RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 RBM6P78332 1123 aaKnown RBP9.41□□□□□ -0.9
CHRNA6-202ENST00000529467 C8orf37Q96NL8 207 aa9.41□□□□□ -0.9
CHRNA6-202ENST00000529467 CLTCL1P53675 1640 aa9.41□□□□□ -0.9
CHRNA6-202ENST00000529467 C1orf167Q5SNV9 1468 aa9.4□□□□□ -0.9
CHRNA6-202ENST00000529467 NALCNQ8IZF0 1738 aa9.4□□□□□ -0.9
CHRNA6-202ENST00000529467 VGFO15240 615 aaPredicted RBP9.4□□□□□ -0.9
CHRNA6-202ENST00000529467 SAMD1Q6SPF0 538 aaPredicted RBP9.4□□□□□ -0.9
CHRNA6-202ENST00000529467 ORAI2Q96SN7 254 aa9.4□□□□□ -0.9
CHRNA6-202ENST00000529467 SOS2Q07890 1332 aaPredicted RBP9.39□□□□□ -0.91
CHRNA6-202ENST00000529467 NGLY1Q96IV0 654 aa9.39□□□□□ -0.91
CHRNA6-202ENST00000529467 LAMC1P11047 1609 aa9.38□□□□□ -0.91
CHRNA6-202ENST00000529467 ROBO2Q9HCK4 1378 aa9.38□□□□□ -0.91
CHRNA6-202ENST00000529467 ADAMTS2O95450 1211 aa9.38□□□□□ -0.91
CHRNA6-202ENST00000529467 RGS12O14924 1447 aa9.38□□□□□ -0.91
CHRNA6-202ENST00000529467 NAIPQ13075 1403 aa9.38□□□□□ -0.91
CHRNA6-202ENST00000529467 RPGRIP1LQ68CZ1 1315 aa9.37□□□□□ -0.91
CHRNA6-202ENST00000529467 PTCH1Q13635 1447 aa9.37□□□□□ -0.91
CHRNA6-202ENST00000529467 FNBP4Q8N3X1 1017 aaPredicted RBP9.36□□□□□ -0.91
CHRNA6-202ENST00000529467 USP21Q9UK80 565 aa9.36□□□□□ -0.91
CHRNA6-202ENST00000529467 PRAG1Q86YV5 1406 aa9.36□□□□□ -0.91
CHRNA6-202ENST00000529467 RRBP1Q9P2E9 1410 aaKnown RBP9.36□□□□□ -0.91
CHRNA6-202ENST00000529467 HFM1A2PYH4 1435 aa9.34□□□□□ -0.91
CHRNA6-202ENST00000529467 SLC4A1APQ9BWU0 796 aaKnown RBP9.34□□□□□ -0.91
CHRNA6-202ENST00000529467 TRPC5Q9UL62 973 aaPredicted RBP9.34□□□□□ -0.91
CHRNA6-202ENST00000529467 PPLO60437 1756 aa9.34□□□□□ -0.91
CHRNA6-202ENST00000529467 ESCO1Q5FWF5 840 aa9.33□□□□□ -0.92
CHRNA6-202ENST00000529467 ATRNO75882 1429 aa9.32□□□□□ -0.92
CHRNA6-202ENST00000529467 COL22A1Q8NFW1 1626 aaPredicted RBP9.32□□□□□ -0.92
CHRNA6-202ENST00000529467 NPHP3Q7Z494 1330 aa9.31□□□□□ -0.92
CHRNA6-202ENST00000529467 ADGRF5Q8IZF2 1346 aa9.31□□□□□ -0.92
CHRNA6-202ENST00000529467 FOXO3O43524 673 aa9.31□□□□□ -0.92
CHRNA6-202ENST00000529467 WAPLQ7Z5K2 1190 aa9.31□□□□□ -0.92
CHRNA6-202ENST00000529467 ATAD2Q6PL18 1390 aa9.31□□□□□ -0.92
CHRNA6-202ENST00000529467 BCL9LQ86UU0 1499 aa9.31□□□□□ -0.92
CHRNA6-202ENST00000529467 MYOM2P54296 1465 aa9.3□□□□□ -0.92
CHRNA6-202ENST00000529467 PXDNQ92626 1479 aa9.3□□□□□ -0.92
CHRNA6-202ENST00000529467 MYCNP04198 464 aaPredicted RBP9.3□□□□□ -0.92
CHRNA6-202ENST00000529467 XPCQ01831 940 aaPredicted RBP9.3□□□□□ -0.92
CHRNA6-202ENST00000529467 ABCC11Q96J66 1382 aa9.29□□□□□ -0.92
CHRNA6-202ENST00000529467 MARF1Q9Y4F3 1742 aaKnown RBP9.29□□□□□ -0.92
CHRNA6-202ENST00000529467 NUTM2FA1L443 756 aa9.29□□□□□ -0.92
CHRNA6-202ENST00000529467 RGL3Q3MIN7 710 aa9.29□□□□□ -0.92
CHRNA6-202ENST00000529467 GJD4Q96KN9 370 aaPredicted RBP9.29□□□□□ -0.92
CHRNA6-202ENST00000529467 STK26Q9P289 416 aa9.29□□□□□ -0.92
CHRNA6-202ENST00000529467 TECPR2O15040 1411 aa9.29□□□□□ -0.92
CHRNA6-202ENST00000529467 CDC42BPGQ6DT37 1551 aa9.29□□□□□ -0.92
CHRNA6-202ENST00000529467 LRPPRCP42704 1394 aaKnown RBP9.28□□□□□ -0.92
CHRNA6-202ENST00000529467 TMEM132EQ6IEE7 984 aa9.28□□□□□ -0.92
CHRNA6-202ENST00000529467 CCDC125Q86Z20 511 aa9.28□□□□□ -0.92
CHRNA6-202ENST00000529467 SPATA31E1Q6ZUB1 1445 aa9.28□□□□□ -0.92
CHRNA6-202ENST00000529467 PLEKHH1Q9ULM0 1364 aa9.27□□□□□ -0.93
CHRNA6-202ENST00000529467 SIRT1Q96EB6 747 aa9.27□□□□□ -0.93
CHRNA6-202ENST00000529467 ZRANB1Q9UGI0 708 aa9.27□□□□□ -0.93
CHRNA6-202ENST00000529467 SPATA31A3Q5VYP0 1347 aa9.27□□□□□ -0.93
CHRNA6-202ENST00000529467 ANKRD30BQ9BXX2 1392 aa9.26□□□□□ -0.93
CHRNA6-202ENST00000529467 IFT172Q9UG01 1749 aa9.26□□□□□ -0.93
CHRNA6-202ENST00000529467 CCDC144AA2RUR9 1427 aa9.26□□□□□ -0.93
CHRNA6-202ENST00000529467 ABCB7O75027 752 aa9.26□□□□□ -0.93
CHRNA6-202ENST00000529467 KRT28Q7Z3Y7 464 aa9.26□□□□□ -0.93
CHRNA6-202ENST00000529467 UNC5CLQ8IV45 518 aa9.26□□□□□ -0.93
CHRNA6-202ENST00000529467 MPHOSPH9Q99550 1183 aa9.26□□□□□ -0.93
CHRNA6-202ENST00000529467 C14orf93Q9H972 538 aaKnown RBP9.25□□□□□ -0.93
CHRNA6-202ENST00000529467 SLIT2O94813 1529 aa9.25□□□□□ -0.93
CHRNA6-202ENST00000529467 KNDC1Q76NI1 1749 aa9.25□□□□□ -0.93
CHRNA6-202ENST00000529467 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.25□□□□□ -0.93
CHRNA6-202ENST00000529467 FMN2Q9NZ56 1722 aa9.25□□□□□ -0.93
CHRNA6-202ENST00000529467 RGPD8O14715 1765 aaPredicted RBP9.24□□□□□ -0.93
CHRNA6-202ENST00000529467 PIK3C2GO75747 1445 aa9.24□□□□□ -0.93
CHRNA6-202ENST00000529467 YTHDC2Q9H6S0 1430 aaKnown RBP9.24□□□□□ -0.93
CHRNA6-202ENST00000529467 GLI3P10071 1580 aa9.24□□□□□ -0.93
CHRNA6-202ENST00000529467 RALGAPBQ86X10 1494 aa9.23□□□□□ -0.93
CHRNA6-202ENST00000529467 ONECUT3O60422 494 aaPredicted RBP9.23□□□□□ -0.93
CHRNA6-202ENST00000529467 PHF8Q9UPP1 1060 aa9.23□□□□□ -0.93
CHRNA6-202ENST00000529467 BRWD3Q6RI45 1802 aa9.23□□□□□ -0.93
CHRNA6-202ENST00000529467 PSME1Q06323 249 aa9.22□□□□□ -0.93
CHRNA6-202ENST00000529467 CFAP70Q5T0N1 1121 aa9.22□□□□□ -0.93
CHRNA6-202ENST00000529467 CABLES1Q8TDN4 633 aa9.22□□□□□ -0.93
CHRNA6-202ENST00000529467 KIF1AQ12756 1690 aa9.22□□□□□ -0.93
CHRNA6-202ENST00000529467 VPS72Q15906 364 aa9.21□□□□□ -0.94
CHRNA6-202ENST00000529467 SEPT12Q8IYM1 358 aa9.21□□□□□ -0.94
CHRNA6-202ENST00000529467 DHX57Q6P158 1386 aaKnown RBP9.21□□□□□ -0.94
CHRNA6-202ENST00000529467 BLMP54132 1417 aaPredicted RBP9.21□□□□□ -0.94
CHRNA6-202ENST00000529467 USP32Q8NFA0 1604 aa9.2□□□□□ -0.94
CHRNA6-202ENST00000529467 FAM83GA6ND36 823 aa9.2□□□□□ -0.94
CHRNA6-202ENST00000529467 DEFB132Q7Z7B7 95 aa9.2□□□□□ -0.94
CHRNA6-202ENST00000529467 SBNO1A3KN83 1393 aa9.2□□□□□ -0.94
CHRNA6-202ENST00000529467 TNS3Q68CZ2 1445 aa9.2□□□□□ -0.94
CHRNA6-202ENST00000529467 NRXN1Q9ULB1 1477 aa9.2□□□□□ -0.94
CHRNA6-202ENST00000529467 EP400Q96L91 3159 aa9.19□□□□□ -0.94
CHRNA6-202ENST00000529467 HAP1P54257 671 aaPredicted RBP9.19□□□□□ -0.94
CHRNA6-202ENST00000529467 PRAM1Q96QH2 718 aa9.19□□□□□ -0.94
CHRNA6-202ENST00000529467 PLEKHG5O94827 1062 aa9.18□□□□□ -0.94
CHRNA6-202ENST00000529467 SAFB2Q14151 953 aaKnown RBP eCLIP9.18□□□□□ -0.94
CHRNA6-202ENST00000529467 KRT27Q7Z3Y8 459 aa9.18□□□□□ -0.94
CHRNA6-202ENST00000529467 PMFBP1Q8TBY8 1022 aa9.18□□□□□ -0.94
CHRNA6-202ENST00000529467 NWD2Q9ULI1 1742 aa9.18□□□□□ -0.94
CHRNA6-202ENST00000529467 PLCH1Q4KWH8 1693 aa9.17□□□□□ -0.94
CHRNA6-202ENST00000529467 ACIN1Q9UKV3 1341 aaKnown RBP9.17□□□□□ -0.94
CHRNA6-202ENST00000529467 SF3B2Q13435 895 aaKnown RBP9.17□□□□□ -0.94
CHRNA6-202ENST00000529467 LMOD2Q6P5Q4 547 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms