RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.57□□□□□ -0.56
CMTM1-214ENST00000530141 L3MBTL2Q969R5 705 aa11.56□□□□□ -0.56
CMTM1-214ENST00000530141 SLAIN2Q9P270 581 aa11.56□□□□□ -0.56
CMTM1-214ENST00000530141 AHDC1Q5TGY3 1603 aaPredicted RBP11.56□□□□□ -0.56
CMTM1-214ENST00000530141 SETBP1Q9Y6X0 1596 aa11.55□□□□□ -0.56
CMTM1-214ENST00000530141 BCANQ96GW7 911 aa11.55□□□□□ -0.56
CMTM1-214ENST00000530141 RTN4Q9NQC3 1192 aaKnown RBP11.55□□□□□ -0.56
CMTM1-214ENST00000530141 SRCAPQ6ZRS2 3230 aa11.54□□□□□ -0.56
CMTM1-214ENST00000530141 CCDC144AA2RUR9 1427 aa11.53□□□□□ -0.56
CMTM1-214ENST00000530141 ARHGAP31Q2M1Z3 1444 aa11.53□□□□□ -0.56
CMTM1-214ENST00000530141 IDI1Q13907 227 aa11.53□□□□□ -0.56
CMTM1-214ENST00000530141 ZNF772Q68DY9 489 aaPredicted RBP11.53□□□□□ -0.56
CMTM1-214ENST00000530141 AFF2P51816 1311 aa11.53□□□□□ -0.56
CMTM1-214ENST00000530141 RXRBP28702 533 aa11.52□□□□□ -0.57
CMTM1-214ENST00000530141 EIF4G2P78344 907 aaKnown RBP eCLIP11.52□□□□□ -0.57
CMTM1-214ENST00000530141 SPATA31A6Q5VVP1 1343 aa11.52□□□□□ -0.57
CMTM1-214ENST00000530141 AMER1Q5JTC6 1135 aaPredicted RBP11.51□□□□□ -0.57
CMTM1-214ENST00000530141 CHADLQ6NUI6 762 aa11.51□□□□□ -0.57
CMTM1-214ENST00000530141 NUTM2DQ5VT03 806 aaPredicted RBP11.5□□□□□ -0.57
CMTM1-214ENST00000530141 C14orf37Q86TY3 774 aa11.5□□□□□ -0.57
CMTM1-214ENST00000530141 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
CMTM1-214ENST00000530141 STAC3Q96MF2 364 aa11.5□□□□□ -0.57
CMTM1-214ENST00000530141 CDK12Q9NYV4 1490 aaPredicted RBP11.5□□□□□ -0.57
CMTM1-214ENST00000530141 DDX17Q92841 729 aaKnown RBP11.49□□□□□ -0.57
CMTM1-214ENST00000530141 ZFYVE9O95405 1425 aa11.48□□□□□ -0.57
CMTM1-214ENST00000530141 NHSL1Q5SYE7 1610 aa11.48□□□□□ -0.57
CMTM1-214ENST00000530141 LMTK2Q8IWU2 1503 aa11.47□□□□□ -0.57
CMTM1-214ENST00000530141 ASXL1Q8IXJ9 1541 aa11.47□□□□□ -0.57
CMTM1-214ENST00000530141 NOS1P29475 1434 aa11.47□□□□□ -0.57
CMTM1-214ENST00000530141 TMEM131LA2VDJ0 1609 aa11.46□□□□□ -0.57
CMTM1-214ENST00000530141 RIMS2Q9UQ26 1411 aa11.46□□□□□ -0.57
CMTM1-214ENST00000530141 BRINP3Q76B58 766 aa11.46□□□□□ -0.57
CMTM1-214ENST00000530141 C8orf37Q96NL8 207 aa11.46□□□□□ -0.57
CMTM1-214ENST00000530141 PLEKHG1Q9ULL1 1385 aa11.45□□□□□ -0.58
CMTM1-214ENST00000530141 TRPM2O94759 1503 aa11.45□□□□□ -0.58
CMTM1-214ENST00000530141 RALGAPBQ86X10 1494 aa11.44□□□□□ -0.58
CMTM1-214ENST00000530141 ADAMTS13Q76LX8 1427 aa11.44□□□□□ -0.58
CMTM1-214ENST00000530141 PTPRUQ92729 1446 aa11.44□□□□□ -0.58
CMTM1-214ENST00000530141 HSPA5P11021 654 aaKnown RBP11.44□□□□□ -0.58
CMTM1-214ENST00000530141 CREBZFQ9NS37 354 aa11.44□□□□□ -0.58
CMTM1-214ENST00000530141 CENPBP07199 599 aaPredicted RBP11.43□□□□□ -0.58
CMTM1-214ENST00000530141 NBPF8Q3BBV2 869 aa11.43□□□□□ -0.58
CMTM1-214ENST00000530141 ADAMTS2O95450 1211 aa11.42□□□□□ -0.58
CMTM1-214ENST00000530141 MIER1Q8N108 512 aa11.42□□□□□ -0.58
CMTM1-214ENST00000530141 QTRT2Q9H974 415 aaKnown RBP11.42□□□□□ -0.58
CMTM1-214ENST00000530141 NALCNQ8IZF0 1738 aa11.42□□□□□ -0.58
CMTM1-214ENST00000530141 PNPLA6Q8IY17 1366 aa11.41□□□□□ -0.58
CMTM1-214ENST00000530141 XRN1Q8IZH2 1706 aaKnown RBP11.41□□□□□ -0.58
CMTM1-214ENST00000530141 CHGAP10645 457 aaKnown RBP11.41□□□□□ -0.58
CMTM1-214ENST00000530141 ATF3P18847 181 aa11.41□□□□□ -0.58
CMTM1-214ENST00000530141 DCAF11Q8TEB1 546 aa11.41□□□□□ -0.58
CMTM1-214ENST00000530141 MST1RQ04912 1400 aa11.41□□□□□ -0.58
CMTM1-214ENST00000530141 E9PCH4 1651 aa11.4□□□□□ -0.58
CMTM1-214ENST00000530141 NRXN3Q9Y4C0 1643 aa11.4□□□□□ -0.58
CMTM1-214ENST00000530141 HAX1O00165 279 aa11.4□□□□□ -0.58
CMTM1-214ENST00000530141 RBM6P78332 1123 aaKnown RBP11.4□□□□□ -0.58
CMTM1-214ENST00000530141 DDX10Q13206 875 aaKnown RBP11.39□□□□□ -0.59
CMTM1-214ENST00000530141 SPHKAPQ2M3C7 1700 aa11.39□□□□□ -0.59
CMTM1-214ENST00000530141 ZNF326Q5BKZ1 582 aaKnown RBP11.39□□□□□ -0.59
CMTM1-214ENST00000530141 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
CMTM1-214ENST00000530141 PRAG1Q86YV5 1406 aa11.39□□□□□ -0.59
CMTM1-214ENST00000530141 FARP1Q9Y4F1 1045 aaPredicted RBP11.39□□□□□ -0.59
CMTM1-214ENST00000530141 ATAD2Q6PL18 1390 aa11.39□□□□□ -0.59
CMTM1-214ENST00000530141 USP47Q96K76 1375 aa11.39□□□□□ -0.59
CMTM1-214ENST00000530141 SPATA31E1Q6ZUB1 1445 aa11.38□□□□□ -0.59
CMTM1-214ENST00000530141 ANP32CO43423 234 aa11.38□□□□□ -0.59
CMTM1-214ENST00000530141 CARD11Q9BXL7 1154 aa11.38□□□□□ -0.59
CMTM1-214ENST00000530141 EP400Q96L91 3159 aa11.38□□□□□ -0.59
CMTM1-214ENST00000530141 C19orf44Q9H6X5 657 aa11.37□□□□□ -0.59
CMTM1-214ENST00000530141 KDM2AQ9Y2K7 1162 aa11.37□□□□□ -0.59
CMTM1-214ENST00000530141 ROCK2O75116 1388 aaKnown RBP11.37□□□□□ -0.59
CMTM1-214ENST00000530141 LAMC1P11047 1609 aa11.36□□□□□ -0.59
CMTM1-214ENST00000530141 ZRANB1Q9UGI0 708 aa11.36□□□□□ -0.59
CMTM1-214ENST00000530141 AMOTL2Q9Y2J4 779 aa11.36□□□□□ -0.59
CMTM1-214ENST00000530141 GPRASP1Q5JY77 1395 aa11.36□□□□□ -0.59
CMTM1-214ENST00000530141 NCOA3Q9Y6Q9 1424 aa11.35□□□□□ -0.59
CMTM1-214ENST00000530141 RGL3Q3MIN7 710 aa11.35□□□□□ -0.59
CMTM1-214ENST00000530141 NGLY1Q96IV0 654 aa11.35□□□□□ -0.59
CMTM1-214ENST00000530141 HIRIP3Q9BW71 556 aaPredicted RBP11.35□□□□□ -0.59
CMTM1-214ENST00000530141 TBX22Q9Y458 520 aa11.35□□□□□ -0.59
CMTM1-214ENST00000530141 CCDC7Q96M83 1385 aa11.35□□□□□ -0.59
CMTM1-214ENST00000530141 CCER2I3L3R5 266 aa11.34□□□□□ -0.59
CMTM1-214ENST00000530141 BRWD3Q6RI45 1802 aa11.34□□□□□ -0.59
CMTM1-214ENST00000530141 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
CMTM1-214ENST00000530141 SLC52A1Q9NWF4 448 aa11.33□□□□□ -0.6
CMTM1-214ENST00000530141 USP21Q9UK80 565 aa11.33□□□□□ -0.6
CMTM1-214ENST00000530141 CLTCL1P53675 1640 aa11.33□□□□□ -0.6
CMTM1-214ENST00000530141 DCCP43146 1447 aa11.33□□□□□ -0.6
CMTM1-214ENST00000530141 WASHC2AQ641Q2 1341 aa11.33□□□□□ -0.6
CMTM1-214ENST00000530141 RPGRIP1LQ68CZ1 1315 aa11.33□□□□□ -0.6
CMTM1-214ENST00000530141 MYOM2P54296 1465 aa11.32□□□□□ -0.6
CMTM1-214ENST00000530141 TRPM1Q7Z4N2 1603 aa11.32□□□□□ -0.6
CMTM1-214ENST00000530141 ATRNO75882 1429 aa11.32□□□□□ -0.6
CMTM1-214ENST00000530141 MARF1Q9Y4F3 1742 aaKnown RBP11.32□□□□□ -0.6
CMTM1-214ENST00000530141 DEFB132Q7Z7B7 95 aa11.31□□□□□ -0.6
CMTM1-214ENST00000530141 LRRC59Q96AG4 307 aaKnown RBP11.31□□□□□ -0.6
CMTM1-214ENST00000530141 FBXO3Q9UK99 471 aa11.31□□□□□ -0.6
CMTM1-214ENST00000530141 LRP5O75197 1615 aa11.31□□□□□ -0.6
CMTM1-214ENST00000530141 METP08581 1390 aa11.3□□□□□ -0.6
CMTM1-214ENST00000530141 ADGRL3Q9HAR2 1447 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms