RNA–Protein interactions for RNA: ENST00000530658.1

LGR4-206, Transcript of leucine rich repeat containing G protein-coupled receptor 4, human

TSL 4

Gene LGR4, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR4-206	ENST00000530658	ATP6V1A	P38606	617 aa		7.59	□□□□□ -1.19
LGR4-206	ENST00000530658	APLP1	P51693	650 aa		7.59	□□□□□ -1.19
LGR4-206	ENST00000530658	PRPF38B	Q5VTL8	546 aa	Known RBP	7.59	□□□□□ -1.19
LGR4-206	ENST00000530658	CABLES1	Q8TDN4	633 aa		7.59	□□□□□ -1.19
LGR4-206	ENST00000530658	HRC	P23327	699 aa		7.58	□□□□□ -1.2
LGR4-206	ENST00000530658	GRIPAP1	Q4V328	841 aa		7.58	□□□□□ -1.2
LGR4-206	ENST00000530658	RTL5	Q5HYW3	569 aa	Predicted RBP	7.58	□□□□□ -1.2
LGR4-206	ENST00000530658	TJAP1	Q5JTD0	557 aa		7.58	□□□□□ -1.2
LGR4-206	ENST00000530658	ZBTB3	Q9H5J0	574 aa		7.58	□□□□□ -1.2
LGR4-206	ENST00000530658	NUTM2B	A6NNL0	878 aa	Predicted RBP	7.56	□□□□□ -1.2
LGR4-206	ENST00000530658	NUTM2E	B1AL46	878 aa	Predicted RBP	7.56	□□□□□ -1.2
LGR4-206	ENST00000530658	RGS20	O76081	388 aa		7.56	□□□□□ -1.2
LGR4-206	ENST00000530658	PUS10	Q3MIT2	529 aa	Known RBP	7.56	□□□□□ -1.2
LGR4-206	ENST00000530658	TMEM259	Q4ZIN3	620 aa		7.56	□□□□□ -1.2
LGR4-206	ENST00000530658	MORN1	Q5T089	497 aa		7.56	□□□□□ -1.2
LGR4-206	ENST00000530658	NUTM2D	Q5VT03	806 aa	Predicted RBP	7.56	□□□□□ -1.2
LGR4-206	ENST00000530658	NUTM2A	Q8IVF1	878 aa	Predicted RBP	7.56	□□□□□ -1.2
LGR4-206	ENST00000530658	BANK1	Q8NDB2	785 aa		7.56	□□□□□ -1.2
LGR4-206	ENST00000530658	MTR	Q99707	1265 aa		7.56	□□□□□ -1.2
LGR4-206	ENST00000530658	ZMYND15	Q9H091	742 aa		7.56	□□□□□ -1.2
LGR4-206	ENST00000530658	IL21	Q9HBE4	155 aa		7.56	□□□□□ -1.2
LGR4-206	ENST00000530658	SPDYE5	A6NIY4	337 aa		7.55	□□□□□ -1.2
LGR4-206	ENST00000530658	MTMR2	Q13614	643 aa		7.55	□□□□□ -1.2
LGR4-206	ENST00000530658	SNRK	Q9NRH2	765 aa		7.54	□□□□□ -1.2
LGR4-206	ENST00000530658	SLC27A5	Q9Y2P5	690 aa		7.54	□□□□□ -1.2
LGR4-206	ENST00000530658	C6orf229	H3BNL8	230 aa		7.53	□□□□□ -1.2
LGR4-206	ENST00000530658	UBTF	P17480	764 aa	Known RBP	7.53	□□□□□ -1.2
LGR4-206	ENST00000530658	SYMPK	Q92797	1274 aa	Known RBP	7.53	□□□□□ -1.2
LGR4-206	ENST00000530658	AP1G2	O75843	785 aa		7.52	□□□□□ -1.21
LGR4-206	ENST00000530658	MTMR14	Q8NCE2	650 aa		7.52	□□□□□ -1.21
LGR4-206	ENST00000530658	CLUAP1	Q96AJ1	413 aa		7.52	□□□□□ -1.21
LGR4-206	ENST00000530658	PCDHB3	Q9Y5E6	796 aa		7.52	□□□□□ -1.21
LGR4-206	ENST00000530658	CFAP99	D6REC4	459 aa		7.51	□□□□□ -1.21
LGR4-206	ENST00000530658	USP17L8	P0C7I0	530 aa		7.51	□□□□□ -1.21
LGR4-206	ENST00000530658	SOCS7	O14512	581 aa		7.5	□□□□□ -1.21
LGR4-206	ENST00000530658		Q3C1V9	767 aa		7.5	□□□□□ -1.21
LGR4-206	ENST00000530658	BLOC1S3	Q6QNY0	202 aa		7.5	□□□□□ -1.21
LGR4-206	ENST00000530658	RNF19B	Q6ZMZ0	732 aa		7.5	□□□□□ -1.21
LGR4-206	ENST00000530658	ZNF516	Q92618	1163 aa		7.5	□□□□□ -1.21
LGR4-206	ENST00000530658		A6NJR5	290 aa		7.49	□□□□□ -1.21
LGR4-206	ENST00000530658	SUPT5H	O00267	1087 aa	Known RBP	7.49	□□□□□ -1.21
LGR4-206	ENST00000530658	COPS2	P61201	443 aa		7.49	□□□□□ -1.21
LGR4-206	ENST00000530658	RETREG3	Q86VR2	466 aa		7.49	□□□□□ -1.21
LGR4-206	ENST00000530658	HELB	Q8NG08	1087 aa	Predicted RBP	7.49	□□□□□ -1.21
LGR4-206	ENST00000530658	POM121	Q96HA1	1249 aa		7.49	□□□□□ -1.21
LGR4-206	ENST00000530658	ZPR1	O75312	459 aa		7.48	□□□□□ -1.21
LGR4-206	ENST00000530658	NR1I2	O75469	434 aa		7.48	□□□□□ -1.21
LGR4-206	ENST00000530658	CTDSPL2	Q05D32	466 aa		7.48	□□□□□ -1.21
LGR4-206	ENST00000530658	SCUBE3	Q8IX30	993 aa		7.48	□□□□□ -1.21
LGR4-206	ENST00000530658	PRR7	Q8TB68	274 aa		7.48	□□□□□ -1.21
LGR4-206	ENST00000530658	TSC1	Q92574	1164 aa		7.48	□□□□□ -1.21
LGR4-206	ENST00000530658	THAP11	Q96EK4	314 aa		7.48	□□□□□ -1.21
LGR4-206	ENST00000530658	COG6	Q9Y2V7	657 aa		7.48	□□□□□ -1.21
LGR4-206	ENST00000530658	SALL2	Q9Y467	1007 aa	Predicted RBP	7.48	□□□□□ -1.21
LGR4-206	ENST00000530658	BRICD5	Q6PL45	260 aa		7.47	□□□□□ -1.21
LGR4-206	ENST00000530658	GJD4	Q96KN9	370 aa	Predicted RBP	7.46	□□□□□ -1.22
LGR4-206	ENST00000530658	USB1	Q9BQ65	265 aa	Known RBP	7.46	□□□□□ -1.22
LGR4-206	ENST00000530658	HMX1	Q9NP08	348 aa	Predicted RBP	7.46	□□□□□ -1.22
LGR4-206	ENST00000530658	RAD21	O60216	631 aa		7.45	□□□□□ -1.22
LGR4-206	ENST00000530658	FMNL1	O95466	1100 aa	Predicted RBP	7.45	□□□□□ -1.22
LGR4-206	ENST00000530658	DESI1	Q6ICB0	168 aa		7.45	□□□□□ -1.22
LGR4-206	ENST00000530658	PROSER2	Q86WR7	435 aa	Predicted RBP	7.45	□□□□□ -1.22
LGR4-206	ENST00000530658	LRRN4	Q8WUT4	740 aa		7.45	□□□□□ -1.22
LGR4-206	ENST00000530658	APBB1	O00213	710 aa		7.44	□□□□□ -1.22
LGR4-206	ENST00000530658	PER1	O15534	1290 aa	Predicted RBP	7.44	□□□□□ -1.22
LGR4-206	ENST00000530658	TRAK2	O60296	914 aa		7.44	□□□□□ -1.22
LGR4-206	ENST00000530658	FNBP4	Q8N3X1	1017 aa	Predicted RBP	7.44	□□□□□ -1.22
LGR4-206	ENST00000530658	NKX2-3	Q8TAU0	364 aa		7.44	□□□□□ -1.22
LGR4-206	ENST00000530658	PPP1R18	Q6NYC8	613 aa		7.43	□□□□□ -1.22
LGR4-206	ENST00000530658	TRIM34	Q9BYJ4	488 aa		7.43	□□□□□ -1.22
LGR4-206	ENST00000530658	GDPD2	Q9HCC8	539 aa		7.43	□□□□□ -1.22
LGR4-206	ENST00000530658	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	7.43	□□□□□ -1.22
LGR4-206	ENST00000530658	TBC1D2B	Q9UPU7	963 aa		7.43	□□□□□ -1.22
LGR4-206	ENST00000530658	TLL1	O43897	1013 aa		7.42	□□□□□ -1.22
LGR4-206	ENST00000530658	GGCX	P38435	758 aa		7.42	□□□□□ -1.22
LGR4-206	ENST00000530658	GPR37L1	O60883	481 aa		7.41	□□□□□ -1.22
LGR4-206	ENST00000530658	ADH1B	P00325	375 aa		7.41	□□□□□ -1.22
LGR4-206	ENST00000530658	MSS51	Q4VC12	460 aa		7.41	□□□□□ -1.22
LGR4-206	ENST00000530658	LYPD8	Q6UX82	237 aa		7.41	□□□□□ -1.22
LGR4-206	ENST00000530658	SPSB2	Q99619	263 aa		7.41	□□□□□ -1.22
LGR4-206	ENST00000530658	C1orf115	Q9H7X2	142 aa		7.41	□□□□□ -1.22
LGR4-206	ENST00000530658	NDUFB9	Q9Y6M9	179 aa		7.41	□□□□□ -1.22
LGR4-206	ENST00000530658	ARID3C	A6NKF2	412 aa		7.4	□□□□□ -1.22
LGR4-206	ENST00000530658	JUND	P17535	347 aa		7.4	□□□□□ -1.22
LGR4-206	ENST00000530658	FAM160A2	Q8N612	972 aa	Predicted RBP	7.4	□□□□□ -1.22
LGR4-206	ENST00000530658	EPS8L1	Q8TE68	723 aa		7.4	□□□□□ -1.22
LGR4-206	ENST00000530658	PRM3	Q9NNZ6	103 aa		7.4	□□□□□ -1.22
LGR4-206	ENST00000530658	ABL2	P42684	1182 aa		7.39	□□□□□ -1.23
LGR4-206	ENST00000530658	NR6A1	Q15406	480 aa		7.39	□□□□□ -1.23
LGR4-206	ENST00000530658	PRDM9	Q9NQV7	894 aa		7.39	□□□□□ -1.23
LGR4-206	ENST00000530658	DXO	O77932	396 aa	Known RBP	7.38	□□□□□ -1.23
LGR4-206	ENST00000530658	PTPRN	Q16849	979 aa		7.38	□□□□□ -1.23
LGR4-206	ENST00000530658		V9GY48	417 aa	Predicted RBP	7.38	□□□□□ -1.23
LGR4-206	ENST00000530658	F12	P00748	615 aa	Predicted RBP	7.37	□□□□□ -1.23
LGR4-206	ENST00000530658	MMP16	P51512	607 aa		7.37	□□□□□ -1.23
LGR4-206	ENST00000530658	IRF5	Q13568	498 aa		7.37	□□□□□ -1.23
LGR4-206	ENST00000530658	RNF223	E7ERA6	249 aa		7.36	□□□□□ -1.23
LGR4-206	ENST00000530658	PRKD2	Q9BZL6	878 aa		7.36	□□□□□ -1.23
LGR4-206	ENST00000530658	SLC6A16	Q9GZN6	736 aa		7.36	□□□□□ -1.23
LGR4-206	ENST00000530658	MAP10	Q9P2G4	905 aa		7.36	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms