RNA–Protein interactions for RNA: ENST00000529251.1

TCN1-202, Transcript of transcobalamin 1, humanhuman

TSL 3

Gene TCN1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-202ENST00000529251 TRIM67Q6ZTA4 783 aa8.53□□□□□ -1.04
TCN1-202ENST00000529251 NEUROD2Q15784 382 aa8.52□□□□□ -1.05
TCN1-202ENST00000529251 NRG2O14511 850 aaPredicted RBP8.51□□□□□ -1.05
TCN1-202ENST00000529251 NUTM1Q86Y26 1132 aa8.51□□□□□ -1.05
TCN1-202ENST00000529251 SPIRE2Q8WWL2 714 aa8.51□□□□□ -1.05
TCN1-202ENST00000529251 USB1Q9BQ65 265 aaKnown RBP8.51□□□□□ -1.05
TCN1-202ENST00000529251 FCF1Q9Y324 198 aaKnown RBP8.51□□□□□ -1.05
TCN1-202ENST00000529251 MMP16P51512 607 aa8.5□□□□□ -1.05
TCN1-202ENST00000529251 ZNF598Q86UK7 904 aaKnown RBP8.5□□□□□ -1.05
TCN1-202ENST00000529251 PDZRN3Q9UPQ7 1066 aa8.5□□□□□ -1.05
TCN1-202ENST00000529251 LCE2BO14633 110 aa8.49□□□□□ -1.05
TCN1-202ENST00000529251 MS4A1P11836 297 aa8.49□□□□□ -1.05
TCN1-202ENST00000529251 PCDHGC3Q9UN70 934 aa8.49□□□□□ -1.05
TCN1-202ENST00000529251 DXOO77932 396 aaKnown RBP8.48□□□□□ -1.05
TCN1-202ENST00000529251 Q6ZNB5 142 aa8.48□□□□□ -1.05
TCN1-202ENST00000529251 BEGAINQ9BUH8 593 aa8.48□□□□□ -1.05
TCN1-202ENST00000529251 FDX1P10109 184 aa8.47□□□□□ -1.05
TCN1-202ENST00000529251 PDE4DQ08499 809 aa8.47□□□□□ -1.05
TCN1-202ENST00000529251 ZNF697Q5TEC3 545 aa8.47□□□□□ -1.05
TCN1-202ENST00000529251 SYMPKQ92797 1274 aaKnown RBP8.47□□□□□ -1.05
TCN1-202ENST00000529251 MOXD2PA6NHM9 499 aa8.46□□□□□ -1.06
TCN1-202ENST00000529251 RPIAP49247 311 aa8.46□□□□□ -1.06
TCN1-202ENST00000529251 GDF9O60383 454 aa8.45□□□□□ -1.06
TCN1-202ENST00000529251 NDUFV2P19404 249 aa8.45□□□□□ -1.06
TCN1-202ENST00000529251 PRR20EP86478 221 aa8.45□□□□□ -1.06
TCN1-202ENST00000529251 PRR20CP86479 221 aa8.45□□□□□ -1.06
TCN1-202ENST00000529251 PRR20DP86480 221 aa8.45□□□□□ -1.06
TCN1-202ENST00000529251 PRR20BP86481 221 aa8.45□□□□□ -1.06
TCN1-202ENST00000529251 PRR20AP86496 221 aa8.45□□□□□ -1.06
TCN1-202ENST00000529251 RETREG3Q86VR2 466 aa8.44□□□□□ -1.06
TCN1-202ENST00000529251 TBC1D2Q9BYX2 928 aa8.43□□□□□ -1.06
TCN1-202ENST00000529251 PKD2L1Q9P0L9 805 aa8.43□□□□□ -1.06
TCN1-202ENST00000529251 JUNDP17535 347 aa8.42□□□□□ -1.06
TCN1-202ENST00000529251 GJA5P36382 358 aa8.42□□□□□ -1.06
TCN1-202ENST00000529251 TNFRSF10AO00220 468 aa8.41□□□□□ -1.06
TCN1-202ENST00000529251 C6orf229H3BNL8 230 aa8.4□□□□□ -1.06
TCN1-202ENST00000529251 CD2BP2O95400 341 aaKnown RBP8.4□□□□□ -1.06
TCN1-202ENST00000529251 RSBN1LQ6PCB5 846 aaPredicted RBP8.4□□□□□ -1.06
TCN1-202ENST00000529251 TRAF7Q6Q0C0 670 aa8.4□□□□□ -1.06
TCN1-202ENST00000529251 KDM4CQ9H3R0 1056 aa8.4□□□□□ -1.06
TCN1-202ENST00000529251 SPTLC1O15269 473 aa8.39□□□□□ -1.07
TCN1-202ENST00000529251 DIXDC1Q155Q3 683 aa8.39□□□□□ -1.07
TCN1-202ENST00000529251 IL27Q8NEV9 243 aa8.39□□□□□ -1.07
TCN1-202ENST00000529251 ZBTB24O43167 697 aaPredicted RBP8.38□□□□□ -1.07
TCN1-202ENST00000529251 FOXC1Q12948 553 aa8.38□□□□□ -1.07
TCN1-202ENST00000529251 TRIM32Q13049 653 aa8.38□□□□□ -1.07
TCN1-202ENST00000529251 FAM117AQ9C073 453 aa8.38□□□□□ -1.07
TCN1-202ENST00000529251 PCDHB15Q9Y5E8 787 aa8.38□□□□□ -1.07
TCN1-202ENST00000529251 MTMR2Q13614 643 aa8.37□□□□□ -1.07
TCN1-202ENST00000529251 SPDYE5A6NIY4 337 aa8.36□□□□□ -1.07
TCN1-202ENST00000529251 MYSM1Q5VVJ2 828 aa8.36□□□□□ -1.07
TCN1-202ENST00000529251 RIC3Q7Z5B4 369 aa8.36□□□□□ -1.07
TCN1-202ENST00000529251 CCDC24Q8N4L8 307 aa8.36□□□□□ -1.07
TCN1-202ENST00000529251 PRR7Q8TB68 274 aa8.36□□□□□ -1.07
TCN1-202ENST00000529251 TOR4AQ9NXH8 423 aa8.36□□□□□ -1.07
TCN1-202ENST00000529251 DGAT1O75907 488 aa8.35□□□□□ -1.07
TCN1-202ENST00000529251 PTCRAQ6ISU1 281 aaPredicted RBP8.35□□□□□ -1.07
TCN1-202ENST00000529251 NUDT12Q9BQG2 462 aa8.35□□□□□ -1.07
TCN1-202ENST00000529251 WNT7AO00755 349 aa8.34□□□□□ -1.07
TCN1-202ENST00000529251 HRCP23327 699 aa8.34□□□□□ -1.07
TCN1-202ENST00000529251 PTPRNQ16849 979 aa8.34□□□□□ -1.07
TCN1-202ENST00000529251 DESI1Q6ICB0 168 aa8.34□□□□□ -1.07
TCN1-202ENST00000529251 LIMD1Q9UGP4 676 aa8.34□□□□□ -1.07
TCN1-202ENST00000529251 CFAP99D6REC4 459 aa8.33□□□□□ -1.08
TCN1-202ENST00000529251 CCNYL3P0C7X3 344 aa8.33□□□□□ -1.08
TCN1-202ENST00000529251 SKOR1P84550 965 aa8.33□□□□□ -1.08
TCN1-202ENST00000529251 MYT1Q01538 1121 aa8.33□□□□□ -1.08
TCN1-202ENST00000529251 PKDCCQ504Y2 493 aa8.33□□□□□ -1.08
TCN1-202ENST00000529251 PRPF38BQ5VTL8 546 aaKnown RBP8.33□□□□□ -1.08
TCN1-202ENST00000529251 PLEKHG3A1L390 1219 aa8.32□□□□□ -1.08
TCN1-202ENST00000529251 FAM187AA6NFU0 413 aa8.32□□□□□ -1.08
TCN1-202ENST00000529251 TUSC1Q2TAM9 212 aa8.32□□□□□ -1.08
TCN1-202ENST00000529251 CABLES1Q8TDN4 633 aa8.32□□□□□ -1.08
TCN1-202ENST00000529251 ZBTB3Q9H5J0 574 aa8.32□□□□□ -1.08
TCN1-202ENST00000529251 WNT7BP56706 349 aa8.31□□□□□ -1.08
TCN1-202ENST00000529251 EVA1BQ9NVM1 165 aa8.31□□□□□ -1.08
TCN1-202ENST00000529251 QPCTQ16769 361 aa8.3□□□□□ -1.08
TCN1-202ENST00000529251 TMEM132AQ24JP5 1023 aa8.3□□□□□ -1.08
TCN1-202ENST00000529251 MRGPRX2Q96LB1 330 aa8.3□□□□□ -1.08
TCN1-202ENST00000529251 LILRB3O75022 631 aa8.29□□□□□ -1.08
TCN1-202ENST00000529251 CSPP1Q1MSJ5 1256 aa8.29□□□□□ -1.08
TCN1-202ENST00000529251 RC3H1Q5TC82 1133 aaKnown RBP8.29□□□□□ -1.08
TCN1-202ENST00000529251 LYPD8Q6UX82 237 aa8.29□□□□□ -1.08
TCN1-202ENST00000529251 CYP4X1Q8N118 509 aa8.29□□□□□ -1.08
TCN1-202ENST00000529251 RSPH6AQ9H0K4 717 aa8.28□□□□□ -1.08
TCN1-202ENST00000529251 AVPP01185 164 aa8.27□□□□□ -1.09
TCN1-202ENST00000529251 SMPD1P17405 629 aa8.27□□□□□ -1.09
TCN1-202ENST00000529251 CLK2P49760 499 aaKnown RBP8.27□□□□□ -1.09
TCN1-202ENST00000529251 KCNH2Q12809 1159 aa8.27□□□□□ -1.09
TCN1-202ENST00000529251 SNIP1Q8TAD8 396 aaKnown RBP8.27□□□□□ -1.09
TCN1-202ENST00000529251 UNC93B1Q9H1C4 597 aa8.27□□□□□ -1.09
TCN1-202ENST00000529251 CRIPAKQ8N1N5 446 aa8.26□□□□□ -1.09
TCN1-202ENST00000529251 AAASQ9NRG9 546 aa8.26□□□□□ -1.09
TCN1-202ENST00000529251 POLR3EQ9NVU0 708 aa8.26□□□□□ -1.09
TCN1-202ENST00000529251 TTC24A2A3L6 582 aaPredicted RBP8.25□□□□□ -1.09
TCN1-202ENST00000529251 ST8SIA5O15466 376 aa8.25□□□□□ -1.09
TCN1-202ENST00000529251 PER1O15534 1290 aaPredicted RBP8.25□□□□□ -1.09
TCN1-202ENST00000529251 F12P00748 615 aaPredicted RBP8.25□□□□□ -1.09
TCN1-202ENST00000529251 SH3BP2P78314 561 aa8.25□□□□□ -1.09
TCN1-202ENST00000529251 RTL5Q5HYW3 569 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms