RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 LAMC1P11047 1609 aa20.4■□□□□ 0.86
CTSB-217ENST00000530296 PRAG1Q86YV5 1406 aa20.4■□□□□ 0.86
CTSB-217ENST00000530296 NALCNQ8IZF0 1738 aa20.4■□□□□ 0.86
CTSB-217ENST00000530296 C1orf167Q5SNV9 1468 aa20.39■□□□□ 0.85
CTSB-217ENST00000530296 IFT172Q9UG01 1749 aa20.36■□□□□ 0.85
CTSB-217ENST00000530296 MYOM2P54296 1465 aa20.36■□□□□ 0.85
CTSB-217ENST00000530296 SOS2Q07890 1332 aaPredicted RBP20.35■□□□□ 0.85
CTSB-217ENST00000530296 RGS12O14924 1447 aa20.34■□□□□ 0.85
CTSB-217ENST00000530296 DCAF11Q8TEB1 546 aa20.33■□□□□ 0.85
CTSB-217ENST00000530296 ADGRF5Q8IZF2 1346 aa20.32■□□□□ 0.84
CTSB-217ENST00000530296 DDX17Q92841 729 aaKnown RBP20.32■□□□□ 0.84
CTSB-217ENST00000530296 TRPC5Q9UL62 973 aaPredicted RBP20.32■□□□□ 0.84
CTSB-217ENST00000530296 ATAD2Q6PL18 1390 aa20.31■□□□□ 0.84
CTSB-217ENST00000530296 ROBO2Q9HCK4 1378 aa20.31■□□□□ 0.84
CTSB-217ENST00000530296 CLSPNQ9HAW4 1339 aa20.3■□□□□ 0.84
CTSB-217ENST00000530296 PIK3C2GO75747 1445 aa20.3■□□□□ 0.84
CTSB-217ENST00000530296 ADAMTS2O95450 1211 aa20.3■□□□□ 0.84
CTSB-217ENST00000530296 USP21Q9UK80 565 aa20.3■□□□□ 0.84
CTSB-217ENST00000530296 NPHP3Q7Z494 1330 aa20.29■□□□□ 0.84
CTSB-217ENST00000530296 NEUROD1Q13562 356 aa20.29■□□□□ 0.84
CTSB-217ENST00000530296 FNBP4Q8N3X1 1017 aaPredicted RBP20.29■□□□□ 0.84
CTSB-217ENST00000530296 NRXN1Q9ULB1 1477 aa20.29■□□□□ 0.84
CTSB-217ENST00000530296 ORAI2Q96SN7 254 aa20.28■□□□□ 0.84
CTSB-217ENST00000530296 SIN3AQ96ST3 1273 aa20.28■□□□□ 0.84
CTSB-217ENST00000530296 LRPPRCP42704 1394 aaKnown RBP20.27■□□□□ 0.84
CTSB-217ENST00000530296 KDM2AQ9Y2K7 1162 aa20.27■□□□□ 0.84
CTSB-217ENST00000530296 COL22A1Q8NFW1 1626 aaPredicted RBP20.27■□□□□ 0.83
CTSB-217ENST00000530296 CDC42BPGQ6DT37 1551 aa20.25■□□□□ 0.83
CTSB-217ENST00000530296 C14orf93Q9H972 538 aaKnown RBP20.25■□□□□ 0.83
CTSB-217ENST00000530296 CCDC125Q86Z20 511 aa20.24■□□□□ 0.83
CTSB-217ENST00000530296 ESCO1Q5FWF5 840 aa20.23■□□□□ 0.83
CTSB-217ENST00000530296 TONSLQ96HA7 1378 aa20.22■□□□□ 0.83
CTSB-217ENST00000530296 ATRNO75882 1429 aa20.22■□□□□ 0.83
CTSB-217ENST00000530296 CCER1Q8TC90 406 aaPredicted RBP20.21■□□□□ 0.83
CTSB-217ENST00000530296 L3MBTL2Q969R5 705 aa20.21■□□□□ 0.83
CTSB-217ENST00000530296 CFAP70Q5T0N1 1121 aa20.19■□□□□ 0.82
CTSB-217ENST00000530296 TECPR2O15040 1411 aa20.19■□□□□ 0.82
CTSB-217ENST00000530296 PXDNQ92626 1479 aa20.18■□□□□ 0.82
CTSB-217ENST00000530296 MARF1Q9Y4F3 1742 aaKnown RBP20.17■□□□□ 0.82
CTSB-217ENST00000530296 ZRANB1Q9UGI0 708 aa20.17■□□□□ 0.82
CTSB-217ENST00000530296 FOXO3O43524 673 aa20.16■□□□□ 0.82
CTSB-217ENST00000530296 TIMELESSQ9UNS1 1208 aa20.16■□□□□ 0.82
CTSB-217ENST00000530296 ABCC11Q96J66 1382 aa20.16■□□□□ 0.82
CTSB-217ENST00000530296 SRCAPQ6ZRS2 3230 aa20.15■□□□□ 0.82
CTSB-217ENST00000530296 KIAA1210Q9ULL0 1709 aa20.14■□□□□ 0.81
CTSB-217ENST00000530296 BCL9LQ86UU0 1499 aa20.14■□□□□ 0.81
CTSB-217ENST00000530296 YTHDC2Q9H6S0 1430 aaKnown RBP20.14■□□□□ 0.81
CTSB-217ENST00000530296 TMEM132EQ6IEE7 984 aa20.14■□□□□ 0.81
CTSB-217ENST00000530296 GJD4Q96KN9 370 aaPredicted RBP20.14■□□□□ 0.81
CTSB-217ENST00000530296 EP400Q96L91 3159 aa20.13■□□□□ 0.81
CTSB-217ENST00000530296 SIRT1Q96EB6 747 aa20.13■□□□□ 0.81
CTSB-217ENST00000530296 KNDC1Q76NI1 1749 aa20.13■□□□□ 0.81
CTSB-217ENST00000530296 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.13■□□□□ 0.81
CTSB-217ENST00000530296 STK26Q9P289 416 aa20.12■□□□□ 0.81
CTSB-217ENST00000530296 KIF1AQ12756 1690 aa20.12■□□□□ 0.81
CTSB-217ENST00000530296 ADGRB1O14514 1584 aa20.1■□□□□ 0.81
CTSB-217ENST00000530296 UNC5CLQ8IV45 518 aa20.1■□□□□ 0.81
CTSB-217ENST00000530296 SPATA31A3Q5VYP0 1347 aa20.09■□□□□ 0.81
CTSB-217ENST00000530296 WAPLQ7Z5K2 1190 aa20.09■□□□□ 0.81
CTSB-217ENST00000530296 PSME1Q06323 249 aa20.08■□□□□ 0.81
CTSB-217ENST00000530296 DLC1Q96QB1 1528 aa20.07■□□□□ 0.8
CTSB-217ENST00000530296 FMN2Q9NZ56 1722 aa20.07■□□□□ 0.8
CTSB-217ENST00000530296 SLIT2O94813 1529 aa20.07■□□□□ 0.8
CTSB-217ENST00000530296 XPCQ01831 940 aaPredicted RBP20.06■□□□□ 0.8
CTSB-217ENST00000530296 HAP1P54257 671 aaPredicted RBP20.05■□□□□ 0.8
CTSB-217ENST00000530296 KRT28Q7Z3Y7 464 aa20.05■□□□□ 0.8
CTSB-217ENST00000530296 POGKQ9P215 609 aa20.05■□□□□ 0.8
CTSB-217ENST00000530296 BLMP54132 1417 aaPredicted RBP20.04■□□□□ 0.8
CTSB-217ENST00000530296 NUTM2FA1L443 756 aa20.04■□□□□ 0.8
CTSB-217ENST00000530296 TRAK1Q9UPV9 953 aa20.04■□□□□ 0.8
CTSB-217ENST00000530296 USP32Q8NFA0 1604 aa20.03■□□□□ 0.8
CTSB-217ENST00000530296 ROCK2O75116 1388 aaKnown RBP20.03■□□□□ 0.8
CTSB-217ENST00000530296 RALGAPBQ86X10 1494 aa20.03■□□□□ 0.8
CTSB-217ENST00000530296 TRPM1Q7Z4N2 1603 aa20.02■□□□□ 0.8
CTSB-217ENST00000530296 SF3B2Q13435 895 aaKnown RBP20.02■□□□□ 0.8
CTSB-217ENST00000530296 TNS3Q68CZ2 1445 aa20.02■□□□□ 0.79
CTSB-217ENST00000530296 SBNO1A3KN83 1393 aa20.01■□□□□ 0.79
CTSB-217ENST00000530296 ARHGEF10O15013 1369 aa20.01■□□□□ 0.79
CTSB-217ENST00000530296 NBPF1Q3BBV0 1214 aa20.01■□□□□ 0.79
CTSB-217ENST00000530296 PRAM1Q96QH2 718 aa20.01■□□□□ 0.79
CTSB-217ENST00000530296 PHF8Q9UPP1 1060 aa20.01■□□□□ 0.79
CTSB-217ENST00000530296 PLEKHH1Q9ULM0 1364 aa20■□□□□ 0.79
CTSB-217ENST00000530296 VPS72Q15906 364 aa20■□□□□ 0.79
CTSB-217ENST00000530296 NWD2Q9ULI1 1742 aa19.99■□□□□ 0.79
CTSB-217ENST00000530296 NBPF8Q3BBV2 869 aa19.99■□□□□ 0.79
CTSB-217ENST00000530296 GLI3P10071 1580 aa19.99■□□□□ 0.79
CTSB-217ENST00000530296 EIF3AQ14152 1382 aaKnown RBP19.97■□□□□ 0.79
CTSB-217ENST00000530296 GPRASP1Q5JY77 1395 aa19.97■□□□□ 0.79
CTSB-217ENST00000530296 ONECUT3O60422 494 aaPredicted RBP19.97■□□□□ 0.79
CTSB-217ENST00000530296 ANKARQ7Z5J8 1434 aa19.96■□□□□ 0.79
CTSB-217ENST00000530296 SEPT12Q8IYM1 358 aa19.95■□□□□ 0.78
CTSB-217ENST00000530296 CARD11Q9BXL7 1154 aa19.95■□□□□ 0.78
CTSB-217ENST00000530296 ARHGEF28Q8N1W1 1705 aaKnown RBP19.95■□□□□ 0.78
CTSB-217ENST00000530296 SAFB2Q14151 953 aaKnown RBP eCLIP19.94■□□□□ 0.78
CTSB-217ENST00000530296 RGPD8O14715 1765 aaPredicted RBP19.93■□□□□ 0.78
CTSB-217ENST00000530296 CCDC9Q9Y3X0 531 aaKnown RBP19.93■□□□□ 0.78
CTSB-217ENST00000530296 BRWD3Q6RI45 1802 aa19.92■□□□□ 0.78
CTSB-217ENST00000530296 PLCH1Q4KWH8 1693 aa19.92■□□□□ 0.78
CTSB-217ENST00000530296 LMOD2Q6P5Q4 547 aa19.92■□□□□ 0.78
CTSB-217ENST00000530296 KRT27Q7Z3Y8 459 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms