RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 IRF6O14896 467 aa7.72□□□□□ -1.17
NUP98-218ENST00000530516 KDM4AO75164 1064 aa7.72□□□□□ -1.17
NUP98-218ENST00000530516 MMP16P51512 607 aa7.72□□□□□ -1.17
NUP98-218ENST00000530516 ZNF775Q96BV0 537 aaPredicted RBP7.72□□□□□ -1.17
NUP98-218ENST00000530516 AAASQ9NRG9 546 aa7.72□□□□□ -1.17
NUP98-218ENST00000530516 USB1Q9BQ65 265 aaKnown RBP7.71□□□□□ -1.18
NUP98-218ENST00000530516 SMCPP49901 116 aaPredicted RBP7.7□□□□□ -1.18
NUP98-218ENST00000530516 RNF19BQ6ZMZ0 732 aa7.7□□□□□ -1.18
NUP98-218ENST00000530516 REPIN1Q9BWE0 567 aaKnown RBP7.7□□□□□ -1.18
NUP98-218ENST00000530516 WNT7AO00755 349 aa7.69□□□□□ -1.18
NUP98-218ENST00000530516 CLCN1P35523 988 aa7.69□□□□□ -1.18
NUP98-218ENST00000530516 PRDM9Q9NQV7 894 aa7.69□□□□□ -1.18
NUP98-218ENST00000530516 TTC24A2A3L6 582 aaPredicted RBP7.68□□□□□ -1.18
NUP98-218ENST00000530516 AXIN1O15169 862 aa7.68□□□□□ -1.18
NUP98-218ENST00000530516 DXOO77932 396 aaKnown RBP7.68□□□□□ -1.18
NUP98-218ENST00000530516 MDM2Q00987 491 aaPredicted RBP7.67□□□□□ -1.18
NUP98-218ENST00000530516 TRIM32Q13049 653 aa7.67□□□□□ -1.18
NUP98-218ENST00000530516 SNIP1Q8TAD8 396 aaKnown RBP7.67□□□□□ -1.18
NUP98-218ENST00000530516 GPCPD1Q9NPB8 672 aa7.67□□□□□ -1.18
NUP98-218ENST00000530516 ST8SIA5O15466 376 aa7.66□□□□□ -1.18
NUP98-218ENST00000530516 HOXA2O43364 376 aa7.65□□□□□ -1.18
NUP98-218ENST00000530516 WNT7BP56706 349 aa7.65□□□□□ -1.18
NUP98-218ENST00000530516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.65□□□□□ -1.18
NUP98-218ENST00000530516 KRI1Q8N9T8 703 aaKnown RBP7.65□□□□□ -1.18
NUP98-218ENST00000530516 CCDC102AQ96A19 550 aa7.65□□□□□ -1.18
NUP98-218ENST00000530516 NUTM1Q86Y26 1132 aa7.63□□□□□ -1.19
NUP98-218ENST00000530516 FAM217BQ9NTX9 383 aaPredicted RBP7.63□□□□□ -1.19
NUP98-218ENST00000530516 POTECB2RU33 542 aa7.62□□□□□ -1.19
NUP98-218ENST00000530516 JUNDP17535 347 aa7.62□□□□□ -1.19
NUP98-218ENST00000530516 RETREG3Q86VR2 466 aa7.62□□□□□ -1.19
NUP98-218ENST00000530516 TREML4Q6UXN2 200 aa7.61□□□□□ -1.19
NUP98-218ENST00000530516 SENP2Q9HC62 589 aa7.61□□□□□ -1.19
NUP98-218ENST00000530516 C11orf95C9JLR9 678 aaPredicted RBP7.6□□□□□ -1.19
NUP98-218ENST00000530516 CCDC24Q8N4L8 307 aa7.6□□□□□ -1.19
NUP98-218ENST00000530516 MRGPRX2Q96LB1 330 aa7.6□□□□□ -1.19
NUP98-218ENST00000530516 SMPD1P17405 629 aa7.59□□□□□ -1.19
NUP98-218ENST00000530516 RC3H1Q5TC82 1133 aaKnown RBP7.58□□□□□ -1.2
NUP98-218ENST00000530516 KIFC2Q96AC6 838 aa7.58□□□□□ -1.2
NUP98-218ENST00000530516 GMPR2Q9P2T1 348 aaKnown RBP7.58□□□□□ -1.2
NUP98-218ENST00000530516 NUDT12Q9BQG2 462 aa7.57□□□□□ -1.2
NUP98-218ENST00000530516 FDX1P10109 184 aa7.56□□□□□ -1.2
NUP98-218ENST00000530516 HLA-CQ95604 372 aa7.56□□□□□ -1.2
NUP98-218ENST00000530516 ATP13A2Q9NQ11 1180 aa7.56□□□□□ -1.2
NUP98-218ENST00000530516 SPDYE5A6NIY4 337 aa7.55□□□□□ -1.2
NUP98-218ENST00000530516 DIXDC1Q155Q3 683 aa7.55□□□□□ -1.2
NUP98-218ENST00000530516 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
NUP98-218ENST00000530516 DACH1Q9UI36 760 aa7.55□□□□□ -1.2
NUP98-218ENST00000530516 C6orf229H3BNL8 230 aa7.54□□□□□ -1.2
NUP98-218ENST00000530516 J3QL48 77 aa7.54□□□□□ -1.2
NUP98-218ENST00000530516 WFS1O76024 890 aa7.54□□□□□ -1.2
NUP98-218ENST00000530516 MS4A1P11836 297 aa7.54□□□□□ -1.2
NUP98-218ENST00000530516 SSTR3P32745 418 aaPredicted RBP7.54□□□□□ -1.2
NUP98-218ENST00000530516 GJA5P36382 358 aa7.54□□□□□ -1.2
NUP98-218ENST00000530516 SKOR1P84550 965 aa7.54□□□□□ -1.2
NUP98-218ENST00000530516 PTPRNQ16849 979 aa7.54□□□□□ -1.2
NUP98-218ENST00000530516 TRIM47Q96LD4 638 aa7.54□□□□□ -1.2
NUP98-218ENST00000530516 CCNYL3P0C7X3 344 aa7.53□□□□□ -1.2
NUP98-218ENST00000530516 GUCA2AQ02747 115 aa7.53□□□□□ -1.2
NUP98-218ENST00000530516 AMHR2Q16671 573 aa7.53□□□□□ -1.2
NUP98-218ENST00000530516 DESI1Q6ICB0 168 aa7.53□□□□□ -1.2
NUP98-218ENST00000530516 EHBP1Q8NDI1 1231 aa7.53□□□□□ -1.2
NUP98-218ENST00000530516 ZC3H15Q8WU90 426 aaKnown RBP7.53□□□□□ -1.2
NUP98-218ENST00000530516 BCANQ96GW7 911 aa7.53□□□□□ -1.2
NUP98-218ENST00000530516 TTLL12Q14166 644 aaPredicted RBP7.52□□□□□ -1.21
NUP98-218ENST00000530516 BARGINQ6ZT62 677 aa7.52□□□□□ -1.21
NUP98-218ENST00000530516 ZMYND10O75800 440 aa7.51□□□□□ -1.21
NUP98-218ENST00000530516 SPIRE2Q8WWL2 714 aa7.51□□□□□ -1.21
NUP98-218ENST00000530516 HPS1Q92902 700 aa7.51□□□□□ -1.21
NUP98-218ENST00000530516 WIPF1O43516 503 aa7.5□□□□□ -1.21
NUP98-218ENST00000530516 ALDH1A1P00352 501 aa7.5□□□□□ -1.21
NUP98-218ENST00000530516 INSM1Q01101 510 aaPredicted RBP7.5□□□□□ -1.21
NUP98-218ENST00000530516 SYMPKQ92797 1274 aaKnown RBP7.5□□□□□ -1.21
NUP98-218ENST00000530516 EVA1BQ9NVM1 165 aa7.5□□□□□ -1.21
NUP98-218ENST00000530516 WASF2Q9Y6W5 498 aa7.5□□□□□ -1.21
NUP98-218ENST00000530516 PLEKHG3A1L390 1219 aa7.49□□□□□ -1.21
NUP98-218ENST00000530516 SIAH2O43255 324 aa7.49□□□□□ -1.21
NUP98-218ENST00000530516 NFX1Q12986 1120 aaKnown RBP7.49□□□□□ -1.21
NUP98-218ENST00000530516 MTMR2Q13614 643 aa7.49□□□□□ -1.21
NUP98-218ENST00000530516 MPNDQ8N594 471 aa7.49□□□□□ -1.21
NUP98-218ENST00000530516 PCDHGC3Q9UN70 934 aa7.49□□□□□ -1.21
NUP98-218ENST00000530516 KCNH2Q12809 1159 aa7.48□□□□□ -1.21
NUP98-218ENST00000530516 UNC93B1Q9H1C4 597 aa7.48□□□□□ -1.21
NUP98-218ENST00000530516 TERTO14746 1132 aaKnown RBP7.47□□□□□ -1.21
NUP98-218ENST00000530516 VARSP26640 1264 aaKnown RBP7.47□□□□□ -1.21
NUP98-218ENST00000530516 SH3BP2P78314 561 aa7.47□□□□□ -1.21
NUP98-218ENST00000530516 PTCRAQ6ISU1 281 aaPredicted RBP7.47□□□□□ -1.21
NUP98-218ENST00000530516 GIGYF2Q6Y7W6 1299 aaKnown RBP7.47□□□□□ -1.21
NUP98-218ENST00000530516 STK17AQ9UEE5 414 aa7.47□□□□□ -1.21
NUP98-218ENST00000530516 MOXD2PA6NHM9 499 aa7.46□□□□□ -1.22
NUP98-218ENST00000530516 NPAS3Q8IXF0 933 aa7.46□□□□□ -1.22
NUP98-218ENST00000530516 PRR7Q8TB68 274 aa7.46□□□□□ -1.22
NUP98-218ENST00000530516 SLC16A10Q8TF71 515 aa7.46□□□□□ -1.22
NUP98-218ENST00000530516 CAPN5O15484 640 aaPredicted RBP7.45□□□□□ -1.22
NUP98-218ENST00000530516 SNRPBP14678 240 aaKnown RBP7.45□□□□□ -1.22
NUP98-218ENST00000530516 BEGAINQ9BUH8 593 aa7.45□□□□□ -1.22
NUP98-218ENST00000530516 PRPF38BQ5VTL8 546 aaKnown RBP7.44□□□□□ -1.22
NUP98-218ENST00000530516 ZNF511Q8NB15 262 aa7.44□□□□□ -1.22
NUP98-218ENST00000530516 NDUFV2P19404 249 aa7.43□□□□□ -1.22
NUP98-218ENST00000530516 RSBN1LQ6PCB5 846 aaPredicted RBP7.43□□□□□ -1.22
NUP98-218ENST00000530516 TBC1D2Q9BYX2 928 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms