RNA–Protein interactions for RNA: ENST00000528846.5

COLCA2-203, Transcript of colorectal cancer associated 2, humanhuman

TSL 3

Gene COLCA2, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-203ENST00000528846 SOS2Q07890 1332 aaPredicted RBP29.05■■■□□ 2.24
COLCA2-203ENST00000528846 ESCO1Q5FWF5 840 aa29.05■■■□□ 2.24
COLCA2-203ENST00000528846 AFF2P51816 1311 aa29.03■■■□□ 2.24
COLCA2-203ENST00000528846 C14orf93Q9H972 538 aaKnown RBP29.03■■■□□ 2.24
COLCA2-203ENST00000528846 TECPR2O15040 1411 aa29.02■■■□□ 2.24
COLCA2-203ENST00000528846 C8orf37Q96NL8 207 aa29.01■■■□□ 2.23
COLCA2-203ENST00000528846 NUTM2FA1L443 756 aa29■■■□□ 2.23
COLCA2-203ENST00000528846 RXRBP28702 533 aa29■■■□□ 2.23
COLCA2-203ENST00000528846 CFAP70Q5T0N1 1121 aa29■■■□□ 2.23
COLCA2-203ENST00000528846 PLEKHH1Q9ULM0 1364 aa29■■■□□ 2.23
COLCA2-203ENST00000528846 ADAMTS2O95450 1211 aa28.99■■■□□ 2.23
COLCA2-203ENST00000528846 YTHDC2Q9H6S0 1430 aaKnown RBP28.99■■■□□ 2.23
COLCA2-203ENST00000528846 IFT172Q9UG01 1749 aa28.98■■■□□ 2.23
COLCA2-203ENST00000528846 NPHP3Q7Z494 1330 aa28.96■■■□□ 2.23
COLCA2-203ENST00000528846 FOXO3O43524 673 aa28.96■■■□□ 2.23
COLCA2-203ENST00000528846 SIRT1Q96EB6 747 aa28.96■■■□□ 2.23
COLCA2-203ENST00000528846 CDC42BPGQ6DT37 1551 aa28.95■■■□□ 2.22
COLCA2-203ENST00000528846 DHX57Q6P158 1386 aaKnown RBP28.94■■■□□ 2.22
COLCA2-203ENST00000528846 NGLY1Q96IV0 654 aa28.94■■■□□ 2.22
COLCA2-203ENST00000528846 XPCQ01831 940 aaPredicted RBP28.93■■■□□ 2.22
COLCA2-203ENST00000528846 LAMC1P11047 1609 aa28.93■■■□□ 2.22
COLCA2-203ENST00000528846 NRXN1Q9ULB1 1477 aa28.92■■■□□ 2.22
COLCA2-203ENST00000528846 QTRT2Q9H974 415 aaKnown RBP28.92■■■□□ 2.22
COLCA2-203ENST00000528846 MYOM2P54296 1465 aa28.91■■■□□ 2.22
COLCA2-203ENST00000528846 HRCP23327 699 aa28.91■■■□□ 2.22
COLCA2-203ENST00000528846 PRAM1Q96QH2 718 aa28.88■■■□□ 2.21
COLCA2-203ENST00000528846 KDM2AQ9Y2K7 1162 aa28.88■■■□□ 2.21
COLCA2-203ENST00000528846 SAFB2Q14151 953 aaKnown RBP eCLIP28.87■■■□□ 2.21
COLCA2-203ENST00000528846 TRIM26Q12899 539 aaPredicted RBP28.86■■■□□ 2.21
COLCA2-203ENST00000528846 RBM6P78332 1123 aaKnown RBP28.85■■■□□ 2.21
COLCA2-203ENST00000528846 DCAF11Q8TEB1 546 aa28.85■■■□□ 2.21
COLCA2-203ENST00000528846 KNDC1Q76NI1 1749 aa28.85■■■□□ 2.21
COLCA2-203ENST00000528846 POGKQ9P215 609 aa28.84■■■□□ 2.21
COLCA2-203ENST00000528846 PXDNQ92626 1479 aa28.84■■■□□ 2.21
COLCA2-203ENST00000528846 USP21Q9UK80 565 aa28.83■■■□□ 2.21
COLCA2-203ENST00000528846 UPF1Q92900 1129 aaKnown RBP eCLIP28.82■■■□□ 2.2
COLCA2-203ENST00000528846 CDK12Q9NYV4 1490 aaPredicted RBP28.81■■■□□ 2.2
COLCA2-203ENST00000528846 KRT28Q7Z3Y7 464 aa28.8■■■□□ 2.2
COLCA2-203ENST00000528846 FNBP4Q8N3X1 1017 aaPredicted RBP28.8■■■□□ 2.2
COLCA2-203ENST00000528846 PHF8Q9UPP1 1060 aa28.79■■■□□ 2.2
COLCA2-203ENST00000528846 TRAK1Q9UPV9 953 aa28.79■■■□□ 2.2
COLCA2-203ENST00000528846 STAC3Q96MF2 364 aa28.77■■■□□ 2.2
COLCA2-203ENST00000528846 SPATA31A3Q5VYP0 1347 aa28.76■■■□□ 2.19
COLCA2-203ENST00000528846 TRPC5Q9UL62 973 aaPredicted RBP28.76■■■□□ 2.19
COLCA2-203ENST00000528846 FMN2Q9NZ56 1722 aa28.74■■■□□ 2.19
COLCA2-203ENST00000528846 COL22A1Q8NFW1 1626 aaPredicted RBP28.74■■■□□ 2.19
COLCA2-203ENST00000528846 PSME1Q06323 249 aa28.73■■■□□ 2.19
COLCA2-203ENST00000528846 RGS12O14924 1447 aa28.72■■■□□ 2.19
COLCA2-203ENST00000528846 HIRIP3Q9BW71 556 aaPredicted RBP28.72■■■□□ 2.19
COLCA2-203ENST00000528846 DLC1Q96QB1 1528 aa28.72■■■□□ 2.19
COLCA2-203ENST00000528846 ADGRB1O14514 1584 aa28.71■■■□□ 2.19
COLCA2-203ENST00000528846 MINK1Q8N4C8 1332 aaPredicted RBP28.69■■■□□ 2.18
COLCA2-203ENST00000528846 PMFBP1Q8TBY8 1022 aa28.69■■■□□ 2.18
COLCA2-203ENST00000528846 KIF1AQ12756 1690 aa28.67■■■□□ 2.18
COLCA2-203ENST00000528846 PLEKHG5O94827 1062 aa28.66■■■□□ 2.18
COLCA2-203ENST00000528846 LMOD2Q6P5Q4 547 aa28.66■■■□□ 2.18
COLCA2-203ENST00000528846 ATRNO75882 1429 aa28.66■■■□□ 2.18
COLCA2-203ENST00000528846 HAP1P54257 671 aaPredicted RBP28.65■■■□□ 2.18
COLCA2-203ENST00000528846 BCL9LQ86UU0 1499 aa28.65■■■□□ 2.18
COLCA2-203ENST00000528846 ANKARQ7Z5J8 1434 aa28.64■■■□□ 2.18
COLCA2-203ENST00000528846 CABLES1Q8TDN4 633 aa28.63■■■□□ 2.17
COLCA2-203ENST00000528846 SBNO1A3KN83 1393 aa28.62■■■□□ 2.17
COLCA2-203ENST00000528846 TNS3Q68CZ2 1445 aa28.62■■■□□ 2.17
COLCA2-203ENST00000528846 WASLO00401 505 aaPredicted RBP28.62■■■□□ 2.17
COLCA2-203ENST00000528846 GJD4Q96KN9 370 aaPredicted RBP28.6■■■□□ 2.17
COLCA2-203ENST00000528846 UNC5CLQ8IV45 518 aa28.59■■■□□ 2.17
COLCA2-203ENST00000528846 PRR36Q9H6K5 1346 aa28.59■■■□□ 2.17
COLCA2-203ENST00000528846 EIF3AQ14152 1382 aaKnown RBP28.59■■■□□ 2.17
COLCA2-203ENST00000528846 ADGRB2O60241 1585 aa28.58■■■□□ 2.17
COLCA2-203ENST00000528846 RGPD8O14715 1765 aaPredicted RBP28.57■■■□□ 2.16
COLCA2-203ENST00000528846 ARHGEF10O15013 1369 aa28.57■■■□□ 2.16
COLCA2-203ENST00000528846 ATAD2Q6PL18 1390 aa28.55■■■□□ 2.16
COLCA2-203ENST00000528846 USP32Q8NFA0 1604 aa28.54■■■□□ 2.16
COLCA2-203ENST00000528846 GPRASP1Q5JY77 1395 aa28.54■■■□□ 2.16
COLCA2-203ENST00000528846 SLIT2O94813 1529 aa28.53■■■□□ 2.16
COLCA2-203ENST00000528846 NGDNQ8NEJ9 315 aaKnown RBP28.53■■■□□ 2.16
COLCA2-203ENST00000528846 TULP4Q9NRJ4 1543 aa28.51■■■□□ 2.15
COLCA2-203ENST00000528846 MARF1Q9Y4F3 1742 aaKnown RBP28.5■■■□□ 2.15
COLCA2-203ENST00000528846 NUDT16Q96DE0 195 aaKnown RBP28.5■■■□□ 2.15
COLCA2-203ENST00000528846 NBPF1Q3BBV0 1214 aa28.49■■■□□ 2.15
COLCA2-203ENST00000528846 FAM83GA6ND36 823 aa28.48■■■□□ 2.15
COLCA2-203ENST00000528846 PAK3O75914 559 aaPredicted RBP28.48■■■□□ 2.15
COLCA2-203ENST00000528846 CDK19Q9BWU1 502 aa28.48■■■□□ 2.15
COLCA2-203ENST00000528846 PCGF6Q9BYE7 350 aa28.47■■■□□ 2.15
COLCA2-203ENST00000528846 RALGAPBQ86X10 1494 aa28.46■■■□□ 2.15
COLCA2-203ENST00000528846 VPS72Q15906 364 aa28.45■■■□□ 2.14
COLCA2-203ENST00000528846 CCDC9Q9Y3X0 531 aaKnown RBP28.45■■■□□ 2.14
COLCA2-203ENST00000528846 ARHGEF28Q8N1W1 1705 aaKnown RBP28.4■■■□□ 2.14
COLCA2-203ENST00000528846 CCDC61Q9Y6R9 512 aa28.4■■■□□ 2.14
COLCA2-203ENST00000528846 ATP7BP35670 1465 aa28.4■■■□□ 2.14
COLCA2-203ENST00000528846 SEPT12Q8IYM1 358 aa28.39■■■□□ 2.14
COLCA2-203ENST00000528846 L3MBTL2Q969R5 705 aa28.39■■■□□ 2.14
COLCA2-203ENST00000528846 SIN3AQ96ST3 1273 aa28.39■■■□□ 2.14
COLCA2-203ENST00000528846 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.39■■■□□ 2.14
COLCA2-203ENST00000528846 GLI3P10071 1580 aa28.38■■■□□ 2.13
COLCA2-203ENST00000528846 BTG4Q9NY30 223 aa28.38■■■□□ 2.13
COLCA2-203ENST00000528846 TRPM3Q9HCF6 1732 aaPredicted RBP28.38■■■□□ 2.13
COLCA2-203ENST00000528846 CCDC125Q86Z20 511 aa28.37■■■□□ 2.13
COLCA2-203ENST00000528846 ACEP12821 1306 aa28.36■■■□□ 2.13
COLCA2-203ENST00000528846 ONECUT3O60422 494 aaPredicted RBP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms