RNA–Protein interactions for RNA: ENST00000530470.1

TRIM29-215, Transcript of tripartite motif containing 29, humanhuman

TSL 2

Gene TRIM29, Length 771 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-215ENST00000530470 NRXN1Q9ULB1 1477 aa17.34■□□□□ 0.37
TRIM29-215ENST00000530470 LAMC1P11047 1609 aa17.33■□□□□ 0.37
TRIM29-215ENST00000530470 ABCC11Q96J66 1382 aa17.33■□□□□ 0.36
TRIM29-215ENST00000530470 MEX3CQ5U5Q3 659 aaKnown RBP17.33■□□□□ 0.36
TRIM29-215ENST00000530470 LRRC59Q96AG4 307 aaKnown RBP17.33■□□□□ 0.36
TRIM29-215ENST00000530470 YTHDC2Q9H6S0 1430 aaKnown RBP17.32■□□□□ 0.36
TRIM29-215ENST00000530470 WAPLQ7Z5K2 1190 aa17.32■□□□□ 0.36
TRIM29-215ENST00000530470 ORAI2Q96SN7 254 aa17.32■□□□□ 0.36
TRIM29-215ENST00000530470 C14orf93Q9H972 538 aaKnown RBP17.32■□□□□ 0.36
TRIM29-215ENST00000530470 NUTM2BA6NNL0 878 aaPredicted RBP17.3■□□□□ 0.36
TRIM29-215ENST00000530470 NUTM2EB1AL46 878 aaPredicted RBP17.3■□□□□ 0.36
TRIM29-215ENST00000530470 CFAP70Q5T0N1 1121 aa17.3■□□□□ 0.36
TRIM29-215ENST00000530470 NUTM2AQ8IVF1 878 aaPredicted RBP17.3■□□□□ 0.36
TRIM29-215ENST00000530470 PLEKHH1Q9ULM0 1364 aa17.29■□□□□ 0.36
TRIM29-215ENST00000530470 PNPLA6Q8IY17 1366 aa17.28■□□□□ 0.36
TRIM29-215ENST00000530470 DHX57Q6P158 1386 aaKnown RBP17.28■□□□□ 0.36
TRIM29-215ENST00000530470 SOS2Q07890 1332 aaPredicted RBP17.27■□□□□ 0.36
TRIM29-215ENST00000530470 SIRT1Q96EB6 747 aa17.27■□□□□ 0.36
TRIM29-215ENST00000530470 ESCO1Q5FWF5 840 aa17.26■□□□□ 0.35
TRIM29-215ENST00000530470 ZNF772Q68DY9 489 aaPredicted RBP17.26■□□□□ 0.35
TRIM29-215ENST00000530470 FMN2Q9NZ56 1722 aa17.24■□□□□ 0.35
TRIM29-215ENST00000530470 NUTM2FA1L443 756 aa17.24■□□□□ 0.35
TRIM29-215ENST00000530470 NPHP3Q7Z494 1330 aa17.23■□□□□ 0.35
TRIM29-215ENST00000530470 DCAF11Q8TEB1 546 aa17.23■□□□□ 0.35
TRIM29-215ENST00000530470 KDM2AQ9Y2K7 1162 aa17.23■□□□□ 0.35
TRIM29-215ENST00000530470 ADGRB1O14514 1584 aa17.22■□□□□ 0.35
TRIM29-215ENST00000530470 DLC1Q96QB1 1528 aa17.21■□□□□ 0.35
TRIM29-215ENST00000530470 PXDNQ92626 1479 aa17.21■□□□□ 0.35
TRIM29-215ENST00000530470 STAC3Q96MF2 364 aa17.21■□□□□ 0.35
TRIM29-215ENST00000530470 PRAM1Q96QH2 718 aa17.21■□□□□ 0.35
TRIM29-215ENST00000530470 AFF2P51816 1311 aa17.21■□□□□ 0.34
TRIM29-215ENST00000530470 FOXO3O43524 673 aa17.2■□□□□ 0.34
TRIM29-215ENST00000530470 C8orf37Q96NL8 207 aa17.2■□□□□ 0.34
TRIM29-215ENST00000530470 COL22A1Q8NFW1 1626 aaPredicted RBP17.2■□□□□ 0.34
TRIM29-215ENST00000530470 KIF1AQ12756 1690 aa17.2■□□□□ 0.34
TRIM29-215ENST00000530470 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.34
TRIM29-215ENST00000530470 ADAMTS2O95450 1211 aa17.18■□□□□ 0.34
TRIM29-215ENST00000530470 POGKQ9P215 609 aa17.18■□□□□ 0.34
TRIM29-215ENST00000530470 XPCQ01831 940 aaPredicted RBP17.17■□□□□ 0.34
TRIM29-215ENST00000530470 TRAK1Q9UPV9 953 aa17.17■□□□□ 0.34
TRIM29-215ENST00000530470 RGPD8O14715 1765 aaPredicted RBP17.16■□□□□ 0.34
TRIM29-215ENST00000530470 RXRBP28702 533 aa17.16■□□□□ 0.34
TRIM29-215ENST00000530470 ADGRB2O60241 1585 aa17.15■□□□□ 0.34
TRIM29-215ENST00000530470 NGLY1Q96IV0 654 aa17.15■□□□□ 0.34
TRIM29-215ENST00000530470 PHF8Q9UPP1 1060 aa17.13■□□□□ 0.33
TRIM29-215ENST00000530470 CDK12Q9NYV4 1490 aaPredicted RBP17.12■□□□□ 0.33
TRIM29-215ENST00000530470 USP32Q8NFA0 1604 aa17.12■□□□□ 0.33
TRIM29-215ENST00000530470 QTRT2Q9H974 415 aaKnown RBP17.12■□□□□ 0.33
TRIM29-215ENST00000530470 ANKARQ7Z5J8 1434 aa17.12■□□□□ 0.33
TRIM29-215ENST00000530470 KRT28Q7Z3Y7 464 aa17.11■□□□□ 0.33
TRIM29-215ENST00000530470 HIRIP3Q9BW71 556 aaPredicted RBP17.11■□□□□ 0.33
TRIM29-215ENST00000530470 SPATA31A3Q5VYP0 1347 aa17.11■□□□□ 0.33
TRIM29-215ENST00000530470 ARHGEF28Q8N1W1 1705 aaKnown RBP17.1■□□□□ 0.33
TRIM29-215ENST00000530470 MINK1Q8N4C8 1332 aaPredicted RBP17.1■□□□□ 0.33
TRIM29-215ENST00000530470 MARF1Q9Y4F3 1742 aaKnown RBP17.1■□□□□ 0.33
TRIM29-215ENST00000530470 RBM6P78332 1123 aaKnown RBP17.09■□□□□ 0.33
TRIM29-215ENST00000530470 USP21Q9UK80 565 aa17.09■□□□□ 0.33
TRIM29-215ENST00000530470 KIAA1210Q9ULL0 1709 aa17.09■□□□□ 0.33
TRIM29-215ENST00000530470 EIF3AQ14152 1382 aaKnown RBP17.08■□□□□ 0.32
TRIM29-215ENST00000530470 PSME1Q06323 249 aa17.08■□□□□ 0.32
TRIM29-215ENST00000530470 FNBP4Q8N3X1 1017 aaPredicted RBP17.08■□□□□ 0.32
TRIM29-215ENST00000530470 TULP4Q9NRJ4 1543 aa17.07■□□□□ 0.32
TRIM29-215ENST00000530470 TNS3Q68CZ2 1445 aa17.07■□□□□ 0.32
TRIM29-215ENST00000530470 RGS12O14924 1447 aa17.06■□□□□ 0.32
TRIM29-215ENST00000530470 SBNO1A3KN83 1393 aa17.06■□□□□ 0.32
TRIM29-215ENST00000530470 WASLO00401 505 aaPredicted RBP17.06■□□□□ 0.32
TRIM29-215ENST00000530470 PMFBP1Q8TBY8 1022 aa17.06■□□□□ 0.32
TRIM29-215ENST00000530470 TRPC5Q9UL62 973 aaPredicted RBP17.05■□□□□ 0.32
TRIM29-215ENST00000530470 PRR36Q9H6K5 1346 aa17.04■□□□□ 0.32
TRIM29-215ENST00000530470 ATRNO75882 1429 aa17.04■□□□□ 0.32
TRIM29-215ENST00000530470 BCL9LQ86UU0 1499 aa17.03■□□□□ 0.32
TRIM29-215ENST00000530470 ARHGEF10O15013 1369 aa17.02■□□□□ 0.32
TRIM29-215ENST00000530470 LMOD2Q6P5Q4 547 aa17.02■□□□□ 0.32
TRIM29-215ENST00000530470 UPF1Q92900 1129 aaKnown RBP eCLIP17.02■□□□□ 0.32
TRIM29-215ENST00000530470 TRPM3Q9HCF6 1732 aaPredicted RBP17.01■□□□□ 0.31
TRIM29-215ENST00000530470 HAP1P54257 671 aaPredicted RBP17.01■□□□□ 0.31
TRIM29-215ENST00000530470 NBPF1Q3BBV0 1214 aa17.01■□□□□ 0.31
TRIM29-215ENST00000530470 ITSN1Q15811 1721 aa17.01■□□□□ 0.31
TRIM29-215ENST00000530470 ABCA3Q99758 1704 aa17.01■□□□□ 0.31
TRIM29-215ENST00000530470 GPRASP1Q5JY77 1395 aa17.01■□□□□ 0.31
TRIM29-215ENST00000530470 CABLES1Q8TDN4 633 aa17■□□□□ 0.31
TRIM29-215ENST00000530470 TNKS1BP1Q9C0C2 1729 aaKnown RBP17■□□□□ 0.31
TRIM29-215ENST00000530470 ATP7BP35670 1465 aa16.99■□□□□ 0.31
TRIM29-215ENST00000530470 PLEKHG5O94827 1062 aa16.99■□□□□ 0.31
TRIM29-215ENST00000530470 L3MBTL2Q969R5 705 aa16.99■□□□□ 0.31
TRIM29-215ENST00000530470 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
TRIM29-215ENST00000530470 SLIT2O94813 1529 aa16.99■□□□□ 0.31
TRIM29-215ENST00000530470 ALS2Q96Q42 1657 aa16.98■□□□□ 0.31
TRIM29-215ENST00000530470 NGDNQ8NEJ9 315 aaKnown RBP16.98■□□□□ 0.31
TRIM29-215ENST00000530470 NUDT16Q96DE0 195 aaKnown RBP16.98■□□□□ 0.31
TRIM29-215ENST00000530470 UNC5CLQ8IV45 518 aa16.97■□□□□ 0.31
TRIM29-215ENST00000530470 CDK19Q9BWU1 502 aa16.97■□□□□ 0.31
TRIM29-215ENST00000530470 NEUROD1Q13562 356 aa16.96■□□□□ 0.31
TRIM29-215ENST00000530470 PLCH1Q4KWH8 1693 aa16.95■□□□□ 0.3
TRIM29-215ENST00000530470 TOPAZ1Q8N9V7 1692 aa16.95■□□□□ 0.3
TRIM29-215ENST00000530470 GJD4Q96KN9 370 aaPredicted RBP16.95■□□□□ 0.3
TRIM29-215ENST00000530470 NWD2Q9ULI1 1742 aa16.94■□□□□ 0.3
TRIM29-215ENST00000530470 TRPM1Q7Z4N2 1603 aa16.94■□□□□ 0.3
TRIM29-215ENST00000530470 CENPJQ9HC77 1338 aaPredicted RBP16.94■□□□□ 0.3
TRIM29-215ENST00000530470 ATAD2Q6PL18 1390 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms