RNA–Protein interactions for RNA: ENST00000529199.1

CTSF-206, Transcript of cathepsin F, humanhuman

TSL 4

Gene CTSF, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-206ENST00000529199 PPLO60437 1756 aa29.72■■■□□ 2.35
CTSF-206ENST00000529199 PRAG1Q86YV5 1406 aa29.71■■■□□ 2.35
CTSF-206ENST00000529199 NUTM2FA1L443 756 aa29.71■■■□□ 2.35
CTSF-206ENST00000529199 WAPLQ7Z5K2 1190 aa29.71■■■□□ 2.35
CTSF-206ENST00000529199 USP21Q9UK80 565 aa29.71■■■□□ 2.35
CTSF-206ENST00000529199 TMEM132EQ6IEE7 984 aa29.69■■■□□ 2.34
CTSF-206ENST00000529199 FOXO3O43524 673 aa29.68■■■□□ 2.34
CTSF-206ENST00000529199 XPCQ01831 940 aaPredicted RBP29.68■■■□□ 2.34
CTSF-206ENST00000529199 RGS12O14924 1447 aa29.68■■■□□ 2.34
CTSF-206ENST00000529199 NPHP3Q7Z494 1330 aa29.68■■■□□ 2.34
CTSF-206ENST00000529199 ANKRD30BQ9BXX2 1392 aa29.65■■■□□ 2.34
CTSF-206ENST00000529199 LAMC1P11047 1609 aa29.65■■■□□ 2.34
CTSF-206ENST00000529199 TRPC5Q9UL62 973 aaPredicted RBP29.64■■■□□ 2.34
CTSF-206ENST00000529199 SPATA31E1Q6ZUB1 1445 aa29.63■■■□□ 2.33
CTSF-206ENST00000529199 LRPPRCP42704 1394 aaKnown RBP29.63■■■□□ 2.33
CTSF-206ENST00000529199 FNBP4Q8N3X1 1017 aaPredicted RBP29.62■■■□□ 2.33
CTSF-206ENST00000529199 PLEKHH1Q9ULM0 1364 aa29.6■■■□□ 2.33
CTSF-206ENST00000529199 ABCC11Q96J66 1382 aa29.59■■■□□ 2.33
CTSF-206ENST00000529199 CDC42BPGQ6DT37 1551 aa29.59■■■□□ 2.33
CTSF-206ENST00000529199 TECPR2O15040 1411 aa29.56■■■□□ 2.32
CTSF-206ENST00000529199 PXDNQ92626 1479 aa29.55■■■□□ 2.32
CTSF-206ENST00000529199 PIK3C2GO75747 1445 aa29.54■■■□□ 2.32
CTSF-206ENST00000529199 MYOM2P54296 1465 aa29.53■■■□□ 2.32
CTSF-206ENST00000529199 YTHDC2Q9H6S0 1430 aaKnown RBP29.53■■■□□ 2.32
CTSF-206ENST00000529199 ATAD2Q6PL18 1390 aa29.52■■■□□ 2.32
CTSF-206ENST00000529199 COL22A1Q8NFW1 1626 aaPredicted RBP29.51■■■□□ 2.31
CTSF-206ENST00000529199 CFAP70Q5T0N1 1121 aa29.5■■■□□ 2.31
CTSF-206ENST00000529199 C14orf93Q9H972 538 aaKnown RBP29.5■■■□□ 2.31
CTSF-206ENST00000529199 ATRNO75882 1429 aa29.5■■■□□ 2.31
CTSF-206ENST00000529199 KRT28Q7Z3Y7 464 aa29.49■■■□□ 2.31
CTSF-206ENST00000529199 SIRT1Q96EB6 747 aa29.48■■■□□ 2.31
CTSF-206ENST00000529199 SAFB2Q14151 953 aaKnown RBP eCLIP29.47■■■□□ 2.31
CTSF-206ENST00000529199 SPATA31A3Q5VYP0 1347 aa29.46■■■□□ 2.31
CTSF-206ENST00000529199 ACIN1Q9UKV3 1341 aaKnown RBP29.46■■■□□ 2.31
CTSF-206ENST00000529199 IFT172Q9UG01 1749 aa29.46■■■□□ 2.31
CTSF-206ENST00000529199 PLEKHG5O94827 1062 aa29.46■■■□□ 2.31
CTSF-206ENST00000529199 DHX57Q6P158 1386 aaKnown RBP29.46■■■□□ 2.31
CTSF-206ENST00000529199 BCL9LQ86UU0 1499 aa29.46■■■□□ 2.31
CTSF-206ENST00000529199 GJD4Q96KN9 370 aaPredicted RBP29.45■■■□□ 2.31
CTSF-206ENST00000529199 PHF8Q9UPP1 1060 aa29.44■■■□□ 2.3
CTSF-206ENST00000529199 HAP1P54257 671 aaPredicted RBP29.43■■■□□ 2.3
CTSF-206ENST00000529199 PRAM1Q96QH2 718 aa29.43■■■□□ 2.3
CTSF-206ENST00000529199 PSME1Q06323 249 aa29.42■■■□□ 2.3
CTSF-206ENST00000529199 KNDC1Q76NI1 1749 aa29.41■■■□□ 2.3
CTSF-206ENST00000529199 POGKQ9P215 609 aa29.41■■■□□ 2.3
CTSF-206ENST00000529199 LMOD2Q6P5Q4 547 aa29.4■■■□□ 2.3
CTSF-206ENST00000529199 UNC5CLQ8IV45 518 aa29.4■■■□□ 2.3
CTSF-206ENST00000529199 FMN2Q9NZ56 1722 aa29.39■■■□□ 2.3
CTSF-206ENST00000529199 CABLES1Q8TDN4 633 aa29.38■■■□□ 2.29
CTSF-206ENST00000529199 NRXN1Q9ULB1 1477 aa29.35■■■□□ 2.29
CTSF-206ENST00000529199 PMFBP1Q8TBY8 1022 aa29.34■■■□□ 2.29
CTSF-206ENST00000529199 RAB3GAP2Q9H2M9 1393 aa29.34■■■□□ 2.29
CTSF-206ENST00000529199 KIF1AQ12756 1690 aa29.34■■■□□ 2.29
CTSF-206ENST00000529199 KDM2AQ9Y2K7 1162 aa29.33■■■□□ 2.29
CTSF-206ENST00000529199 MARF1Q9Y4F3 1742 aaKnown RBP29.32■■■□□ 2.28
CTSF-206ENST00000529199 CCDC125Q86Z20 511 aa29.32■■■□□ 2.28
CTSF-206ENST00000529199 TRAK1Q9UPV9 953 aa29.32■■■□□ 2.28
CTSF-206ENST00000529199 SRCAPQ6ZRS2 3230 aa29.32■■■□□ 2.28
CTSF-206ENST00000529199 EP400Q96L91 3159 aa29.32■■■□□ 2.28
CTSF-206ENST00000529199 TNS3Q68CZ2 1445 aa29.31■■■□□ 2.28
CTSF-206ENST00000529199 ZRANB1Q9UGI0 708 aa29.31■■■□□ 2.28
CTSF-206ENST00000529199 HIRIP3Q9BW71 556 aaPredicted RBP29.3■■■□□ 2.28
CTSF-206ENST00000529199 CCDC9Q9Y3X0 531 aaKnown RBP29.3■■■□□ 2.28
CTSF-206ENST00000529199 SLIT2O94813 1529 aa29.3■■■□□ 2.28
CTSF-206ENST00000529199 RALGAPBQ86X10 1494 aa29.29■■■□□ 2.28
CTSF-206ENST00000529199 DCAF11Q8TEB1 546 aa29.27■■■□□ 2.28
CTSF-206ENST00000529199 SBNO1A3KN83 1393 aa29.26■■■□□ 2.28
CTSF-206ENST00000529199 RGPD8O14715 1765 aaPredicted RBP29.26■■■□□ 2.28
CTSF-206ENST00000529199 MINK1Q8N4C8 1332 aaPredicted RBP29.25■■■□□ 2.27
CTSF-206ENST00000529199 ARHGEF10O15013 1369 aa29.25■■■□□ 2.27
CTSF-206ENST00000529199 VPS72Q15906 364 aa29.24■■■□□ 2.27
CTSF-206ENST00000529199 SEPT12Q8IYM1 358 aa29.24■■■□□ 2.27
CTSF-206ENST00000529199 USP32Q8NFA0 1604 aa29.23■■■□□ 2.27
CTSF-206ENST00000529199 FAM83GA6ND36 823 aa29.22■■■□□ 2.27
CTSF-206ENST00000529199 GLI3P10071 1580 aa29.22■■■□□ 2.27
CTSF-206ENST00000529199 DLC1Q96QB1 1528 aa29.21■■■□□ 2.27
CTSF-206ENST00000529199 ANKARQ7Z5J8 1434 aa29.2■■■□□ 2.27
CTSF-206ENST00000529199 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.2■■■□□ 2.27
CTSF-206ENST00000529199 GPRASP1Q5JY77 1395 aa29.18■■■□□ 2.26
CTSF-206ENST00000529199 A0A0G2JS52 829 aa29.17■■■□□ 2.26
CTSF-206ENST00000529199 MYT1Q01538 1121 aa29.17■■■□□ 2.26
CTSF-206ENST00000529199 WASLO00401 505 aaPredicted RBP29.16■■■□□ 2.26
CTSF-206ENST00000529199 SF3B2Q13435 895 aaKnown RBP29.16■■■□□ 2.26
CTSF-206ENST00000529199 ADGRB1O14514 1584 aa29.16■■■□□ 2.26
CTSF-206ENST00000529199 PRR36Q9H6K5 1346 aa29.16■■■□□ 2.26
CTSF-206ENST00000529199 BLMP54132 1417 aaPredicted RBP29.15■■■□□ 2.26
CTSF-206ENST00000529199 NGDNQ8NEJ9 315 aaKnown RBP29.15■■■□□ 2.26
CTSF-206ENST00000529199 ONECUT3O60422 494 aaPredicted RBP29.14■■■□□ 2.26
CTSF-206ENST00000529199 PAK3O75914 559 aaPredicted RBP29.14■■■□□ 2.26
CTSF-206ENST00000529199 KRT27Q7Z3Y8 459 aa29.14■■■□□ 2.26
CTSF-206ENST00000529199 DEFB132Q7Z7B7 95 aa29.14■■■□□ 2.26
CTSF-206ENST00000529199 EIF3AQ14152 1382 aaKnown RBP29.13■■■□□ 2.25
CTSF-206ENST00000529199 BTG4Q9NY30 223 aa29.13■■■□□ 2.25
CTSF-206ENST00000529199 STAC3Q96MF2 364 aa29.12■■■□□ 2.25
CTSF-206ENST00000529199 ADGRB2O60241 1585 aa29.09■■■□□ 2.25
CTSF-206ENST00000529199 FAM98CQ17RN3 349 aaKnown RBP29.09■■■□□ 2.25
CTSF-206ENST00000529199 PLCH1Q4KWH8 1693 aa29.08■■■□□ 2.25
CTSF-206ENST00000529199 BRWD3Q6RI45 1802 aa29.06■■■□□ 2.24
CTSF-206ENST00000529199 TULP4Q9NRJ4 1543 aa29.06■■■□□ 2.24
CTSF-206ENST00000529199 NWD2Q9ULI1 1742 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms