RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 SENP2Q9HC62 589 aa4.32□□□□□ -1.72
FDFT1-216ENST00000529521 TSHZ2Q9NRE2 1034 aa4.32□□□□□ -1.72
FDFT1-216ENST00000529521 RCCD1A6NED2 376 aa4.31□□□□□ -1.72
FDFT1-216ENST00000529521 HRCP23327 699 aa4.31□□□□□ -1.72
FDFT1-216ENST00000529521 RBM46Q8TBY0 533 aaKnown RBP4.31□□□□□ -1.72
FDFT1-216ENST00000529521 ADGRG1Q9Y653 693 aa4.31□□□□□ -1.72
FDFT1-216ENST00000529521 NISCHQ9Y2I1 1504 aa4.31□□□□□ -1.72
FDFT1-216ENST00000529521 FAM161AQ3B820 660 aa4.3□□□□□ -1.72
FDFT1-216ENST00000529521 J3QL48 77 aa4.29□□□□□ -1.72
FDFT1-216ENST00000529521 WNT7AO00755 349 aa4.29□□□□□ -1.72
FDFT1-216ENST00000529521 FAM160A2Q8N612 972 aaPredicted RBP4.29□□□□□ -1.72
FDFT1-216ENST00000529521 SNIP1Q8TAD8 396 aaKnown RBP4.29□□□□□ -1.72
FDFT1-216ENST00000529521 SLC16A10Q8TF71 515 aa4.29□□□□□ -1.72
FDFT1-216ENST00000529521 THAP11Q96EK4 314 aa4.29□□□□□ -1.72
FDFT1-216ENST00000529521 PTGDRQ13258 359 aa4.28□□□□□ -1.72
FDFT1-216ENST00000529521 HPS1Q92902 700 aa4.28□□□□□ -1.72
FDFT1-216ENST00000529521 KIFC2Q96AC6 838 aa4.28□□□□□ -1.72
FDFT1-216ENST00000529521 NXF1Q9UBU9 619 aaKnown RBP4.28□□□□□ -1.72
FDFT1-216ENST00000529521 KDM2AQ9Y2K7 1162 aa4.28□□□□□ -1.72
FDFT1-216ENST00000529521 SUPT5HO00267 1087 aaKnown RBP4.27□□□□□ -1.73
FDFT1-216ENST00000529521 IRF7Q92985 503 aa4.27□□□□□ -1.73
FDFT1-216ENST00000529521 PRDM9Q9NQV7 894 aa4.27□□□□□ -1.73
FDFT1-216ENST00000529521 ERBB4Q15303 1308 aa4.26□□□□□ -1.73
FDFT1-216ENST00000529521 VEGFBP49765 207 aa4.26□□□□□ -1.73
FDFT1-216ENST00000529521 MORN1Q5T089 497 aa4.26□□□□□ -1.73
FDFT1-216ENST00000529521 MRGPRX2Q96LB1 330 aa4.26□□□□□ -1.73
FDFT1-216ENST00000529521 CHMP4AQ9BY43 222 aa4.26□□□□□ -1.73
FDFT1-216ENST00000529521 SHROOM4Q9ULL8 1493 aa4.25□□□□□ -1.73
FDFT1-216ENST00000529521 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.25□□□□□ -1.73
FDFT1-216ENST00000529521 ZBTB24O43167 697 aaPredicted RBP4.25□□□□□ -1.73
FDFT1-216ENST00000529521 NEFLP07196 543 aa4.25□□□□□ -1.73
FDFT1-216ENST00000529521 UBTFP17480 764 aaKnown RBP4.25□□□□□ -1.73
FDFT1-216ENST00000529521 BRD2P25440 801 aaKnown RBP4.25□□□□□ -1.73
FDFT1-216ENST00000529521 PDE4CQ08493 712 aa4.25□□□□□ -1.73
FDFT1-216ENST00000529521 NPAS3Q8IXF0 933 aa4.25□□□□□ -1.73
FDFT1-216ENST00000529521 H3BM21 787 aa4.24□□□□□ -1.73
FDFT1-216ENST00000529521 FMNL1O95466 1100 aaPredicted RBP4.24□□□□□ -1.73
FDFT1-216ENST00000529521 MLLT3P42568 568 aaPredicted RBP4.24□□□□□ -1.73
FDFT1-216ENST00000529521 GSK3AP49840 483 aa4.24□□□□□ -1.73
FDFT1-216ENST00000529521 TRIM32Q13049 653 aa4.24□□□□□ -1.73
FDFT1-216ENST00000529521 KCTD17Q8N5Z5 321 aa4.24□□□□□ -1.73
FDFT1-216ENST00000529521 SLC27A5Q9Y2P5 690 aa4.24□□□□□ -1.73
FDFT1-216ENST00000529521 FUT2Q10981 343 aa4.23□□□□□ -1.73
FDFT1-216ENST00000529521 TAF7LQ5H9L4 462 aa4.23□□□□□ -1.73
FDFT1-216ENST00000529521 BRICD5Q6PL45 260 aa4.23□□□□□ -1.73
FDFT1-216ENST00000529521 PXYLP1Q8TE99 480 aa4.23□□□□□ -1.73
FDFT1-216ENST00000529521 PKNOX2Q96KN3 472 aa4.23□□□□□ -1.73
FDFT1-216ENST00000529521 WDR70Q9NW82 654 aa4.23□□□□□ -1.73
FDFT1-216ENST00000529521 BMP1P13497 986 aa4.22□□□□□ -1.73
FDFT1-216ENST00000529521 KCNMA1Q12791 1236 aa4.22□□□□□ -1.73
FDFT1-216ENST00000529521 RSPH4AQ5TD94 716 aa4.22□□□□□ -1.73
FDFT1-216ENST00000529521 TRIM46Q7Z4K8 759 aa4.22□□□□□ -1.73
FDFT1-216ENST00000529521 CDK11AQ9UQ88 783 aaPredicted RBP4.22□□□□□ -1.73
FDFT1-216ENST00000529521 SALL2Q9Y467 1007 aaPredicted RBP4.22□□□□□ -1.73
FDFT1-216ENST00000529521 CDK11BP21127 795 aaKnown RBP4.21□□□□□ -1.74
FDFT1-216ENST00000529521 FECHP22830 423 aa4.21□□□□□ -1.74
FDFT1-216ENST00000529521 ATP6V1AP38606 617 aa4.21□□□□□ -1.74
FDFT1-216ENST00000529521 MSS51Q4VC12 460 aa4.21□□□□□ -1.74
FDFT1-216ENST00000529521 REPIN1Q9BWE0 567 aaKnown RBP4.21□□□□□ -1.74
FDFT1-216ENST00000529521 SKOR1P84550 965 aa4.2□□□□□ -1.74
FDFT1-216ENST00000529521 RNF19BQ6ZMZ0 732 aa4.2□□□□□ -1.74
FDFT1-216ENST00000529521 NUTM2FA1L443 756 aa4.19□□□□□ -1.74
FDFT1-216ENST00000529521 OATP04181 439 aa4.19□□□□□ -1.74
FDFT1-216ENST00000529521 RC3H1Q5TC82 1133 aaKnown RBP4.19□□□□□ -1.74
FDFT1-216ENST00000529521 METTL3Q86U44 580 aaKnown RBP4.19□□□□□ -1.74
FDFT1-216ENST00000529521 RDH13Q8NBN7 331 aa4.19□□□□□ -1.74
FDFT1-216ENST00000529521 ALDH1A1P00352 501 aa4.18□□□□□ -1.74
FDFT1-216ENST00000529521 HMGB1P09429 215 aaKnown RBP4.18□□□□□ -1.74
FDFT1-216ENST00000529521 MMP16P51512 607 aa4.18□□□□□ -1.74
FDFT1-216ENST00000529521 DHX37Q8IY37 1157 aaKnown RBP4.18□□□□□ -1.74
FDFT1-216ENST00000529521 DDX11L8A8MPP1 907 aa4.17□□□□□ -1.74
FDFT1-216ENST00000529521 CAPN5O15484 640 aaPredicted RBP4.17□□□□□ -1.74
FDFT1-216ENST00000529521 FCHSD2O94868 740 aa4.17□□□□□ -1.74
FDFT1-216ENST00000529521 VSIG8P0DPA2 414 aa4.17□□□□□ -1.74
FDFT1-216ENST00000529521 HSP90B1P14625 803 aaKnown RBP4.17□□□□□ -1.74
FDFT1-216ENST00000529521 GCGRP47871 477 aa4.17□□□□□ -1.74
FDFT1-216ENST00000529521 IGSF3O75054 1194 aa4.16□□□□□ -1.74
FDFT1-216ENST00000529521 WNT7BP56706 349 aa4.16□□□□□ -1.74
FDFT1-216ENST00000529521 TMEM151AQ8N4L1 468 aa4.16□□□□□ -1.74
FDFT1-216ENST00000529521 ZFP42Q96MM3 310 aa4.16□□□□□ -1.74
FDFT1-216ENST00000529521 SIAH2O43255 324 aa4.15□□□□□ -1.75
FDFT1-216ENST00000529521 DXOO77932 396 aaKnown RBP4.15□□□□□ -1.75
FDFT1-216ENST00000529521 GDF11O95390 407 aa4.15□□□□□ -1.75
FDFT1-216ENST00000529521 CENPBP07199 599 aaPredicted RBP4.15□□□□□ -1.75
FDFT1-216ENST00000529521 RASSF7Q02833 373 aa4.15□□□□□ -1.75
FDFT1-216ENST00000529521 P3H3Q8IVL6 736 aa4.15□□□□□ -1.75
FDFT1-216ENST00000529521 NLRP7Q8WX94 980 aa4.15□□□□□ -1.75
FDFT1-216ENST00000529521 ARHGEF1Q92888 912 aaKnown RBP4.14□□□□□ -1.75
FDFT1-216ENST00000529521 SOBPA7XYQ1 873 aa4.13□□□□□ -1.75
FDFT1-216ENST00000529521 FGD1P98174 961 aa4.13□□□□□ -1.75
FDFT1-216ENST00000529521 Q3C1V9 767 aa4.13□□□□□ -1.75
FDFT1-216ENST00000529521 XP32Q5T750 250 aa4.13□□□□□ -1.75
FDFT1-216ENST00000529521 CCDC24Q8N4L8 307 aa4.13□□□□□ -1.75
FDFT1-216ENST00000529521 PUS7Q96PZ0 661 aaKnown RBP4.13□□□□□ -1.75
FDFT1-216ENST00000529521 USB1Q9BQ65 265 aaKnown RBP4.13□□□□□ -1.75
FDFT1-216ENST00000529521 WASF2Q9Y6W5 498 aa4.12□□□□□ -1.75
FDFT1-216ENST00000529521 HIC1Q14526 733 aa4.11□□□□□ -1.75
FDFT1-216ENST00000529521 GRIPAP1Q4V328 841 aa4.11□□□□□ -1.75
FDFT1-216ENST00000529521 SULF1Q8IWU6 871 aa4.11□□□□□ -1.75
FDFT1-216ENST00000529521 EHBP1Q8NDI1 1231 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms