RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 PLEKHH1Q9ULM0 1364 aa22.79■■□□□ 1.24
BRK1-201ENST00000530758 PRAM1Q96QH2 718 aa22.79■■□□□ 1.24
BRK1-201ENST00000530758 DISP3Q9P2K9 1392 aa22.78■■□□□ 1.24
BRK1-201ENST00000530758 NALCNQ8IZF0 1738 aa22.78■■□□□ 1.24
BRK1-201ENST00000530758 ADGRL3Q9HAR2 1447 aa22.78■■□□□ 1.24
BRK1-201ENST00000530758 DCCP43146 1447 aa22.76■■□□□ 1.23
BRK1-201ENST00000530758 POGKQ9P215 609 aa22.76■■□□□ 1.23
BRK1-201ENST00000530758 ROBO1Q9Y6N7 1651 aa22.76■■□□□ 1.23
BRK1-201ENST00000530758 MSH6P52701 1360 aa22.76■■□□□ 1.23
BRK1-201ENST00000530758 EIF3AQ14152 1382 aaKnown RBP22.73■■□□□ 1.23
BRK1-201ENST00000530758 ADGRB2O60241 1585 aa22.72■■□□□ 1.23
BRK1-201ENST00000530758 MED1Q15648 1581 aaPredicted RBP22.72■■□□□ 1.23
BRK1-201ENST00000530758 CENPJQ9HC77 1338 aaPredicted RBP22.72■■□□□ 1.23
BRK1-201ENST00000530758 CDC42BPGQ6DT37 1551 aa22.72■■□□□ 1.23
BRK1-201ENST00000530758 ILDR2Q71H61 639 aa22.71■■□□□ 1.23
BRK1-201ENST00000530758 C14orf37Q86TY3 774 aa22.71■■□□□ 1.23
BRK1-201ENST00000530758 CADPS2Q86UW7 1296 aa22.71■■□□□ 1.23
BRK1-201ENST00000530758 ZEB1P37275 1124 aaPredicted RBP22.7■■□□□ 1.22
BRK1-201ENST00000530758 QRICH2Q9H0J4 1663 aa22.69■■□□□ 1.22
BRK1-201ENST00000530758 SBNO2Q9Y2G9 1366 aa22.69■■□□□ 1.22
BRK1-201ENST00000530758 ATF3P18847 181 aa22.68■■□□□ 1.22
BRK1-201ENST00000530758 SAFB2Q14151 953 aaKnown RBP eCLIP22.67■■□□□ 1.22
BRK1-201ENST00000530758 USP47Q96K76 1375 aa22.66■■□□□ 1.22
BRK1-201ENST00000530758 SLAIN2Q9P270 581 aa22.66■■□□□ 1.22
BRK1-201ENST00000530758 FMN2Q9NZ56 1722 aa22.65■■□□□ 1.22
BRK1-201ENST00000530758 MINK1Q8N4C8 1332 aaPredicted RBP22.64■■□□□ 1.22
BRK1-201ENST00000530758 ST20-MTHFSA0A0A6YYL1 179 aa22.64■■□□□ 1.21
BRK1-201ENST00000530758 WASLO00401 505 aaPredicted RBP22.64■■□□□ 1.21
BRK1-201ENST00000530758 SLC24A1O60721 1099 aa22.64■■□□□ 1.21
BRK1-201ENST00000530758 MST1RQ04912 1400 aa22.64■■□□□ 1.21
BRK1-201ENST00000530758 TESK2Q96S53 571 aa22.63■■□□□ 1.21
BRK1-201ENST00000530758 PHLPP1O60346 1717 aa22.6■■□□□ 1.21
BRK1-201ENST00000530758 EIF4G2P78344 907 aaKnown RBP eCLIP22.6■■□□□ 1.21
BRK1-201ENST00000530758 HIRIP3Q9BW71 556 aaPredicted RBP22.6■■□□□ 1.21
BRK1-201ENST00000530758 COL16A1Q07092 1604 aaPredicted RBP22.59■■□□□ 1.21
BRK1-201ENST00000530758 C1orf167Q5SNV9 1468 aa22.59■■□□□ 1.21
BRK1-201ENST00000530758 ANKARQ7Z5J8 1434 aa22.58■■□□□ 1.21
BRK1-201ENST00000530758 TULP4Q9NRJ4 1543 aa22.58■■□□□ 1.21
BRK1-201ENST00000530758 CDK19Q9BWU1 502 aa22.58■■□□□ 1.21
BRK1-201ENST00000530758 RGPD8O14715 1765 aaPredicted RBP22.58■■□□□ 1.2
BRK1-201ENST00000530758 EVC2Q86UK5 1308 aa22.57■■□□□ 1.2
BRK1-201ENST00000530758 USP32Q8NFA0 1604 aa22.57■■□□□ 1.2
BRK1-201ENST00000530758 PUS7Q96PZ0 661 aaKnown RBP22.57■■□□□ 1.2
BRK1-201ENST00000530758 AHDC1Q5TGY3 1603 aaPredicted RBP22.56■■□□□ 1.2
BRK1-201ENST00000530758 HSPA5P11021 654 aaKnown RBP22.55■■□□□ 1.2
BRK1-201ENST00000530758 PRR36Q9H6K5 1346 aa22.53■■□□□ 1.2
BRK1-201ENST00000530758 BRINP3Q76B58 766 aa22.52■■□□□ 1.2
BRK1-201ENST00000530758 NUDT16Q96DE0 195 aaKnown RBP22.52■■□□□ 1.2
BRK1-201ENST00000530758 ATP7BP35670 1465 aa22.52■■□□□ 1.2
BRK1-201ENST00000530758 ITSN1Q15811 1721 aa22.51■■□□□ 1.19
BRK1-201ENST00000530758 TOPAZ1Q8N9V7 1692 aa22.5■■□□□ 1.19
BRK1-201ENST00000530758 ORAI2Q96SN7 254 aa22.5■■□□□ 1.19
BRK1-201ENST00000530758 CCDC61Q9Y6R9 512 aa22.5■■□□□ 1.19
BRK1-201ENST00000530758 NHSL1Q5SYE7 1610 aa22.49■■□□□ 1.19
BRK1-201ENST00000530758 NUTM2FA1L443 756 aa22.49■■□□□ 1.19
BRK1-201ENST00000530758 TMF1P82094 1093 aa22.49■■□□□ 1.19
BRK1-201ENST00000530758 CABP2Q9NPB3 220 aa22.49■■□□□ 1.19
BRK1-201ENST00000530758 SRPK2P78362 688 aaKnown RBP22.48■■□□□ 1.19
BRK1-201ENST00000530758 ESCO1Q5FWF5 840 aa22.48■■□□□ 1.19
BRK1-201ENST00000530758 KIF1AQ12756 1690 aa22.48■■□□□ 1.19
BRK1-201ENST00000530758 PLEKHG3A1L390 1219 aa22.46■■□□□ 1.19
BRK1-201ENST00000530758 RGS17Q9UGC6 210 aaPredicted RBP22.46■■□□□ 1.19
BRK1-201ENST00000530758 PHF8Q9UPP1 1060 aa22.46■■□□□ 1.19
BRK1-201ENST00000530758 ATAD2Q6PL18 1390 aa22.46■■□□□ 1.19
BRK1-201ENST00000530758 CDCA8Q53HL2 280 aa22.45■■□□□ 1.18
BRK1-201ENST00000530758 SHPRHQ149N8 1683 aa22.44■■□□□ 1.18
BRK1-201ENST00000530758 JCADQ9P266 1359 aa22.44■■□□□ 1.18
BRK1-201ENST00000530758 LRP6O75581 1613 aa22.42■■□□□ 1.18
BRK1-201ENST00000530758 POLR3AO14802 1390 aaPredicted RBP22.41■■□□□ 1.18
BRK1-201ENST00000530758 SOCS7O14512 581 aa22.41■■□□□ 1.18
BRK1-201ENST00000530758 PPIP5K1Q6PFW1 1433 aa22.4■■□□□ 1.18
BRK1-201ENST00000530758 SOS2Q07890 1332 aaPredicted RBP22.4■■□□□ 1.18
BRK1-201ENST00000530758 DDX17Q92841 729 aaKnown RBP22.4■■□□□ 1.18
BRK1-201ENST00000530758 PHF23Q9BUL5 403 aaPredicted RBP22.4■■□□□ 1.18
BRK1-201ENST00000530758 NPHP3Q7Z494 1330 aa22.39■■□□□ 1.18
BRK1-201ENST00000530758 CABP1Q9NZU7 370 aa22.39■■□□□ 1.17
BRK1-201ENST00000530758 NINLQ9Y2I6 1382 aa22.38■■□□□ 1.17
BRK1-201ENST00000530758 C11orf95C9JLR9 678 aaPredicted RBP22.38■■□□□ 1.17
BRK1-201ENST00000530758 FOXO3O43524 673 aa22.38■■□□□ 1.17
BRK1-201ENST00000530758 PMFBP1Q8TBY8 1022 aa22.38■■□□□ 1.17
BRK1-201ENST00000530758 ACEP12821 1306 aa22.36■■□□□ 1.17
BRK1-201ENST00000530758 PXDNQ92626 1479 aa22.36■■□□□ 1.17
BRK1-201ENST00000530758 AKAP12Q02952 1782 aa22.35■■□□□ 1.17
BRK1-201ENST00000530758 CPSF1Q10570 1443 aaKnown RBP22.35■■□□□ 1.17
BRK1-201ENST00000530758 ZNF692Q9BU19 519 aaPredicted RBP22.35■■□□□ 1.17
BRK1-201ENST00000530758 NGDNQ8NEJ9 315 aaKnown RBP22.34■■□□□ 1.17
BRK1-201ENST00000530758 PSME1Q06323 249 aa22.33■■□□□ 1.17
BRK1-201ENST00000530758 KRT28Q7Z3Y7 464 aa22.33■■□□□ 1.17
BRK1-201ENST00000530758 SLC12A5Q9H2X9 1139 aa22.33■■□□□ 1.17
BRK1-201ENST00000530758 BRD4O60885 1362 aaPredicted RBP22.33■■□□□ 1.17
BRK1-201ENST00000530758 CD163L1Q9NR16 1453 aa22.33■■□□□ 1.16
BRK1-201ENST00000530758 MYOM1P52179 1685 aa22.33■■□□□ 1.16
BRK1-201ENST00000530758 SPATA31A6Q5VVP1 1343 aa22.32■■□□□ 1.16
BRK1-201ENST00000530758 TRPM3Q9HCF6 1732 aaPredicted RBP22.32■■□□□ 1.16
BRK1-201ENST00000530758 SBNO1A3KN83 1393 aa22.31■■□□□ 1.16
BRK1-201ENST00000530758 LRRC59Q96AG4 307 aaKnown RBP22.31■■□□□ 1.16
BRK1-201ENST00000530758 POTEAQ6S8J7 498 aa22.3■■□□□ 1.16
BRK1-201ENST00000530758 KIF7Q2M1P5 1343 aa22.3■■□□□ 1.16
BRK1-201ENST00000530758 MON2Q7Z3U7 1717 aa22.29■■□□□ 1.16
BRK1-201ENST00000530758 PNPLA6Q8IY17 1366 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms