□□□□□ -0.6
SDHD-207ENST00000530923 RXRBP28702 533 aa11.3□□□□□ -0.6
SDHD-207ENST00000530923 ORAI2Q96SN7 254 aa11.3□□□□□ -0.6
SDHD-207ENST00000530923 LRRC59Q96AG4 307 aaKnown RBP11.29□□□□□ -0.6
SDHD-207ENST00000530923 C1orf167Q5SNV9 1468 aa11.29□□□□□ -0.6
SDHD-207ENST00000530923 C8orf37Q96NL8 207 aa11.28□□□□□ -0.6
SDHD-207ENST00000530923 ADAMTS2O95450 1211 aa11.27□□□□□ -0.61
SDHD-207ENST00000530923 HFM1A2PYH4 1435 aa11.26□□□□□ -0.61
SDHD-207ENST00000530923 PPLO60437 1756 aa11.26□□□□□ -0.61
SDHD-207ENST00000530923 VGFO15240 615 aaPredicted RBP11.26□□□□□ -0.61
SDHD-207ENST00000530923 QTRT2Q9H974 415 aaKnown RBP11.26□□□□□ -0.61
SDHD-207ENST00000530923 EP400Q96L91 3159 aa11.26□□□□□ -0.61
SDHD-207ENST00000530923 PTCH1Q13635 1447 aa11.26□□□□□ -0.61
SDHD-207ENST00000530923 LAMC1P11047 1609 aa11.25□□□□□ -0.61
SDHD-207ENST00000530923 SOS2Q07890 1332 aaPredicted RBP11.25□□□□□ -0.61
SDHD-207ENST00000530923 ADGRF5Q8IZF2 1346 aa11.25□□□□□ -0.61
SDHD-207ENST00000530923 RGS12O14924 1447 aa11.25□□□□□ -0.61
SDHD-207ENST00000530923 CDK12Q9NYV4 1490 aaPredicted RBP11.24□□□□□ -0.61
SDHD-207ENST00000530923 WAPLQ7Z5K2 1190 aa11.23□□□□□ -0.61
SDHD-207ENST00000530923 NGLY1Q96IV0 654 aa11.23□□□□□ -0.61
SDHD-207ENST00000530923 RPGRIP1LQ68CZ1 1315 aa11.23□□□□□ -0.61
SDHD-207ENST00000530923 PRAG1Q86YV5 1406 aa11.23□□□□□ -0.61
SDHD-207ENST00000530923 RBM6P78332 1123 aaKnown RBP11.22□□□□□ -0.61
SDHD-207ENST00000530923 XPCQ01831 940 aaPredicted RBP11.22□□□□□ -0.61
SDHD-207ENST00000530923 RGL3Q3MIN7 710 aa11.22□□□□□ -0.61
SDHD-207ENST00000530923 TMEM132EQ6IEE7 984 aa11.22□□□□□ -0.61
SDHD-207ENST00000530923 STK26Q9P289 416 aa11.22□□□□□ -0.61
SDHD-207ENST00000530923 SPATA31E1Q6ZUB1 1445 aa11.21□□□□□ -0.61
SDHD-207ENST00000530923 PLEKHH1Q9ULM0 1364 aa11.21□□□□□ -0.61
SDHD-207ENST00000530923 NUTM2FA1L443 756 aa11.21□□□□□ -0.61
SDHD-207ENST00000530923 ZNF692Q9BU19 519 aaPredicted RBP11.21□□□□□ -0.61
SDHD-207ENST00000530923 ESCO1Q5FWF5 840 aa11.2□□□□□ -0.62
SDHD-207ENST00000530923 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
SDHD-207ENST00000530923 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
SDHD-207ENST00000530923 PXDNQ92626 1479 aa11.19□□□□□ -0.62
SDHD-207ENST00000530923 FOXO3O43524 673 aa11.19□□□□□ -0.62
SDHD-207ENST00000530923 FNBP4Q8N3X1 1017 aaPredicted RBP11.19□□□□□ -0.62
SDHD-207ENST00000530923 MPHOSPH9Q99550 1183 aa11.19□□□□□ -0.62
SDHD-207ENST00000530923 USP21Q9UK80 565 aa11.19□□□□□ -0.62
SDHD-207ENST00000530923 IFT172Q9UG01 1749 aa11.18□□□□□ -0.62
SDHD-207ENST00000530923 COL22A1Q8NFW1 1626 aaPredicted RBP11.18□□□□□ -0.62
SDHD-207ENST00000530923 MYOM2P54296 1465 aa11.18□□□□□ -0.62
SDHD-207ENST00000530923 CDC42BPGQ6DT37 1551 aa11.17□□□□□ -0.62
SDHD-207ENST00000530923 BCL9LQ86UU0 1499 aa11.17□□□□□ -0.62
SDHD-207ENST00000530923 ATRNO75882 1429 aa11.17□□□□□ -0.62
SDHD-207ENST00000530923 LRPPRCP42704 1394 aaKnown RBP11.16□□□□□ -0.62
SDHD-207ENST00000530923 CCDC144AA2RUR9 1427 aa11.16□□□□□ -0.62
SDHD-207ENST00000530923 TECPR2O15040 1411 aa11.16□□□□□ -0.62
SDHD-207ENST00000530923 RGPD8O14715 1765 aaPredicted RBP11.16□□□□□ -0.62
SDHD-207ENST00000530923 ABCC11Q96J66 1382 aa11.16□□□□□ -0.62
SDHD-207ENST00000530923 NPHP3Q7Z494 1330 aa11.15□□□□□ -0.62
SDHD-207ENST00000530923 TRPC5Q9UL62 973 aaPredicted RBP11.15□□□□□ -0.62
SDHD-207ENST00000530923 PIK3C2GO75747 1445 aa11.15□□□□□ -0.62
SDHD-207ENST00000530923 MARF1Q9Y4F3 1742 aaKnown RBP11.14□□□□□ -0.63
SDHD-207ENST00000530923 ANKRD30BQ9BXX2 1392 aa11.14□□□□□ -0.63
SDHD-207ENST00000530923 FMN2Q9NZ56 1722 aa11.13□□□□□ -0.63
SDHD-207ENST00000530923 YTHDC2Q9H6S0 1430 aaKnown RBP11.13□□□□□ -0.63
SDHD-207ENST00000530923 CFAP70Q5T0N1 1121 aa11.13□□□□□ -0.63
SDHD-207ENST00000530923 KNDC1Q76NI1 1749 aa11.12□□□□□ -0.63
SDHD-207ENST00000530923 CABLES1Q8TDN4 633 aa11.12□□□□□ -0.63
SDHD-207ENST00000530923 C14orf93Q9H972 538 aaKnown RBP11.12□□□□□ -0.63
SDHD-207ENST00000530923 SPATA31A3Q5VYP0 1347 aa11.11□□□□□ -0.63
SDHD-207ENST00000530923 PLEKHG5O94827 1062 aa11.11□□□□□ -0.63
SDHD-207ENST00000530923 SAFB2Q14151 953 aaKnown RBP eCLIP11.11□□□□□ -0.63
SDHD-207ENST00000530923 KRT28Q7Z3Y7 464 aa11.11□□□□□ -0.63
SDHD-207ENST00000530923 ATAD2Q6PL18 1390 aa11.11□□□□□ -0.63
SDHD-207ENST00000530923 GJD4Q96KN9 370 aaPredicted RBP11.1□□□□□ -0.63
SDHD-207ENST00000530923 NRXN1Q9ULB1 1477 aa11.1□□□□□ -0.63
SDHD-207ENST00000530923 GLI3P10071 1580 aa11.09□□□□□ -0.63
SDHD-207ENST00000530923 SPDYE1Q8NFV5 336 aaPredicted RBP11.09□□□□□ -0.63
SDHD-207ENST00000530923 SIRT1Q96EB6 747 aa11.09□□□□□ -0.63
SDHD-207ENST00000530923 PRAM1Q96QH2 718 aa11.09□□□□□ -0.63
SDHD-207ENST00000530923 BRWD3Q6RI45 1802 aa11.09□□□□□ -0.63
SDHD-207ENST00000530923 SLIT2O94813 1529 aa11.09□□□□□ -0.63
SDHD-207ENST00000530923 RALGAPBQ86X10 1494 aa11.08□□□□□ -0.64
SDHD-207ENST00000530923 UNC5CLQ8IV45 518 aa11.08□□□□□ -0.64
SDHD-207ENST00000530923 PHF8Q9UPP1 1060 aa11.08□□□□□ -0.64
SDHD-207ENST00000530923 USP32Q8NFA0 1604 aa11.07□□□□□ -0.64
SDHD-207ENST00000530923 PMFBP1Q8TBY8 1022 aa11.07□□□□□ -0.64
SDHD-207ENST00000530923 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.06□□□□□ -0.64
SDHD-207ENST00000530923 KIF1AQ12756 1690 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms