RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 POGKQ9P215 609 aa30.33■■■□□ 2.45
CAPN1-220ENST00000530567 CDC42BPGQ6DT37 1551 aa30.33■■■□□ 2.45
CAPN1-220ENST00000530567 SAFB2Q14151 953 aaKnown RBP eCLIP30.32■■■□□ 2.44
CAPN1-220ENST00000530567 ADGRB2O60241 1585 aa30.31■■■□□ 2.44
CAPN1-220ENST00000530567 QRICH2Q9H0J4 1663 aa30.29■■■□□ 2.44
CAPN1-220ENST00000530567 CENPJQ9HC77 1338 aaPredicted RBP30.27■■■□□ 2.44
CAPN1-220ENST00000530567 UBAP1LF5GYI3 381 aa30.27■■■□□ 2.44
CAPN1-220ENST00000530567 EIF3AQ14152 1382 aaKnown RBP30.27■■■□□ 2.44
CAPN1-220ENST00000530567 CADPS2Q86UW7 1296 aa30.25■■■□□ 2.43
CAPN1-220ENST00000530567 MINK1Q8N4C8 1332 aaPredicted RBP30.25■■■□□ 2.43
CAPN1-220ENST00000530567 MST1RQ04912 1400 aa30.24■■■□□ 2.43
CAPN1-220ENST00000530567 TOM1O60784 492 aa30.23■■■□□ 2.43
CAPN1-220ENST00000530567 ATF3P18847 181 aa30.23■■■□□ 2.43
CAPN1-220ENST00000530567 FMN2Q9NZ56 1722 aa30.23■■■□□ 2.43
CAPN1-220ENST00000530567 USP47Q96K76 1375 aa30.22■■■□□ 2.43
CAPN1-220ENST00000530567 HIRIP3Q9BW71 556 aaPredicted RBP30.22■■■□□ 2.43
CAPN1-220ENST00000530567 SLAIN2Q9P270 581 aa30.18■■■□□ 2.42
CAPN1-220ENST00000530567 SBNO2Q9Y2G9 1366 aa30.17■■■□□ 2.42
CAPN1-220ENST00000530567 C1orf167Q5SNV9 1468 aa30.16■■■□□ 2.42
CAPN1-220ENST00000530567 TULP4Q9NRJ4 1543 aa30.16■■■□□ 2.42
CAPN1-220ENST00000530567 FBXO41Q8TF61 875 aa30.16■■■□□ 2.42
CAPN1-220ENST00000530567 USP32Q8NFA0 1604 aa30.14■■■□□ 2.42
CAPN1-220ENST00000530567 ST20-MTHFSA0A0A6YYL1 179 aa30.13■■■□□ 2.41
CAPN1-220ENST00000530567 WASLO00401 505 aaPredicted RBP30.13■■■□□ 2.41
CAPN1-220ENST00000530567 ROBO1Q9Y6N7 1651 aa30.13■■■□□ 2.41
CAPN1-220ENST00000530567 PIP4K2BP78356 416 aa30.13■■■□□ 2.41
CAPN1-220ENST00000530567 TESK2Q96S53 571 aa30.11■■■□□ 2.41
CAPN1-220ENST00000530567 NUTM2FA1L443 756 aa30.1■■■□□ 2.41
CAPN1-220ENST00000530567 ANKARQ7Z5J8 1434 aa30.09■■■□□ 2.41
CAPN1-220ENST00000530567 RGPD8O14715 1765 aaPredicted RBP30.09■■■□□ 2.41
CAPN1-220ENST00000530567 PRR36Q9H6K5 1346 aa30.08■■■□□ 2.41
CAPN1-220ENST00000530567 ATP7BP35670 1465 aa30.08■■■□□ 2.41
CAPN1-220ENST00000530567 BRINP3Q76B58 766 aa30.07■■■□□ 2.4
CAPN1-220ENST00000530567 CDK19Q9BWU1 502 aa30.07■■■□□ 2.4
CAPN1-220ENST00000530567 SCAF1Q9H7N4 1312 aaKnown RBP30.07■■■□□ 2.4
CAPN1-220ENST00000530567 ORAI2Q96SN7 254 aa30.05■■■□□ 2.4
CAPN1-220ENST00000530567 EIF4G2P78344 907 aaKnown RBP eCLIP30.04■■■□□ 2.4
CAPN1-220ENST00000530567 EVC2Q86UK5 1308 aa30.03■■■□□ 2.4
CAPN1-220ENST00000530567 TOPAZ1Q8N9V7 1692 aa30.03■■■□□ 2.4
CAPN1-220ENST00000530567 HSPA5P11021 654 aaKnown RBP30.02■■■□□ 2.4
CAPN1-220ENST00000530567 CABP2Q9NPB3 220 aa30■■■□□ 2.39
CAPN1-220ENST00000530567 ZEB1P37275 1124 aaPredicted RBP29.99■■■□□ 2.39
CAPN1-220ENST00000530567 NUDT16Q96DE0 195 aaKnown RBP29.99■■■□□ 2.39
CAPN1-220ENST00000530567 ITSN1Q15811 1721 aa29.99■■■□□ 2.39
CAPN1-220ENST00000530567 NHSL1Q5SYE7 1610 aa29.99■■■□□ 2.39
CAPN1-220ENST00000530567 KIF1AQ12756 1690 aa29.99■■■□□ 2.39
CAPN1-220ENST00000530567 AHDC1Q5TGY3 1603 aaPredicted RBP29.98■■■□□ 2.39
CAPN1-220ENST00000530567 SRPK2P78362 688 aaKnown RBP29.98■■■□□ 2.39
CAPN1-220ENST00000530567 ESCO1Q5FWF5 840 aa29.98■■■□□ 2.39
CAPN1-220ENST00000530567 DISP3Q9P2K9 1392 aa29.98■■■□□ 2.39
CAPN1-220ENST00000530567 ILDR1Q86SU0 546 aaPredicted RBP29.93■■■□□ 2.38
CAPN1-220ENST00000530567 PHF8Q9UPP1 1060 aa29.93■■■□□ 2.38
CAPN1-220ENST00000530567 SLC24A1O60721 1099 aa29.92■■■□□ 2.38
CAPN1-220ENST00000530567 DDX17Q92841 729 aaKnown RBP29.92■■■□□ 2.38
CAPN1-220ENST00000530567 CCDC61Q9Y6R9 512 aa29.92■■■□□ 2.38
CAPN1-220ENST00000530567 PHLPP1O60346 1717 aa29.91■■■□□ 2.38
CAPN1-220ENST00000530567 COL16A1Q07092 1604 aaPredicted RBP29.91■■■□□ 2.38
CAPN1-220ENST00000530567 HSPA1LP34931 641 aa29.9■■■□□ 2.38
CAPN1-220ENST00000530567 TMF1P82094 1093 aa29.9■■■□□ 2.38
CAPN1-220ENST00000530567 ATAD2Q6PL18 1390 aa29.9■■■□□ 2.38
CAPN1-220ENST00000530567 PUS7Q96PZ0 661 aaKnown RBP29.89■■■□□ 2.38
CAPN1-220ENST00000530567 PPIP5K1Q6PFW1 1433 aa29.89■■■□□ 2.38
CAPN1-220ENST00000530567 PMFBP1Q8TBY8 1022 aa29.88■■■□□ 2.37
CAPN1-220ENST00000530567 PXDNQ92626 1479 aa29.88■■■□□ 2.37
CAPN1-220ENST00000530567 FOXO3O43524 673 aa29.88■■■□□ 2.37
CAPN1-220ENST00000530567 PLEKHG3A1L390 1219 aa29.86■■■□□ 2.37
CAPN1-220ENST00000530567 POLR3AO14802 1390 aaPredicted RBP29.85■■■□□ 2.37
CAPN1-220ENST00000530567 NPHP3Q7Z494 1330 aa29.85■■■□□ 2.37
CAPN1-220ENST00000530567 SOS2Q07890 1332 aaPredicted RBP29.84■■■□□ 2.37
CAPN1-220ENST00000530567 CABP1Q9NZU7 370 aa29.83■■■□□ 2.37
CAPN1-220ENST00000530567 C11orf95C9JLR9 678 aaPredicted RBP29.8■■■□□ 2.36
CAPN1-220ENST00000530567 XPCQ01831 940 aaPredicted RBP29.8■■■□□ 2.36
CAPN1-220ENST00000530567 ACEP12821 1306 aa29.8■■■□□ 2.36
CAPN1-220ENST00000530567 TRPM3Q9HCF6 1732 aaPredicted RBP29.79■■■□□ 2.36
CAPN1-220ENST00000530567 CDCA8Q53HL2 280 aa29.79■■■□□ 2.36
CAPN1-220ENST00000530567 NGDNQ8NEJ9 315 aaKnown RBP29.79■■■□□ 2.36
CAPN1-220ENST00000530567 CD163L1Q9NR16 1453 aa29.78■■■□□ 2.36
CAPN1-220ENST00000530567 MYOM1P52179 1685 aa29.78■■■□□ 2.36
CAPN1-220ENST00000530567 AKAP12Q02952 1782 aa29.77■■■□□ 2.36
CAPN1-220ENST00000530567 KRT28Q7Z3Y7 464 aa29.76■■■□□ 2.35
CAPN1-220ENST00000530567 SLC12A5Q9H2X9 1139 aa29.76■■■□□ 2.35
CAPN1-220ENST00000530567 CPSF1Q10570 1443 aaKnown RBP29.76■■■□□ 2.35
CAPN1-220ENST00000530567 NINLQ9Y2I6 1382 aa29.75■■■□□ 2.35
CAPN1-220ENST00000530567 PSME1Q06323 249 aa29.74■■■□□ 2.35
CAPN1-220ENST00000530567 TMC1Q8TDI8 760 aa29.73■■■□□ 2.35
CAPN1-220ENST00000530567 SBNO1A3KN83 1393 aa29.72■■■□□ 2.35
CAPN1-220ENST00000530567 USP6P35125 1406 aa29.72■■■□□ 2.35
CAPN1-220ENST00000530567 MON2Q7Z3U7 1717 aa29.71■■■□□ 2.35
CAPN1-220ENST00000530567 SHPRHQ149N8 1683 aa29.7■■■□□ 2.35
CAPN1-220ENST00000530567 NRKQ7Z2Y5 1582 aa29.7■■■□□ 2.34
CAPN1-220ENST00000530567 LRRC59Q96AG4 307 aaKnown RBP29.7■■■□□ 2.34
CAPN1-220ENST00000530567 KIF7Q2M1P5 1343 aa29.7■■■□□ 2.34
CAPN1-220ENST00000530567 SPATA31A3Q5VYP0 1347 aa29.7■■■□□ 2.34
CAPN1-220ENST00000530567 ALS2Q96Q42 1657 aa29.69■■■□□ 2.34
CAPN1-220ENST00000530567 TNS3Q68CZ2 1445 aa29.69■■■□□ 2.34
CAPN1-220ENST00000530567 SSH2Q76I76 1423 aa29.69■■■□□ 2.34
CAPN1-220ENST00000530567 A0A1W2PP64 1363 aa29.69■■■□□ 2.34
CAPN1-220ENST00000530567 JCADQ9P266 1359 aa29.69■■■□□ 2.34
CAPN1-220ENST00000530567 PNPLA6Q8IY17 1366 aa29.68■■■□□ 2.34
CAPN1-220ENST00000530567 ANKRD36BQ8N2N9 1353 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms