RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 IQSEC2Q5JU85 1478 aa16.16■□□□□ 0.18
CHD7-209ENST00000529472 MSH6P52701 1360 aa16.16■□□□□ 0.18
CHD7-209ENST00000529472 CENPJQ9HC77 1338 aaPredicted RBP16.15■□□□□ 0.18
CHD7-209ENST00000529472 USP47Q96K76 1375 aa16.14■□□□□ 0.17
CHD7-209ENST00000529472 HIRIP3Q9BW71 556 aaPredicted RBP16.14■□□□□ 0.17
CHD7-209ENST00000529472 MINK1Q8N4C8 1332 aaPredicted RBP16.14■□□□□ 0.17
CHD7-209ENST00000529472 C19orf44Q9H6X5 657 aa16.13■□□□□ 0.17
CHD7-209ENST00000529472 CDC42BPGQ6DT37 1551 aa16.12■□□□□ 0.17
CHD7-209ENST00000529472 ATF3P18847 181 aa16.11■□□□□ 0.17
CHD7-209ENST00000529472 ZEB1P37275 1124 aaPredicted RBP16.11■□□□□ 0.17
CHD7-209ENST00000529472 ADGRB2O60241 1585 aa16.11■□□□□ 0.17
CHD7-209ENST00000529472 DCCP43146 1447 aa16.11■□□□□ 0.17
CHD7-209ENST00000529472 UBAP1LF5GYI3 381 aa16.1■□□□□ 0.17
CHD7-209ENST00000529472 ST20-MTHFSA0A0A6YYL1 179 aa16.09■□□□□ 0.17
CHD7-209ENST00000529472 CADPS2Q86UW7 1296 aa16.09■□□□□ 0.17
CHD7-209ENST00000529472 FMN2Q9NZ56 1722 aa16.08■□□□□ 0.16
CHD7-209ENST00000529472 NUTM2FA1L443 756 aa16.07■□□□□ 0.16
CHD7-209ENST00000529472 TOM1O60784 492 aa16.07■□□□□ 0.16
CHD7-209ENST00000529472 TULP4Q9NRJ4 1543 aa16.06■□□□□ 0.16
CHD7-209ENST00000529472 MST1RQ04912 1400 aa16.06■□□□□ 0.16
CHD7-209ENST00000529472 EIF4G2P78344 907 aaKnown RBP eCLIP16.06■□□□□ 0.16
CHD7-209ENST00000529472 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
CHD7-209ENST00000529472 WASLO00401 505 aaPredicted RBP16.05■□□□□ 0.16
CHD7-209ENST00000529472 HSPA5P11021 654 aaKnown RBP16.05■□□□□ 0.16
CHD7-209ENST00000529472 PIP4K2BP78356 416 aa16.05■□□□□ 0.16
CHD7-209ENST00000529472 SBNO2Q9Y2G9 1366 aa16.04■□□□□ 0.16
CHD7-209ENST00000529472 SLAIN2Q9P270 581 aa16.04■□□□□ 0.16
CHD7-209ENST00000529472 C1orf167Q5SNV9 1468 aa16.03■□□□□ 0.16
CHD7-209ENST00000529472 TESK2Q96S53 571 aa16.03■□□□□ 0.16
CHD7-209ENST00000529472 CDK19Q9BWU1 502 aa16.03■□□□□ 0.16
CHD7-209ENST00000529472 RGPD8O14715 1765 aaPredicted RBP16.03■□□□□ 0.16
CHD7-209ENST00000529472 USP32Q8NFA0 1604 aa16.02■□□□□ 0.16
CHD7-209ENST00000529472 EVC2Q86UK5 1308 aa16.02■□□□□ 0.16
CHD7-209ENST00000529472 SRPK2P78362 688 aaKnown RBP16.02■□□□□ 0.16
CHD7-209ENST00000529472 ROBO1Q9Y6N7 1651 aa16.02■□□□□ 0.15
CHD7-209ENST00000529472 CABP2Q9NPB3 220 aa16.01■□□□□ 0.15
CHD7-209ENST00000529472 ATP7BP35670 1465 aa16■□□□□ 0.15
CHD7-209ENST00000529472 ANKARQ7Z5J8 1434 aa16■□□□□ 0.15
CHD7-209ENST00000529472 DISP3Q9P2K9 1392 aa16■□□□□ 0.15
CHD7-209ENST00000529472 PRR36Q9H6K5 1346 aa15.99■□□□□ 0.15
CHD7-209ENST00000529472 ITSN1Q15811 1721 aa15.99■□□□□ 0.15
CHD7-209ENST00000529472 TMF1P82094 1093 aa15.98■□□□□ 0.15
CHD7-209ENST00000529472 ESCO1Q5FWF5 840 aa15.98■□□□□ 0.15
CHD7-209ENST00000529472 BRINP3Q76B58 766 aa15.98■□□□□ 0.15
CHD7-209ENST00000529472 NUDT16Q96DE0 195 aaKnown RBP15.98■□□□□ 0.15
CHD7-209ENST00000529472 ORAI2Q96SN7 254 aa15.98■□□□□ 0.15
CHD7-209ENST00000529472 TOPAZ1Q8N9V7 1692 aa15.97■□□□□ 0.15
CHD7-209ENST00000529472 SLC24A1O60721 1099 aa15.96■□□□□ 0.15
CHD7-209ENST00000529472 FBXO41Q8TF61 875 aa15.96■□□□□ 0.15
CHD7-209ENST00000529472 KIF1AQ12756 1690 aa15.95■□□□□ 0.14
CHD7-209ENST00000529472 PPIP5K1Q6PFW1 1433 aa15.94■□□□□ 0.14
CHD7-209ENST00000529472 PHF8Q9UPP1 1060 aa15.94■□□□□ 0.14
CHD7-209ENST00000529472 ATAD2Q6PL18 1390 aa15.94■□□□□ 0.14
CHD7-209ENST00000529472 PMFBP1Q8TBY8 1022 aa15.93■□□□□ 0.14
CHD7-209ENST00000529472 DDX17Q92841 729 aaKnown RBP15.93■□□□□ 0.14
CHD7-209ENST00000529472 POLR3GLQ9BT43 218 aa15.93■□□□□ 0.14
CHD7-209ENST00000529472 CCDC61Q9Y6R9 512 aa15.93■□□□□ 0.14
CHD7-209ENST00000529472 NHSL1Q5SYE7 1610 aa15.93■□□□□ 0.14
CHD7-209ENST00000529472 PHLPP1O60346 1717 aa15.91■□□□□ 0.14
CHD7-209ENST00000529472 CDCA8Q53HL2 280 aa15.91■□□□□ 0.14
CHD7-209ENST00000529472 AHDC1Q5TGY3 1603 aaPredicted RBP15.9■□□□□ 0.14
CHD7-209ENST00000529472 FOXO3O43524 673 aa15.9■□□□□ 0.14
CHD7-209ENST00000529472 TMC1Q8TDI8 760 aa15.9■□□□□ 0.14
CHD7-209ENST00000529472 CABP1Q9NZU7 370 aa15.9■□□□□ 0.14
CHD7-209ENST00000529472 C11orf95C9JLR9 678 aaPredicted RBP15.89■□□□□ 0.13
CHD7-209ENST00000529472 XPCQ01831 940 aaPredicted RBP15.89■□□□□ 0.13
CHD7-209ENST00000529472 NGDNQ8NEJ9 315 aaKnown RBP15.89■□□□□ 0.13
CHD7-209ENST00000529472 NPHP3Q7Z494 1330 aa15.89■□□□□ 0.13
CHD7-209ENST00000529472 HSPA1LP34931 641 aa15.88■□□□□ 0.13
CHD7-209ENST00000529472 PUS7Q96PZ0 661 aaKnown RBP15.88■□□□□ 0.13
CHD7-209ENST00000529472 MYOM1P52179 1685 aa15.88■□□□□ 0.13
CHD7-209ENST00000529472 ACEP12821 1306 aa15.88■□□□□ 0.13
CHD7-209ENST00000529472 PLEKHG3A1L390 1219 aa15.87■□□□□ 0.13
CHD7-209ENST00000529472 COL16A1Q07092 1604 aaPredicted RBP15.86■□□□□ 0.13
CHD7-209ENST00000529472 PXDNQ92626 1479 aa15.86■□□□□ 0.13
CHD7-209ENST00000529472 PSME1Q06323 249 aa15.86■□□□□ 0.13
CHD7-209ENST00000529472 SLC12A5Q9H2X9 1139 aa15.86■□□□□ 0.13
CHD7-209ENST00000529472 KIF7Q2M1P5 1343 aa15.86■□□□□ 0.13
CHD7-209ENST00000529472 POLR3AO14802 1390 aaPredicted RBP15.86■□□□□ 0.13
CHD7-209ENST00000529472 AKAP12Q02952 1782 aa15.85■□□□□ 0.13
CHD7-209ENST00000529472 NINLQ9Y2I6 1382 aa15.85■□□□□ 0.13
CHD7-209ENST00000529472 KRT28Q7Z3Y7 464 aa15.84■□□□□ 0.13
CHD7-209ENST00000529472 CD163L1Q9NR16 1453 aa15.84■□□□□ 0.13
CHD7-209ENST00000529472 TRPM3Q9HCF6 1732 aaPredicted RBP15.83■□□□□ 0.13
CHD7-209ENST00000529472 ILDR1Q86SU0 546 aaPredicted RBP15.83■□□□□ 0.12
CHD7-209ENST00000529472 SOS2Q07890 1332 aaPredicted RBP15.83■□□□□ 0.12
CHD7-209ENST00000529472 WASHC2AQ641Q2 1341 aa15.83■□□□□ 0.12
CHD7-209ENST00000529472 CCDC7Q96M83 1385 aa15.83■□□□□ 0.12
CHD7-209ENST00000529472 MON2Q7Z3U7 1717 aa15.82■□□□□ 0.12
CHD7-209ENST00000529472 PAK3O75914 559 aaPredicted RBP15.82■□□□□ 0.12
CHD7-209ENST00000529472 HDGFL2Q7Z4V5 671 aaPredicted RBP15.82■□□□□ 0.12
CHD7-209ENST00000529472 TERF2IPQ9NYB0 399 aa15.82■□□□□ 0.12
CHD7-209ENST00000529472 A0A1W2PP64 1363 aa15.82■□□□□ 0.12
CHD7-209ENST00000529472 KTN1Q86UP2 1357 aaKnown RBP15.82■□□□□ 0.12
CHD7-209ENST00000529472 USP6P35125 1406 aa15.82■□□□□ 0.12
CHD7-209ENST00000529472 CPSF1Q10570 1443 aaKnown RBP15.82■□□□□ 0.12
CHD7-209ENST00000529472 NRKQ7Z2Y5 1582 aa15.8■□□□□ 0.12
CHD7-209ENST00000529472 TNS3Q68CZ2 1445 aa15.8■□□□□ 0.12
CHD7-209ENST00000529472 ANKRD36BQ8N2N9 1353 aa15.8■□□□□ 0.12
CHD7-209ENST00000529472 SBNO1A3KN83 1393 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms