RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 SYNE3Q6ZMZ3 975 aa18.73■□□□□ 0.59
PCDHA4-203ENST00000530339 SMC3Q9UQE7 1217 aa18.73■□□□□ 0.59
PCDHA4-203ENST00000530339 CT47B1P0C2W7 299 aaPredicted RBP18.73■□□□□ 0.59
PCDHA4-203ENST00000530339 ERC2O15083 957 aa18.72■□□□□ 0.59
PCDHA4-203ENST00000530339 IFIT2P09913 472 aaKnown RBP18.72■□□□□ 0.59
PCDHA4-203ENST00000530339 AQRO60306 1485 aaKnown RBP eCLIP18.72■□□□□ 0.59
PCDHA4-203ENST00000530339 BICD2Q8TD16 824 aa18.72■□□□□ 0.59
PCDHA4-203ENST00000530339 MSH5O43196 834 aa18.71■□□□□ 0.59
PCDHA4-203ENST00000530339 CREBRFQ8IUR6 639 aa18.71■□□□□ 0.59
PCDHA4-203ENST00000530339 MBD3O95983 291 aa18.71■□□□□ 0.59
PCDHA4-203ENST00000530339 CCAR2Q8N163 923 aaKnown RBP18.71■□□□□ 0.59
PCDHA4-203ENST00000530339 SUPT6HQ7KZ85 1726 aaKnown RBP18.71■□□□□ 0.59
PCDHA4-203ENST00000530339 TCP11L2Q8N4U5 519 aa18.71■□□□□ 0.59
PCDHA4-203ENST00000530339 TROQ12816 1431 aaPredicted RBP18.71■□□□□ 0.59
PCDHA4-203ENST00000530339 CCDC173Q0VFZ6 552 aa18.71■□□□□ 0.59
PCDHA4-203ENST00000530339 CCDC184Q52MB2 194 aa18.71■□□□□ 0.59
PCDHA4-203ENST00000530339 WDR97A6NE52 1622 aa18.7■□□□□ 0.58
PCDHA4-203ENST00000530339 AKAP17AQ02040 695 aaKnown RBP18.7■□□□□ 0.58
PCDHA4-203ENST00000530339 NBPF8Q3BBV2 869 aa18.7■□□□□ 0.58
PCDHA4-203ENST00000530339 TPM1P09493 284 aa18.7■□□□□ 0.58
PCDHA4-203ENST00000530339 A0A0U1RQG5 324 aaPredicted RBP18.7■□□□□ 0.58
PCDHA4-203ENST00000530339 VPS37CA5D8V6 355 aaPredicted RBP18.7■□□□□ 0.58
PCDHA4-203ENST00000530339 DCAF8L1A6NGE4 600 aa18.7■□□□□ 0.58
PCDHA4-203ENST00000530339 C9orf84Q5VXU9 1444 aa18.7■□□□□ 0.58
PCDHA4-203ENST00000530339 WWC1Q8IX03 1113 aa18.69■□□□□ 0.58
PCDHA4-203ENST00000530339 CAVIN1Q6NZI2 390 aaKnown RBP18.69■□□□□ 0.58
PCDHA4-203ENST00000530339 MRC2Q9UBG0 1479 aa18.68■□□□□ 0.58
PCDHA4-203ENST00000530339 TSR1Q2NL82 804 aaKnown RBP18.68■□□□□ 0.58
PCDHA4-203ENST00000530339 TEX35Q5T0J7 233 aa18.68■□□□□ 0.58
PCDHA4-203ENST00000530339 SASS6Q6UVJ0 657 aa18.68■□□□□ 0.58
PCDHA4-203ENST00000530339 TOMM22Q9NS69 142 aa18.68■□□□□ 0.58
PCDHA4-203ENST00000530339 G3BP1Q13283 466 aaKnown RBP eCLIP18.68■□□□□ 0.58
PCDHA4-203ENST00000530339 HOOK1Q9UJC3 728 aaKnown RBP18.68■□□□□ 0.58
PCDHA4-203ENST00000530339 RNF214Q8ND24 703 aa18.67■□□□□ 0.58
PCDHA4-203ENST00000530339 IFT57Q9NWB7 429 aa18.67■□□□□ 0.58
PCDHA4-203ENST00000530339 TPD52L1Q16890 204 aaPredicted RBP18.67■□□□□ 0.58
PCDHA4-203ENST00000530339 FKBP5Q13451 457 aaPredicted RBP18.66■□□□□ 0.58
PCDHA4-203ENST00000530339 NCBP3Q53F19 620 aaKnown RBP18.66■□□□□ 0.58
PCDHA4-203ENST00000530339 TRIM29Q14134 588 aa18.66■□□□□ 0.58
PCDHA4-203ENST00000530339 RABEP1Q15276 862 aa18.66■□□□□ 0.58
PCDHA4-203ENST00000530339 HOMER1Q86YM7 354 aa18.66■□□□□ 0.58
PCDHA4-203ENST00000530339 NUTM2FA1L443 756 aa18.65■□□□□ 0.58
PCDHA4-203ENST00000530339 TSPYL4Q9UJ04 414 aa18.65■□□□□ 0.58
PCDHA4-203ENST00000530339 MTHFSP49914 203 aa18.65■□□□□ 0.58
PCDHA4-203ENST00000530339 FAM69CQ0P6D2 419 aa18.65■□□□□ 0.58
PCDHA4-203ENST00000530339 BCAR3O75815 825 aa18.65■□□□□ 0.58
PCDHA4-203ENST00000530339 MAP3K1Q13233 1512 aa18.64■□□□□ 0.58
PCDHA4-203ENST00000530339 MCM2P49736 904 aa18.64■□□□□ 0.57
PCDHA4-203ENST00000530339 AMOTL1Q8IY63 956 aa18.64■□□□□ 0.57
PCDHA4-203ENST00000530339 HMGN5P82970 282 aaKnown RBP18.64■□□□□ 0.57
PCDHA4-203ENST00000530339 TOPBP1Q92547 1522 aa18.64■□□□□ 0.57
PCDHA4-203ENST00000530339 GNAI3P08754 354 aa18.63■□□□□ 0.57
PCDHA4-203ENST00000530339 GRPEL1Q9HAV7 217 aa18.63■□□□□ 0.57
PCDHA4-203ENST00000530339 LETM1O95202 739 aaPredicted RBP18.63■□□□□ 0.57
PCDHA4-203ENST00000530339 DNMBPQ6XZF7 1577 aa18.63■□□□□ 0.57
PCDHA4-203ENST00000530339 GCC1Q96CN9 775 aa18.63■□□□□ 0.57
PCDHA4-203ENST00000530339 PES1O00541 588 aaKnown RBP18.62■□□□□ 0.57
PCDHA4-203ENST00000530339 SETQ01105 290 aaPredicted RBP18.62■□□□□ 0.57
PCDHA4-203ENST00000530339 CCDC47Q96A33 483 aaKnown RBP18.62■□□□□ 0.57
PCDHA4-203ENST00000530339 ARGLU1Q9NWB6 273 aaPredicted RBP18.62■□□□□ 0.57
PCDHA4-203ENST00000530339 DAPK1P53355 1430 aa18.62■□□□□ 0.57
PCDHA4-203ENST00000530339 GAS2L2Q8NHY3 880 aa18.62■□□□□ 0.57
PCDHA4-203ENST00000530339 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.62■□□□□ 0.57
PCDHA4-203ENST00000530339 TRDNQ13061 729 aa18.62■□□□□ 0.57
PCDHA4-203ENST00000530339 CCDC73Q6ZRK6 1079 aa18.62■□□□□ 0.57
PCDHA4-203ENST00000530339 NOL10Q9BSC4 688 aaKnown RBP18.62■□□□□ 0.57
PCDHA4-203ENST00000530339 RPGRIP1LQ68CZ1 1315 aa18.62■□□□□ 0.57
PCDHA4-203ENST00000530339 PRPF40AO75400 957 aaKnown RBP18.61■□□□□ 0.57
PCDHA4-203ENST00000530339 ATF3P18847 181 aa18.61■□□□□ 0.57
PCDHA4-203ENST00000530339 CCDC70Q6NSX1 233 aa18.61■□□□□ 0.57
PCDHA4-203ENST00000530339 ANKRD20A12PQ8NF67 263 aa18.61■□□□□ 0.57
PCDHA4-203ENST00000530339 MARCH6O60337 910 aa18.61■□□□□ 0.57
PCDHA4-203ENST00000530339 EIF2S2P20042 333 aaKnown RBP18.61■□□□□ 0.57
PCDHA4-203ENST00000530339 MCM4P33991 863 aa18.61■□□□□ 0.57
PCDHA4-203ENST00000530339 WDR63Q8IWG1 891 aa18.61■□□□□ 0.57
PCDHA4-203ENST00000530339 EXOSC9Q06265 439 aaKnown RBP18.6■□□□□ 0.57
PCDHA4-203ENST00000530339 PSME1Q06323 249 aa18.6■□□□□ 0.57
PCDHA4-203ENST00000530339 CPLX1O14810 134 aa18.6■□□□□ 0.57
PCDHA4-203ENST00000530339 TSPY26PQ9H489 355 aa18.6■□□□□ 0.57
PCDHA4-203ENST00000530339 GGNBP2Q9H3C7 697 aa18.6■□□□□ 0.57
PCDHA4-203ENST00000530339 PRG4Q92954 1404 aaPredicted RBP18.6■□□□□ 0.57
PCDHA4-203ENST00000530339 NEK4P51957 841 aa18.59■□□□□ 0.57
PCDHA4-203ENST00000530339 CIZ1Q9ULV3 898 aaPredicted RBP18.59■□□□□ 0.57
PCDHA4-203ENST00000530339 PSMA5P28066 241 aa18.59■□□□□ 0.57
PCDHA4-203ENST00000530339 CEP89Q96ST8 783 aa18.59■□□□□ 0.57
PCDHA4-203ENST00000530339 CWC22Q9HCG8 908 aaKnown RBP18.59■□□□□ 0.57
PCDHA4-203ENST00000530339 HMOX1P09601 288 aa18.58■□□□□ 0.57
PCDHA4-203ENST00000530339 NBPF1Q3BBV0 1214 aa18.58■□□□□ 0.57
PCDHA4-203ENST00000530339 ESPNB1AK53 854 aa18.58■□□□□ 0.57
PCDHA4-203ENST00000530339 HIP1O00291 1037 aa18.58■□□□□ 0.57
PCDHA4-203ENST00000530339 MNS1Q8NEH6 495 aa18.58■□□□□ 0.56
PCDHA4-203ENST00000530339 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.56
PCDHA4-203ENST00000530339 CCDC30Q5VVM6 783 aa18.58■□□□□ 0.56
PCDHA4-203ENST00000530339 ZNF428Q96B54 188 aa18.58■□□□□ 0.56
PCDHA4-203ENST00000530339 ERBINQ96RT1 1412 aa18.57■□□□□ 0.56
PCDHA4-203ENST00000530339 UBTFL1P0CB47 393 aaPredicted RBP18.57■□□□□ 0.56
PCDHA4-203ENST00000530339 ANKRD30BQ9BXX2 1392 aa18.57■□□□□ 0.56
PCDHA4-203ENST00000530339 IPO7O95373 1038 aaKnown RBP18.57■□□□□ 0.56
PCDHA4-203ENST00000530339 NECTIN2Q92692 538 aa18.57■□□□□ 0.56
PCDHA4-203ENST00000530339 K7ELQ4 463 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms