RNA–Protein interactions for RNA: ENST00000530513.5

PACSIN3-207, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-207ENST00000530513 UPF1Q92900 1129 aaKnown RBP eCLIP33.47■■■□□ 2.95
PACSIN3-207ENST00000530513 RGS12O14924 1447 aa33.46■■■□□ 2.95
PACSIN3-207ENST00000530513 RGL3Q3MIN7 710 aa33.45■■■□□ 2.95
PACSIN3-207ENST00000530513 MPHOSPH9Q99550 1183 aa33.45■■■□□ 2.95
PACSIN3-207ENST00000530513 PIK3C2GO75747 1445 aa33.45■■■□□ 2.94
PACSIN3-207ENST00000530513 ANKRD30BQ9BXX2 1392 aa33.44■■■□□ 2.94
PACSIN3-207ENST00000530513 ADAMTS2O95450 1211 aa33.43■■■□□ 2.94
PACSIN3-207ENST00000530513 PXDNQ92626 1479 aa33.43■■■□□ 2.94
PACSIN3-207ENST00000530513 FMN2Q9NZ56 1722 aa33.42■■■□□ 2.94
PACSIN3-207ENST00000530513 MARF1Q9Y4F3 1742 aaKnown RBP33.42■■■□□ 2.94
PACSIN3-207ENST00000530513 LRPPRCP42704 1394 aaKnown RBP33.41■■■□□ 2.94
PACSIN3-207ENST00000530513 STK26Q9P289 416 aa33.38■■■□□ 2.93
PACSIN3-207ENST00000530513 PLEKHH1Q9ULM0 1364 aa33.37■■■□□ 2.93
PACSIN3-207ENST00000530513 QTRT2Q9H974 415 aaKnown RBP33.37■■■□□ 2.93
PACSIN3-207ENST00000530513 MYOM2P54296 1465 aa33.37■■■□□ 2.93
PACSIN3-207ENST00000530513 WAPLQ7Z5K2 1190 aa33.36■■■□□ 2.93
PACSIN3-207ENST00000530513 NGLY1Q96IV0 654 aa33.36■■■□□ 2.93
PACSIN3-207ENST00000530513 RBM6P78332 1123 aaKnown RBP33.35■■■□□ 2.93
PACSIN3-207ENST00000530513 ESCO1Q5FWF5 840 aa33.35■■■□□ 2.93
PACSIN3-207ENST00000530513 NPHP3Q7Z494 1330 aa33.34■■■□□ 2.93
PACSIN3-207ENST00000530513 ABCC11Q96J66 1382 aa33.34■■■□□ 2.93
PACSIN3-207ENST00000530513 KIF1AQ12756 1690 aa33.33■■■□□ 2.93
PACSIN3-207ENST00000530513 TMEM132EQ6IEE7 984 aa33.33■■■□□ 2.93
PACSIN3-207ENST00000530513 YTHDC2Q9H6S0 1430 aaKnown RBP33.33■■■□□ 2.93
PACSIN3-207ENST00000530513 RGPD8O14715 1765 aaPredicted RBP33.31■■■□□ 2.92
PACSIN3-207ENST00000530513 NRXN1Q9ULB1 1477 aa33.31■■■□□ 2.92
PACSIN3-207ENST00000530513 NUTM2FA1L443 756 aa33.29■■■□□ 2.92
PACSIN3-207ENST00000530513 XPCQ01831 940 aaPredicted RBP33.29■■■□□ 2.92
PACSIN3-207ENST00000530513 FOXO3O43524 673 aa33.27■■■□□ 2.92
PACSIN3-207ENST00000530513 USP21Q9UK80 565 aa33.27■■■□□ 2.92
PACSIN3-207ENST00000530513 ATRNO75882 1429 aa33.25■■■□□ 2.91
PACSIN3-207ENST00000530513 FNBP4Q8N3X1 1017 aaPredicted RBP33.23■■■□□ 2.91
PACSIN3-207ENST00000530513 EP400Q96L91 3159 aa33.22■■■□□ 2.91
PACSIN3-207ENST00000530513 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.22■■■□□ 2.91
PACSIN3-207ENST00000530513 TRPC5Q9UL62 973 aaPredicted RBP33.2■■■□□ 2.91
PACSIN3-207ENST00000530513 BCL9LQ86UU0 1499 aa33.18■■■□□ 2.9
PACSIN3-207ENST00000530513 C14orf93Q9H972 538 aaKnown RBP33.18■■■□□ 2.9
PACSIN3-207ENST00000530513 RAB3GAP2Q9H2M9 1393 aa33.18■■■□□ 2.9
PACSIN3-207ENST00000530513 USP32Q8NFA0 1604 aa33.17■■■□□ 2.9
PACSIN3-207ENST00000530513 ABCA3Q99758 1704 aa33.16■■■□□ 2.9
PACSIN3-207ENST00000530513 CFAP70Q5T0N1 1121 aa33.15■■■□□ 2.9
PACSIN3-207ENST00000530513 ACIN1Q9UKV3 1341 aaKnown RBP33.15■■■□□ 2.9
PACSIN3-207ENST00000530513 ATAD2Q6PL18 1390 aa33.14■■■□□ 2.9
PACSIN3-207ENST00000530513 SIRT1Q96EB6 747 aa33.13■■■□□ 2.89
PACSIN3-207ENST00000530513 DLC1Q96QB1 1528 aa33.12■■■□□ 2.89
PACSIN3-207ENST00000530513 DHX57Q6P158 1386 aaKnown RBP33.12■■■□□ 2.89
PACSIN3-207ENST00000530513 SPATA31A3Q5VYP0 1347 aa33.12■■■□□ 2.89
PACSIN3-207ENST00000530513 ADGRB1O14514 1584 aa33.12■■■□□ 2.89
PACSIN3-207ENST00000530513 ADGRB2O60241 1585 aa33.12■■■□□ 2.89
PACSIN3-207ENST00000530513 PLCH1Q4KWH8 1693 aa33.08■■■□□ 2.89
PACSIN3-207ENST00000530513 TNS3Q68CZ2 1445 aa33.08■■■□□ 2.89
PACSIN3-207ENST00000530513 GLI3P10071 1580 aa33.08■■■□□ 2.89
PACSIN3-207ENST00000530513 SLIT2O94813 1529 aa33.07■■■□□ 2.89
PACSIN3-207ENST00000530513 PRAM1Q96QH2 718 aa33.07■■■□□ 2.88
PACSIN3-207ENST00000530513 SAFB2Q14151 953 aaKnown RBP eCLIP33.06■■■□□ 2.88
PACSIN3-207ENST00000530513 KRT28Q7Z3Y7 464 aa33.05■■■□□ 2.88
PACSIN3-207ENST00000530513 PHF8Q9UPP1 1060 aa33.04■■■□□ 2.88
PACSIN3-207ENST00000530513 TRPM3Q9HCF6 1732 aaPredicted RBP33.02■■■□□ 2.88
PACSIN3-207ENST00000530513 BRWD3Q6RI45 1802 aa33.01■■■□□ 2.87
PACSIN3-207ENST00000530513 NWD2Q9ULI1 1742 aa33.01■■■□□ 2.87
PACSIN3-207ENST00000530513 RALGAPBQ86X10 1494 aa33■■■□□ 2.87
PACSIN3-207ENST00000530513 GJD4Q96KN9 370 aaPredicted RBP33■■■□□ 2.87
PACSIN3-207ENST00000530513 ANKARQ7Z5J8 1434 aa33■■■□□ 2.87
PACSIN3-207ENST00000530513 SRCAPQ6ZRS2 3230 aa32.98■■■□□ 2.87
PACSIN3-207ENST00000530513 SBNO1A3KN83 1393 aa32.96■■■□□ 2.87
PACSIN3-207ENST00000530513 UNC5CLQ8IV45 518 aa32.96■■■□□ 2.87
PACSIN3-207ENST00000530513 ALS2Q96Q42 1657 aa32.95■■■□□ 2.87
PACSIN3-207ENST00000530513 ARHGEF28Q8N1W1 1705 aaKnown RBP32.95■■■□□ 2.87
PACSIN3-207ENST00000530513 POGKQ9P215 609 aa32.95■■■□□ 2.87
PACSIN3-207ENST00000530513 CABLES1Q8TDN4 633 aa32.94■■■□□ 2.86
PACSIN3-207ENST00000530513 PSME1Q06323 249 aa32.93■■■□□ 2.86
PACSIN3-207ENST00000530513 TULP4Q9NRJ4 1543 aa32.92■■■□□ 2.86
PACSIN3-207ENST00000530513 PLEKHG5O94827 1062 aa32.92■■■□□ 2.86
PACSIN3-207ENST00000530513 ARHGEF10O15013 1369 aa32.92■■■□□ 2.86
PACSIN3-207ENST00000530513 NRAPQ86VF7 1730 aa32.91■■■□□ 2.86
PACSIN3-207ENST00000530513 PMFBP1Q8TBY8 1022 aa32.91■■■□□ 2.86
PACSIN3-207ENST00000530513 TRAK1Q9UPV9 953 aa32.91■■■□□ 2.86
PACSIN3-207ENST00000530513 HAP1P54257 671 aaPredicted RBP32.9■■■□□ 2.86
PACSIN3-207ENST00000530513 HIRIP3Q9BW71 556 aaPredicted RBP32.9■■■□□ 2.86
PACSIN3-207ENST00000530513 CRYBG1Q9Y4K1 1723 aa32.9■■■□□ 2.86
PACSIN3-207ENST00000530513 DCAF11Q8TEB1 546 aa32.88■■■□□ 2.85
PACSIN3-207ENST00000530513 KDM2AQ9Y2K7 1162 aa32.88■■■□□ 2.85
PACSIN3-207ENST00000530513 MINK1Q8N4C8 1332 aaPredicted RBP32.87■■■□□ 2.85
PACSIN3-207ENST00000530513 LMOD2Q6P5Q4 547 aa32.87■■■□□ 2.85
PACSIN3-207ENST00000530513 ITSN1Q15811 1721 aa32.87■■■□□ 2.85
PACSIN3-207ENST00000530513 PRR36Q9H6K5 1346 aa32.86■■■□□ 2.85
PACSIN3-207ENST00000530513 EIF3AQ14152 1382 aaKnown RBP32.83■■■□□ 2.85
PACSIN3-207ENST00000530513 COL14A1Q05707 1796 aaKnown RBP32.81■■■□□ 2.84
PACSIN3-207ENST00000530513 VPS72Q15906 364 aa32.8■■■□□ 2.84
PACSIN3-207ENST00000530513 CCDC125Q86Z20 511 aa32.78■■■□□ 2.84
PACSIN3-207ENST00000530513 ATP7BP35670 1465 aa32.78■■■□□ 2.84
PACSIN3-207ENST00000530513 BLMP54132 1417 aaPredicted RBP32.77■■■□□ 2.84
PACSIN3-207ENST00000530513 WASLO00401 505 aaPredicted RBP32.77■■■□□ 2.84
PACSIN3-207ENST00000530513 GPRASP1Q5JY77 1395 aa32.77■■■□□ 2.84
PACSIN3-207ENST00000530513 TOPAZ1Q8N9V7 1692 aa32.76■■■□□ 2.84
PACSIN3-207ENST00000530513 KIAA1210Q9ULL0 1709 aa32.76■■■□□ 2.83
PACSIN3-207ENST00000530513 FAM83GA6ND36 823 aa32.75■■■□□ 2.83
PACSIN3-207ENST00000530513 SEPT12Q8IYM1 358 aa32.75■■■□□ 2.83
PACSIN3-207ENST00000530513 CCDC9Q9Y3X0 531 aaKnown RBP32.74■■■□□ 2.83
PACSIN3-207ENST00000530513 PHRF1Q9P1Y6 1649 aaKnown RBP32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms