RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 PRR20BP86481 221 aa8.13□□□□□ -1.11
CTR9-205ENST00000529898 PRR20AP86496 221 aa8.13□□□□□ -1.11
CTR9-205ENST00000529898 TTLL12Q14166 644 aaPredicted RBP8.13□□□□□ -1.11
CTR9-205ENST00000529898 NUTM1Q86Y26 1132 aa8.13□□□□□ -1.11
CTR9-205ENST00000529898 SPIRE2Q8WWL2 714 aa8.13□□□□□ -1.11
CTR9-205ENST00000529898 DXOO77932 396 aaKnown RBP8.12□□□□□ -1.11
CTR9-205ENST00000529898 BCANQ96GW7 911 aa8.12□□□□□ -1.11
CTR9-205ENST00000529898 PRDM9Q9NQV7 894 aa8.12□□□□□ -1.11
CTR9-205ENST00000529898 GJA5P36382 358 aa8.11□□□□□ -1.11
CTR9-205ENST00000529898 PDZRN3Q9UPQ7 1066 aa8.11□□□□□ -1.11
CTR9-205ENST00000529898 FCF1Q9Y324 198 aaKnown RBP8.11□□□□□ -1.11
CTR9-205ENST00000529898 LCE2BO14633 110 aa8.1□□□□□ -1.11
CTR9-205ENST00000529898 GDF9O60383 454 aa8.1□□□□□ -1.11
CTR9-205ENST00000529898 PCDHGC3Q9UN70 934 aa8.1□□□□□ -1.11
CTR9-205ENST00000529898 FDX1P10109 184 aa8.09□□□□□ -1.11
CTR9-205ENST00000529898 MS4A1P11836 297 aa8.09□□□□□ -1.11
CTR9-205ENST00000529898 GUCA2AQ02747 115 aa8.09□□□□□ -1.11
CTR9-205ENST00000529898 PDE4DQ08499 809 aa8.09□□□□□ -1.11
CTR9-205ENST00000529898 DIXDC1Q155Q3 683 aa8.09□□□□□ -1.11
CTR9-205ENST00000529898 ZNF697Q5TEC3 545 aa8.09□□□□□ -1.11
CTR9-205ENST00000529898 BEGAINQ9BUH8 593 aa8.09□□□□□ -1.11
CTR9-205ENST00000529898 SLC24A3Q9HC58 644 aa8.09□□□□□ -1.11
CTR9-205ENST00000529898 Q6ZNB5 142 aa8.08□□□□□ -1.12
CTR9-205ENST00000529898 RETREG3Q86VR2 466 aa8.08□□□□□ -1.12
CTR9-205ENST00000529898 MOXD2PA6NHM9 499 aa8.07□□□□□ -1.12
CTR9-205ENST00000529898 CD2BP2O95400 341 aaKnown RBP8.07□□□□□ -1.12
CTR9-205ENST00000529898 SYMPKQ92797 1274 aaKnown RBP8.06□□□□□ -1.12
CTR9-205ENST00000529898 PKD2L1Q9P0L9 805 aa8.06□□□□□ -1.12
CTR9-205ENST00000529898 JUNDP17535 347 aa8.05□□□□□ -1.12
CTR9-205ENST00000529898 NDUFV2P19404 249 aa8.05□□□□□ -1.12
CTR9-205ENST00000529898 TRAF7Q6Q0C0 670 aa8.05□□□□□ -1.12
CTR9-205ENST00000529898 TBC1D2Q9BYX2 928 aa8.05□□□□□ -1.12
CTR9-205ENST00000529898 SPDYE5A6NIY4 337 aa8.04□□□□□ -1.12
CTR9-205ENST00000529898 SPTLC1O15269 473 aa8.04□□□□□ -1.12
CTR9-205ENST00000529898 RSBN1LQ6PCB5 846 aaPredicted RBP8.04□□□□□ -1.12
CTR9-205ENST00000529898 DGAT1O75907 488 aa8.03□□□□□ -1.12
CTR9-205ENST00000529898 TUSC1Q2TAM9 212 aa8.03□□□□□ -1.12
CTR9-205ENST00000529898 DESI1Q6ICB0 168 aa8.03□□□□□ -1.12
CTR9-205ENST00000529898 ZBTB24O43167 697 aaPredicted RBP8.02□□□□□ -1.13
CTR9-205ENST00000529898 C6orf229H3BNL8 230 aa8.01□□□□□ -1.13
CTR9-205ENST00000529898 TOR4AQ9NXH8 423 aa8.01□□□□□ -1.13
CTR9-205ENST00000529898 TRIM32Q13049 653 aa8□□□□□ -1.13
CTR9-205ENST00000529898 MTMR2Q13614 643 aa8□□□□□ -1.13
CTR9-205ENST00000529898 PRPF38BQ5VTL8 546 aaKnown RBP8□□□□□ -1.13
CTR9-205ENST00000529898 WNT7AO00755 349 aa7.99□□□□□ -1.13
CTR9-205ENST00000529898 RIC3Q7Z5B4 369 aa7.99□□□□□ -1.13
CTR9-205ENST00000529898 PCDHB15Q9Y5E8 787 aa7.99□□□□□ -1.13
CTR9-205ENST00000529898 TNFRSF10AO00220 468 aa7.98□□□□□ -1.13
CTR9-205ENST00000529898 PTPRNQ16849 979 aa7.98□□□□□ -1.13
CTR9-205ENST00000529898 MYSM1Q5VVJ2 828 aa7.98□□□□□ -1.13
CTR9-205ENST00000529898 PRR7Q8TB68 274 aa7.98□□□□□ -1.13
CTR9-205ENST00000529898 NUDT12Q9BQG2 462 aa7.98□□□□□ -1.13
CTR9-205ENST00000529898 WNT7BP56706 349 aa7.97□□□□□ -1.13
CTR9-205ENST00000529898 MYT1Q01538 1121 aa7.97□□□□□ -1.13
CTR9-205ENST00000529898 PTCRAQ6ISU1 281 aaPredicted RBP7.97□□□□□ -1.13
CTR9-205ENST00000529898 EVA1BQ9NVM1 165 aa7.97□□□□□ -1.13
CTR9-205ENST00000529898 AVPP01185 164 aa7.96□□□□□ -1.14
CTR9-205ENST00000529898 CCNYL3P0C7X3 344 aa7.96□□□□□ -1.14
CTR9-205ENST00000529898 HRCP23327 699 aa7.96□□□□□ -1.14
CTR9-205ENST00000529898 FOXC1Q12948 553 aa7.96□□□□□ -1.14
CTR9-205ENST00000529898 ZBTB3Q9H5J0 574 aa7.96□□□□□ -1.14
CTR9-205ENST00000529898 SKOR1P84550 965 aa7.95□□□□□ -1.14
CTR9-205ENST00000529898 PKDCCQ504Y2 493 aa7.95□□□□□ -1.14
CTR9-205ENST00000529898 LYPD8Q6UX82 237 aa7.95□□□□□ -1.14
CTR9-205ENST00000529898 CCDC24Q8N4L8 307 aa7.95□□□□□ -1.14
CTR9-205ENST00000529898 RSPH6AQ9H0K4 717 aa7.95□□□□□ -1.14
CTR9-205ENST00000529898 LIMD1Q9UGP4 676 aa7.95□□□□□ -1.14
CTR9-205ENST00000529898 LILRB3O75022 631 aa7.94□□□□□ -1.14
CTR9-205ENST00000529898 CRIPAKQ8N1N5 446 aa7.94□□□□□ -1.14
CTR9-205ENST00000529898 FAM187AA6NFU0 413 aa7.93□□□□□ -1.14
CTR9-205ENST00000529898 CFAP99D6REC4 459 aa7.93□□□□□ -1.14
CTR9-205ENST00000529898 KCNH2Q12809 1159 aa7.93□□□□□ -1.14
CTR9-205ENST00000529898 CYP4X1Q8N118 509 aa7.93□□□□□ -1.14
CTR9-205ENST00000529898 SNIP1Q8TAD8 396 aaKnown RBP7.93□□□□□ -1.14
CTR9-205ENST00000529898 RC3H1Q5TC82 1133 aaKnown RBP7.92□□□□□ -1.14
CTR9-205ENST00000529898 MRGPRX2Q96LB1 330 aa7.92□□□□□ -1.14
CTR9-205ENST00000529898 KDM4CQ9H3R0 1056 aa7.92□□□□□ -1.14
CTR9-205ENST00000529898 SMCPP49901 116 aaPredicted RBP7.91□□□□□ -1.14
CTR9-205ENST00000529898 QPCTQ16769 361 aa7.91□□□□□ -1.14
CTR9-205ENST00000529898 CABLES1Q8TDN4 633 aa7.91□□□□□ -1.14
CTR9-205ENST00000529898 SIAH2O43255 324 aa7.9□□□□□ -1.14
CTR9-205ENST00000529898 F12P00748 615 aaPredicted RBP7.9□□□□□ -1.14
CTR9-205ENST00000529898 CLK2P49760 499 aaKnown RBP7.9□□□□□ -1.14
CTR9-205ENST00000529898 UNC93B1Q9H1C4 597 aa7.9□□□□□ -1.14
CTR9-205ENST00000529898 GPBP1L1Q9HC44 474 aaPredicted RBP7.9□□□□□ -1.14
CTR9-205ENST00000529898 AAASQ9NRG9 546 aa7.9□□□□□ -1.14
CTR9-205ENST00000529898 SMPD1P17405 629 aa7.89□□□□□ -1.15
CTR9-205ENST00000529898 SH3BP2P78314 561 aa7.89□□□□□ -1.15
CTR9-205ENST00000529898 SKIV2LQ15477 1246 aaKnown RBP7.89□□□□□ -1.15
CTR9-205ENST00000529898 CTC1Q2NKJ3 1217 aa7.89□□□□□ -1.15
CTR9-205ENST00000529898 DDRGK1Q96HY6 314 aa7.89□□□□□ -1.15
CTR9-205ENST00000529898 TTC24A2A3L6 582 aaPredicted RBP7.88□□□□□ -1.15
CTR9-205ENST00000529898 SH3D19Q5HYK7 790 aa7.88□□□□□ -1.15
CTR9-205ENST00000529898 FAM117AQ9C073 453 aa7.88□□□□□ -1.15
CTR9-205ENST00000529898 PLEKHG3A1L390 1219 aa7.87□□□□□ -1.15
CTR9-205ENST00000529898 RTL5Q5HYW3 569 aaPredicted RBP7.87□□□□□ -1.15
CTR9-205ENST00000529898 MPNDQ8N594 471 aa7.87□□□□□ -1.15
CTR9-205ENST00000529898 CSPP1Q1MSJ5 1256 aa7.86□□□□□ -1.15
CTR9-205ENST00000529898 PPP2R2DQ66LE6 453 aa7.86□□□□□ -1.15
CTR9-205ENST00000529898 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms