RNA–Protein interactions for RNA: ENST00000529520.5

GPATCH4-214, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-214ENST00000529520 NUTM2FA1L443 756 aa12.22□□□□□ -0.45
GPATCH4-214ENST00000529520 KNDC1Q76NI1 1749 aa12.21□□□□□ -0.45
GPATCH4-214ENST00000529520 ADAMTS2O95450 1211 aa12.21□□□□□ -0.45
GPATCH4-214ENST00000529520 C8orf37Q96NL8 207 aa12.21□□□□□ -0.45
GPATCH4-214ENST00000529520 RXRBP28702 533 aa12.2□□□□□ -0.46
GPATCH4-214ENST00000529520 ESCO1Q5FWF5 840 aa12.2□□□□□ -0.46
GPATCH4-214ENST00000529520 PIK3C2GO75747 1445 aa12.2□□□□□ -0.46
GPATCH4-214ENST00000529520 LRPPRCP42704 1394 aaKnown RBP12.19□□□□□ -0.46
GPATCH4-214ENST00000529520 ANKRD30BQ9BXX2 1392 aa12.19□□□□□ -0.46
GPATCH4-214ENST00000529520 CDC42BPGQ6DT37 1551 aa12.19□□□□□ -0.46
GPATCH4-214ENST00000529520 XPCQ01831 940 aaPredicted RBP12.19□□□□□ -0.46
GPATCH4-214ENST00000529520 UPF1Q92900 1129 aaKnown RBP eCLIP12.19□□□□□ -0.46
GPATCH4-214ENST00000529520 QTRT2Q9H974 415 aaKnown RBP12.19□□□□□ -0.46
GPATCH4-214ENST00000529520 TECPR2O15040 1411 aa12.19□□□□□ -0.46
GPATCH4-214ENST00000529520 RAB3GAP2Q9H2M9 1393 aa12.18□□□□□ -0.46
GPATCH4-214ENST00000529520 FMN2Q9NZ56 1722 aa12.18□□□□□ -0.46
GPATCH4-214ENST00000529520 FOXO3O43524 673 aa12.18□□□□□ -0.46
GPATCH4-214ENST00000529520 CFAP70Q5T0N1 1121 aa12.18□□□□□ -0.46
GPATCH4-214ENST00000529520 COL22A1Q8NFW1 1626 aaPredicted RBP12.18□□□□□ -0.46
GPATCH4-214ENST00000529520 ABCC11Q96J66 1382 aa12.18□□□□□ -0.46
GPATCH4-214ENST00000529520 MARF1Q9Y4F3 1742 aaKnown RBP12.17□□□□□ -0.46
GPATCH4-214ENST00000529520 PXDNQ92626 1479 aa12.17□□□□□ -0.46
GPATCH4-214ENST00000529520 NGLY1Q96IV0 654 aa12.17□□□□□ -0.46
GPATCH4-214ENST00000529520 C14orf93Q9H972 538 aaKnown RBP12.17□□□□□ -0.46
GPATCH4-214ENST00000529520 YTHDC2Q9H6S0 1430 aaKnown RBP12.17□□□□□ -0.46
GPATCH4-214ENST00000529520 NRXN1Q9ULB1 1477 aa12.15□□□□□ -0.46
GPATCH4-214ENST00000529520 RGS12O14924 1447 aa12.14□□□□□ -0.47
GPATCH4-214ENST00000529520 RBM6P78332 1123 aaKnown RBP12.14□□□□□ -0.47
GPATCH4-214ENST00000529520 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
GPATCH4-214ENST00000529520 NPHP3Q7Z494 1330 aa12.13□□□□□ -0.47
GPATCH4-214ENST00000529520 SAFB2Q14151 953 aaKnown RBP eCLIP12.13□□□□□ -0.47
GPATCH4-214ENST00000529520 USP21Q9UK80 565 aa12.13□□□□□ -0.47
GPATCH4-214ENST00000529520 MYOM2P54296 1465 aa12.13□□□□□ -0.47
GPATCH4-214ENST00000529520 FNBP4Q8N3X1 1017 aaPredicted RBP12.12□□□□□ -0.47
GPATCH4-214ENST00000529520 SIRT1Q96EB6 747 aa12.12□□□□□ -0.47
GPATCH4-214ENST00000529520 DHX57Q6P158 1386 aaKnown RBP12.11□□□□□ -0.47
GPATCH4-214ENST00000529520 PRAM1Q96QH2 718 aa12.11□□□□□ -0.47
GPATCH4-214ENST00000529520 KDM2AQ9Y2K7 1162 aa12.11□□□□□ -0.47
GPATCH4-214ENST00000529520 USP32Q8NFA0 1604 aa12.11□□□□□ -0.47
GPATCH4-214ENST00000529520 KRT28Q7Z3Y7 464 aa12.1□□□□□ -0.47
GPATCH4-214ENST00000529520 KIF1AQ12756 1690 aa12.1□□□□□ -0.47
GPATCH4-214ENST00000529520 ADGRB1O14514 1584 aa12.09□□□□□ -0.47
GPATCH4-214ENST00000529520 BCL9LQ86UU0 1499 aa12.09□□□□□ -0.47
GPATCH4-214ENST00000529520 SPATA31A3Q5VYP0 1347 aa12.09□□□□□ -0.47
GPATCH4-214ENST00000529520 ACIN1Q9UKV3 1341 aaKnown RBP12.09□□□□□ -0.47
GPATCH4-214ENST00000529520 PLEKHG5O94827 1062 aa12.08□□□□□ -0.48
GPATCH4-214ENST00000529520 CABLES1Q8TDN4 633 aa12.08□□□□□ -0.48
GPATCH4-214ENST00000529520 DCAF11Q8TEB1 546 aa12.08□□□□□ -0.48
GPATCH4-214ENST00000529520 TRPC5Q9UL62 973 aaPredicted RBP12.08□□□□□ -0.48
GPATCH4-214ENST00000529520 PHF8Q9UPP1 1060 aa12.08□□□□□ -0.48
GPATCH4-214ENST00000529520 TRAK1Q9UPV9 953 aa12.08□□□□□ -0.48
GPATCH4-214ENST00000529520 ATRNO75882 1429 aa12.08□□□□□ -0.48
GPATCH4-214ENST00000529520 PMFBP1Q8TBY8 1022 aa12.07□□□□□ -0.48
GPATCH4-214ENST00000529520 HIRIP3Q9BW71 556 aaPredicted RBP12.07□□□□□ -0.48
GPATCH4-214ENST00000529520 EP400Q96L91 3159 aa12.07□□□□□ -0.48
GPATCH4-214ENST00000529520 BRWD3Q6RI45 1802 aa12.07□□□□□ -0.48
GPATCH4-214ENST00000529520 DLC1Q96QB1 1528 aa12.06□□□□□ -0.48
GPATCH4-214ENST00000529520 POGKQ9P215 609 aa12.06□□□□□ -0.48
GPATCH4-214ENST00000529520 ABCA3Q99758 1704 aa12.06□□□□□ -0.48
GPATCH4-214ENST00000529520 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.06□□□□□ -0.48
GPATCH4-214ENST00000529520 MINK1Q8N4C8 1332 aaPredicted RBP12.05□□□□□ -0.48
GPATCH4-214ENST00000529520 TRPM3Q9HCF6 1732 aaPredicted RBP12.04□□□□□ -0.48
GPATCH4-214ENST00000529520 HRCP23327 699 aa12.04□□□□□ -0.48
GPATCH4-214ENST00000529520 GJD4Q96KN9 370 aaPredicted RBP12.04□□□□□ -0.48
GPATCH4-214ENST00000529520 SLIT2O94813 1529 aa12.04□□□□□ -0.48
GPATCH4-214ENST00000529520 PRR36Q9H6K5 1346 aa12.04□□□□□ -0.48
GPATCH4-214ENST00000529520 ADGRB2O60241 1585 aa12.04□□□□□ -0.48
GPATCH4-214ENST00000529520 GLI3P10071 1580 aa12.04□□□□□ -0.48
GPATCH4-214ENST00000529520 ARHGEF28Q8N1W1 1705 aaKnown RBP12.03□□□□□ -0.48
GPATCH4-214ENST00000529520 PSME1Q06323 249 aa12.03□□□□□ -0.48
GPATCH4-214ENST00000529520 PLCH1Q4KWH8 1693 aa12.03□□□□□ -0.48
GPATCH4-214ENST00000529520 TNS3Q68CZ2 1445 aa12.03□□□□□ -0.48
GPATCH4-214ENST00000529520 LMOD2Q6P5Q4 547 aa12.02□□□□□ -0.49
GPATCH4-214ENST00000529520 UNC5CLQ8IV45 518 aa12.02□□□□□ -0.49
GPATCH4-214ENST00000529520 ALS2Q96Q42 1657 aa12.01□□□□□ -0.49
GPATCH4-214ENST00000529520 SBNO1A3KN83 1393 aa12.01□□□□□ -0.49
GPATCH4-214ENST00000529520 RALGAPBQ86X10 1494 aa12.01□□□□□ -0.49
GPATCH4-214ENST00000529520 FAM83GA6ND36 823 aa12□□□□□ -0.49
GPATCH4-214ENST00000529520 WASLO00401 505 aaPredicted RBP12□□□□□ -0.49
GPATCH4-214ENST00000529520 ATAD2Q6PL18 1390 aa12□□□□□ -0.49
GPATCH4-214ENST00000529520 ANKARQ7Z5J8 1434 aa12□□□□□ -0.49
GPATCH4-214ENST00000529520 NWD2Q9ULI1 1742 aa12□□□□□ -0.49
GPATCH4-214ENST00000529520 CRYBG1Q9Y4K1 1723 aa12□□□□□ -0.49
GPATCH4-214ENST00000529520 NRAPQ86VF7 1730 aa11.98□□□□□ -0.49
GPATCH4-214ENST00000529520 TULP4Q9NRJ4 1543 aa11.98□□□□□ -0.49
GPATCH4-214ENST00000529520 HAP1P54257 671 aaPredicted RBP11.98□□□□□ -0.49
GPATCH4-214ENST00000529520 NBPF1Q3BBV0 1214 aa11.98□□□□□ -0.49
GPATCH4-214ENST00000529520 ARHGEF10O15013 1369 aa11.96□□□□□ -0.49
GPATCH4-214ENST00000529520 VPS72Q15906 364 aa11.96□□□□□ -0.49
GPATCH4-214ENST00000529520 NUDT16Q96DE0 195 aaKnown RBP11.96□□□□□ -0.49
GPATCH4-214ENST00000529520 STAC3Q96MF2 364 aa11.96□□□□□ -0.49
GPATCH4-214ENST00000529520 ITSN1Q15811 1721 aa11.96□□□□□ -0.49
GPATCH4-214ENST00000529520 KIAA1210Q9ULL0 1709 aa11.96□□□□□ -0.49
GPATCH4-214ENST00000529520 SRCAPQ6ZRS2 3230 aa11.95□□□□□ -0.5
GPATCH4-214ENST00000529520 SEPT12Q8IYM1 358 aa11.95□□□□□ -0.5
GPATCH4-214ENST00000529520 NGDNQ8NEJ9 315 aaKnown RBP11.95□□□□□ -0.5
GPATCH4-214ENST00000529520 CDK19Q9BWU1 502 aa11.95□□□□□ -0.5
GPATCH4-214ENST00000529520 ATP7BP35670 1465 aa11.95□□□□□ -0.5
GPATCH4-214ENST00000529520 ONECUT3O60422 494 aaPredicted RBP11.94□□□□□ -0.5
GPATCH4-214ENST00000529520 PAK3O75914 559 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms