RNA–Protein interactions for RNA: ENST00000530521.1

USP35-205, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 598 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-205ENST00000530521 PLEKHG5O94827 1062 aa13.12□□□□□ -0.31
USP35-205ENST00000530521 STK26Q9P289 416 aa13.12□□□□□ -0.31
USP35-205ENST00000530521 ATRNO75882 1429 aa13.12□□□□□ -0.31
USP35-205ENST00000530521 MARF1Q9Y4F3 1742 aaKnown RBP13.11□□□□□ -0.31
USP35-205ENST00000530521 WAPLQ7Z5K2 1190 aa13.11□□□□□ -0.31
USP35-205ENST00000530521 BCL9LQ86UU0 1499 aa13.1□□□□□ -0.31
USP35-205ENST00000530521 FOXD1Q16676 465 aa13.1□□□□□ -0.31
USP35-205ENST00000530521 GJD4Q96KN9 370 aaPredicted RBP13.1□□□□□ -0.31
USP35-205ENST00000530521 COL22A1Q8NFW1 1626 aaPredicted RBP13.1□□□□□ -0.31
USP35-205ENST00000530521 BRWD3Q6RI45 1802 aa13.09□□□□□ -0.31
USP35-205ENST00000530521 PTCH1Q13635 1447 aa13.09□□□□□ -0.31
USP35-205ENST00000530521 PPLO60437 1756 aa13.08□□□□□ -0.32
USP35-205ENST00000530521 DEFB132Q7Z7B7 95 aa13.08□□□□□ -0.32
USP35-205ENST00000530521 RGL3Q3MIN7 710 aa13.07□□□□□ -0.32
USP35-205ENST00000530521 TMEM132EQ6IEE7 984 aa13.07□□□□□ -0.32
USP35-205ENST00000530521 NPHP3Q7Z494 1330 aa13.07□□□□□ -0.32
USP35-205ENST00000530521 RGPD8O14715 1765 aaPredicted RBP13.07□□□□□ -0.32
USP35-205ENST00000530521 MYOM2P54296 1465 aa13.06□□□□□ -0.32
USP35-205ENST00000530521 PXDNQ92626 1479 aa13.06□□□□□ -0.32
USP35-205ENST00000530521 CCDC125Q86Z20 511 aa13.06□□□□□ -0.32
USP35-205ENST00000530521 ADGRF5Q8IZF2 1346 aa13.06□□□□□ -0.32
USP35-205ENST00000530521 CABLES1Q8TDN4 633 aa13.05□□□□□ -0.32
USP35-205ENST00000530521 SLC4A1APQ9BWU0 796 aaKnown RBP13.05□□□□□ -0.32
USP35-205ENST00000530521 RPGRIP1LQ68CZ1 1315 aa13.05□□□□□ -0.32
USP35-205ENST00000530521 HFM1A2PYH4 1435 aa13.05□□□□□ -0.32
USP35-205ENST00000530521 NAIPQ13075 1403 aa13.05□□□□□ -0.32
USP35-205ENST00000530521 UNC5CLQ8IV45 518 aa13.04□□□□□ -0.32
USP35-205ENST00000530521 PLEKHH1Q9ULM0 1364 aa13.04□□□□□ -0.32
USP35-205ENST00000530521 GLI3P10071 1580 aa13.03□□□□□ -0.32
USP35-205ENST00000530521 KRT28Q7Z3Y7 464 aa13.03□□□□□ -0.32
USP35-205ENST00000530521 RALGAPBQ86X10 1494 aa13.02□□□□□ -0.33
USP35-205ENST00000530521 SEPT12Q8IYM1 358 aa13.01□□□□□ -0.33
USP35-205ENST00000530521 SPATA31A3Q5VYP0 1347 aa13.01□□□□□ -0.33
USP35-205ENST00000530521 HAP1P54257 671 aaPredicted RBP13□□□□□ -0.33
USP35-205ENST00000530521 LMOD2Q6P5Q4 547 aa13□□□□□ -0.33
USP35-205ENST00000530521 CCDC9Q9Y3X0 531 aaKnown RBP13□□□□□ -0.33
USP35-205ENST00000530521 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
USP35-205ENST00000530521 PRAG1Q86YV5 1406 aa12.99□□□□□ -0.33
USP35-205ENST00000530521 LRPPRCP42704 1394 aaKnown RBP12.99□□□□□ -0.33
USP35-205ENST00000530521 PSDA5PKW4 1024 aaPredicted RBP12.99□□□□□ -0.33
USP35-205ENST00000530521 TRIM26Q12899 539 aaPredicted RBP12.99□□□□□ -0.33
USP35-205ENST00000530521 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.99□□□□□ -0.33
USP35-205ENST00000530521 SLIT2O94813 1529 aa12.98□□□□□ -0.33
USP35-205ENST00000530521 SAFB2Q14151 953 aaKnown RBP eCLIP12.98□□□□□ -0.33
USP35-205ENST00000530521 BLMP54132 1417 aaPredicted RBP12.97□□□□□ -0.33
USP35-205ENST00000530521 FMN2Q9NZ56 1722 aa12.97□□□□□ -0.33
USP35-205ENST00000530521 FAM83GA6ND36 823 aa12.97□□□□□ -0.33
USP35-205ENST00000530521 SF3B2Q13435 895 aaKnown RBP12.97□□□□□ -0.33
USP35-205ENST00000530521 FAM182BQ5T319 152 aa12.97□□□□□ -0.33
USP35-205ENST00000530521 KRT27Q7Z3Y8 459 aa12.96□□□□□ -0.33
USP35-205ENST00000530521 PMFBP1Q8TBY8 1022 aa12.96□□□□□ -0.33
USP35-205ENST00000530521 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.34
USP35-205ENST00000530521 A0A0G2JS52 829 aa12.95□□□□□ -0.34
USP35-205ENST00000530521 MYT1Q01538 1121 aa12.95□□□□□ -0.34
USP35-205ENST00000530521 PSME1Q06323 249 aa12.95□□□□□ -0.34
USP35-205ENST00000530521 VPS72Q15906 364 aa12.95□□□□□ -0.34
USP35-205ENST00000530521 PHF8Q9UPP1 1060 aa12.95□□□□□ -0.34
USP35-205ENST00000530521 USP32Q8NFA0 1604 aa12.95□□□□□ -0.34
USP35-205ENST00000530521 ABCC11Q96J66 1382 aa12.94□□□□□ -0.34
USP35-205ENST00000530521 IFT172Q9UG01 1749 aa12.94□□□□□ -0.34
USP35-205ENST00000530521 PLCH1Q4KWH8 1693 aa12.94□□□□□ -0.34
USP35-205ENST00000530521 ONECUT3O60422 494 aaPredicted RBP12.94□□□□□ -0.34
USP35-205ENST00000530521 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
USP35-205ENST00000530521 CFAP70Q5T0N1 1121 aa12.93□□□□□ -0.34
USP35-205ENST00000530521 TECPR2O15040 1411 aa12.92□□□□□ -0.34
USP35-205ENST00000530521 EN1Q05925 392 aaPredicted RBP12.92□□□□□ -0.34
USP35-205ENST00000530521 KNDC1Q76NI1 1749 aa12.92□□□□□ -0.34
USP35-205ENST00000530521 MPHOSPH9Q99550 1183 aa12.92□□□□□ -0.34
USP35-205ENST00000530521 YTHDC2Q9H6S0 1430 aaKnown RBP12.92□□□□□ -0.34
USP35-205ENST00000530521 KIF1AQ12756 1690 aa12.92□□□□□ -0.34
USP35-205ENST00000530521 CCDC144AA2RUR9 1427 aa12.91□□□□□ -0.34
USP35-205ENST00000530521 SPATA31E1Q6ZUB1 1445 aa12.91□□□□□ -0.34
USP35-205ENST00000530521 PRAM1Q96QH2 718 aa12.91□□□□□ -0.34
USP35-205ENST00000530521 PCGF6Q9BYE7 350 aa12.91□□□□□ -0.34
USP35-205ENST00000530521 BTG4Q9NY30 223 aa12.91□□□□□ -0.34
USP35-205ENST00000530521 TNS3Q68CZ2 1445 aa12.9□□□□□ -0.34
USP35-205ENST00000530521 HRCP23327 699 aa12.9□□□□□ -0.34
USP35-205ENST00000530521 C14orf93Q9H972 538 aaKnown RBP12.9□□□□□ -0.34
USP35-205ENST00000530521 ABCA3Q99758 1704 aa12.9□□□□□ -0.34
USP35-205ENST00000530521 NWD2Q9ULI1 1742 aa12.9□□□□□ -0.34
USP35-205ENST00000530521 HIRIP3Q9BW71 556 aaPredicted RBP12.89□□□□□ -0.35
USP35-205ENST00000530521 ANKRD30BQ9BXX2 1392 aa12.89□□□□□ -0.35
USP35-205ENST00000530521 PIK3C2GO75747 1445 aa12.88□□□□□ -0.35
USP35-205ENST00000530521 BAG6P46379 1132 aa12.88□□□□□ -0.35
USP35-205ENST00000530521 R3HDM1Q15032 1099 aaKnown RBP12.88□□□□□ -0.35
USP35-205ENST00000530521 SIRT1Q96EB6 747 aa12.88□□□□□ -0.35
USP35-205ENST00000530521 POGKQ9P215 609 aa12.87□□□□□ -0.35
USP35-205ENST00000530521 NRXN1Q9ULB1 1477 aa12.86□□□□□ -0.35
USP35-205ENST00000530521 SBNO1A3KN83 1393 aa12.86□□□□□ -0.35
USP35-205ENST00000530521 DHX57Q6P158 1386 aaKnown RBP12.86□□□□□ -0.35
USP35-205ENST00000530521 EZH2Q15910 746 aaKnown RBP12.86□□□□□ -0.35
USP35-205ENST00000530521 TRAK1Q9UPV9 953 aa12.86□□□□□ -0.35
USP35-205ENST00000530521 LRP5O75197 1615 aa12.86□□□□□ -0.35
USP35-205ENST00000530521 NRAPQ86VF7 1730 aa12.85□□□□□ -0.35
USP35-205ENST00000530521 PAK3O75914 559 aaPredicted RBP12.85□□□□□ -0.35
USP35-205ENST00000530521 MINK1Q8N4C8 1332 aaPredicted RBP12.85□□□□□ -0.35
USP35-205ENST00000530521 ARHGEF10O15013 1369 aa12.83□□□□□ -0.36
USP35-205ENST00000530521 TRPM3Q9HCF6 1732 aaPredicted RBP12.83□□□□□ -0.36
USP35-205ENST00000530521 TRIM37O94972 964 aa12.83□□□□□ -0.36
USP35-205ENST00000530521 KDM2AQ9Y2K7 1162 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms