RNA–Protein interactions for RNA: ENST00000530396.1

NCAPD3-208, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 1,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-208ENST00000530396 SUPT16HQ9Y5B9 1047 aaKnown RBP13.63□□□□□ -0.23
NCAPD3-208ENST00000530396 CLTCL1P53675 1640 aa13.62□□□□□ -0.23
NCAPD3-208ENST00000530396 L3MBTL2Q969R5 705 aa13.62□□□□□ -0.23
NCAPD3-208ENST00000530396 HSPA5P11021 654 aaKnown RBP13.61□□□□□ -0.23
NCAPD3-208ENST00000530396 KIF1BO60333 1816 aa13.6□□□□□ -0.23
NCAPD3-208ENST00000530396 CDK12Q9NYV4 1490 aaPredicted RBP13.6□□□□□ -0.23
NCAPD3-208ENST00000530396 NALCNQ8IZF0 1738 aa13.6□□□□□ -0.23
NCAPD3-208ENST00000530396 NUTM2BA6NNL0 878 aaPredicted RBP13.59□□□□□ -0.23
NCAPD3-208ENST00000530396 NUTM2EB1AL46 878 aaPredicted RBP13.59□□□□□ -0.23
NCAPD3-208ENST00000530396 RXRBP28702 533 aa13.59□□□□□ -0.23
NCAPD3-208ENST00000530396 NUTM2AQ8IVF1 878 aaPredicted RBP13.59□□□□□ -0.23
NCAPD3-208ENST00000530396 LRRC59Q96AG4 307 aaKnown RBP13.59□□□□□ -0.23
NCAPD3-208ENST00000530396 SLC4A1APQ9BWU0 796 aaKnown RBP13.59□□□□□ -0.23
NCAPD3-208ENST00000530396 SPATA31E1Q6ZUB1 1445 aa13.59□□□□□ -0.23
NCAPD3-208ENST00000530396 UPF1Q92900 1129 aaKnown RBP eCLIP13.59□□□□□ -0.23
NCAPD3-208ENST00000530396 WASHC2AQ641Q2 1341 aa13.58□□□□□ -0.24
NCAPD3-208ENST00000530396 HIRIP3Q9BW71 556 aaPredicted RBP13.58□□□□□ -0.24
NCAPD3-208ENST00000530396 PTCH1Q13635 1447 aa13.58□□□□□ -0.24
NCAPD3-208ENST00000530396 AFF2P51816 1311 aa13.57□□□□□ -0.24
NCAPD3-208ENST00000530396 PNPLA6Q8IY17 1366 aa13.57□□□□□ -0.24
NCAPD3-208ENST00000530396 CCDC7Q96M83 1385 aa13.57□□□□□ -0.24
NCAPD3-208ENST00000530396 PRAG1Q86YV5 1406 aa13.56□□□□□ -0.24
NCAPD3-208ENST00000530396 C1orf167Q5SNV9 1468 aa13.56□□□□□ -0.24
NCAPD3-208ENST00000530396 LAMC1P11047 1609 aa13.55□□□□□ -0.24
NCAPD3-208ENST00000530396 VGFO15240 615 aaPredicted RBP13.55□□□□□ -0.24
NCAPD3-208ENST00000530396 RPGRIP1LQ68CZ1 1315 aa13.54□□□□□ -0.24
NCAPD3-208ENST00000530396 DDX17Q92841 729 aaKnown RBP13.54□□□□□ -0.24
NCAPD3-208ENST00000530396 ROBO2Q9HCK4 1378 aa13.53□□□□□ -0.24
NCAPD3-208ENST00000530396 NBPF8Q3BBV2 869 aa13.53□□□□□ -0.24
NCAPD3-208ENST00000530396 C8orf37Q96NL8 207 aa13.53□□□□□ -0.24
NCAPD3-208ENST00000530396 RBM6P78332 1123 aaKnown RBP13.52□□□□□ -0.25
NCAPD3-208ENST00000530396 SOS2Q07890 1332 aaPredicted RBP13.51□□□□□ -0.25
NCAPD3-208ENST00000530396 PPLO60437 1756 aa13.51□□□□□ -0.25
NCAPD3-208ENST00000530396 RGS12O14924 1447 aa13.5□□□□□ -0.25
NCAPD3-208ENST00000530396 CNKSR2Q8WXI2 1034 aa13.5□□□□□ -0.25
NCAPD3-208ENST00000530396 QTRT2Q9H974 415 aaKnown RBP13.5□□□□□ -0.25
NCAPD3-208ENST00000530396 RALGAPBQ86X10 1494 aa13.5□□□□□ -0.25
NCAPD3-208ENST00000530396 ORAI2Q96SN7 254 aa13.49□□□□□ -0.25
NCAPD3-208ENST00000530396 NGLY1Q96IV0 654 aa13.49□□□□□ -0.25
NCAPD3-208ENST00000530396 ADAMTS2O95450 1211 aa13.48□□□□□ -0.25
NCAPD3-208ENST00000530396 CDC42BPGQ6DT37 1551 aa13.48□□□□□ -0.25
NCAPD3-208ENST00000530396 NEFLP07196 543 aa13.47□□□□□ -0.25
NCAPD3-208ENST00000530396 COL22A1Q8NFW1 1626 aaPredicted RBP13.47□□□□□ -0.25
NCAPD3-208ENST00000530396 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.25
NCAPD3-208ENST00000530396 MYT1Q01538 1121 aa13.44□□□□□ -0.26
NCAPD3-208ENST00000530396 FNBP4Q8N3X1 1017 aaPredicted RBP13.44□□□□□ -0.26
NCAPD3-208ENST00000530396 PRKRIP1Q9H875 184 aaPredicted RBP13.44□□□□□ -0.26
NCAPD3-208ENST00000530396 USP21Q9UK80 565 aa13.44□□□□□ -0.26
NCAPD3-208ENST00000530396 TRPC5Q9UL62 973 aaPredicted RBP13.44□□□□□ -0.26
NCAPD3-208ENST00000530396 KIF7Q2M1P5 1343 aa13.44□□□□□ -0.26
NCAPD3-208ENST00000530396 NPHP3Q7Z494 1330 aa13.44□□□□□ -0.26
NCAPD3-208ENST00000530396 ROCK2O75116 1388 aaKnown RBP13.44□□□□□ -0.26
NCAPD3-208ENST00000530396 C11orf95C9JLR9 678 aaPredicted RBP13.44□□□□□ -0.26
NCAPD3-208ENST00000530396 CCDC144AA2RUR9 1427 aa13.44□□□□□ -0.26
NCAPD3-208ENST00000530396 TECPR2O15040 1411 aa13.44□□□□□ -0.26
NCAPD3-208ENST00000530396 MYOM2P54296 1465 aa13.44□□□□□ -0.26
NCAPD3-208ENST00000530396 PXDNQ92626 1479 aa13.43□□□□□ -0.26
NCAPD3-208ENST00000530396 ATAD2Q6PL18 1390 aa13.43□□□□□ -0.26
NCAPD3-208ENST00000530396 USP47Q96K76 1375 aa13.43□□□□□ -0.26
NCAPD3-208ENST00000530396 ESCO1Q5FWF5 840 aa13.43□□□□□ -0.26
NCAPD3-208ENST00000530396 ATRNO75882 1429 aa13.42□□□□□ -0.26
NCAPD3-208ENST00000530396 ADGRF5Q8IZF2 1346 aa13.42□□□□□ -0.26
NCAPD3-208ENST00000530396 ERICH6BQ5W0A0 696 aa13.42□□□□□ -0.26
NCAPD3-208ENST00000530396 LRPPRCP42704 1394 aaKnown RBP13.41□□□□□ -0.26
NCAPD3-208ENST00000530396 KNDC1Q76NI1 1749 aa13.41□□□□□ -0.26
NCAPD3-208ENST00000530396 IFT172Q9UG01 1749 aa13.41□□□□□ -0.26
NCAPD3-208ENST00000530396 FKBP8Q14318 412 aa13.4□□□□□ -0.26
NCAPD3-208ENST00000530396 MARF1Q9Y4F3 1742 aaKnown RBP13.4□□□□□ -0.26
NCAPD3-208ENST00000530396 ABCC11Q96J66 1382 aa13.4□□□□□ -0.26
NCAPD3-208ENST00000530396 TRPM1Q7Z4N2 1603 aa13.4□□□□□ -0.27
NCAPD3-208ENST00000530396 FOXO3O43524 673 aa13.39□□□□□ -0.27
NCAPD3-208ENST00000530396 PIK3C2GO75747 1445 aa13.38□□□□□ -0.27
NCAPD3-208ENST00000530396 KTN1Q86UP2 1357 aaKnown RBP13.38□□□□□ -0.27
NCAPD3-208ENST00000530396 BCL9LQ86UU0 1499 aa13.38□□□□□ -0.27
NCAPD3-208ENST00000530396 HNRNPUQ00839 825 aaKnown RBP eCLIP13.38□□□□□ -0.27
NCAPD3-208ENST00000530396 RGL3Q3MIN7 710 aa13.38□□□□□ -0.27
NCAPD3-208ENST00000530396 WAPLQ7Z5K2 1190 aa13.38□□□□□ -0.27
NCAPD3-208ENST00000530396 STK26Q9P289 416 aa13.38□□□□□ -0.27
NCAPD3-208ENST00000530396 FMN2Q9NZ56 1722 aa13.37□□□□□ -0.27
NCAPD3-208ENST00000530396 KIF1AQ12756 1690 aa13.37□□□□□ -0.27
NCAPD3-208ENST00000530396 XPCQ01831 940 aaPredicted RBP13.36□□□□□ -0.27
NCAPD3-208ENST00000530396 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.36□□□□□ -0.27
NCAPD3-208ENST00000530396 YTHDC2Q9H6S0 1430 aaKnown RBP13.36□□□□□ -0.27
NCAPD3-208ENST00000530396 RNF216Q9NWF9 866 aaPredicted RBP13.36□□□□□ -0.27
NCAPD3-208ENST00000530396 PLEKHH1Q9ULM0 1364 aa13.36□□□□□ -0.27
NCAPD3-208ENST00000530396 ZBED9Q6R2W3 1325 aa13.36□□□□□ -0.27
NCAPD3-208ENST00000530396 NUTM2FA1L443 756 aa13.35□□□□□ -0.27
NCAPD3-208ENST00000530396 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
NCAPD3-208ENST00000530396 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
NCAPD3-208ENST00000530396 SIRT1Q96EB6 747 aa13.34□□□□□ -0.27
NCAPD3-208ENST00000530396 EP400Q96L91 3159 aa13.34□□□□□ -0.27
NCAPD3-208ENST00000530396 GPRASP1Q5JY77 1395 aa13.34□□□□□ -0.27
NCAPD3-208ENST00000530396 SPATA31A3Q5VYP0 1347 aa13.34□□□□□ -0.27
NCAPD3-208ENST00000530396 GJD4Q96KN9 370 aaPredicted RBP13.34□□□□□ -0.27
NCAPD3-208ENST00000530396 SRCAPQ6ZRS2 3230 aa13.33□□□□□ -0.28
NCAPD3-208ENST00000530396 SLIT2O94813 1529 aa13.33□□□□□ -0.28
NCAPD3-208ENST00000530396 CCDC125Q86Z20 511 aa13.33□□□□□ -0.28
NCAPD3-208ENST00000530396 MRS2Q9HD23 443 aa13.33□□□□□ -0.28
NCAPD3-208ENST00000530396 NRXN1Q9ULB1 1477 aa13.32□□□□□ -0.28
NCAPD3-208ENST00000530396 UNC5CLQ8IV45 518 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms