RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-211ENST00000528840 ADGRF5Q8IZF2 1346 aa17.02■□□□□ 0.32
PTP4A2-211ENST00000528840 NUTM2FA1L443 756 aa17.02■□□□□ 0.32
PTP4A2-211ENST00000528840 WAPLQ7Z5K2 1190 aa17.02■□□□□ 0.32
PTP4A2-211ENST00000528840 PTCH1Q13635 1447 aa17.02■□□□□ 0.31
PTP4A2-211ENST00000528840 FOXO3O43524 673 aa17.01■□□□□ 0.31
PTP4A2-211ENST00000528840 XPCQ01831 940 aaPredicted RBP17■□□□□ 0.31
PTP4A2-211ENST00000528840 TMEM132EQ6IEE7 984 aa17■□□□□ 0.31
PTP4A2-211ENST00000528840 MPHOSPH9Q99550 1183 aa17■□□□□ 0.31
PTP4A2-211ENST00000528840 TRPC5Q9UL62 973 aaPredicted RBP17■□□□□ 0.31
PTP4A2-211ENST00000528840 FNBP4Q8N3X1 1017 aaPredicted RBP16.99■□□□□ 0.31
PTP4A2-211ENST00000528840 RGS12O14924 1447 aa16.98■□□□□ 0.31
PTP4A2-211ENST00000528840 NPHP3Q7Z494 1330 aa16.97■□□□□ 0.31
PTP4A2-211ENST00000528840 CCDC144AA2RUR9 1427 aa16.95■□□□□ 0.3
PTP4A2-211ENST00000528840 PPLO60437 1756 aa16.94■□□□□ 0.3
PTP4A2-211ENST00000528840 PRAG1Q86YV5 1406 aa16.94■□□□□ 0.3
PTP4A2-211ENST00000528840 LAMC1P11047 1609 aa16.93■□□□□ 0.3
PTP4A2-211ENST00000528840 LRPPRCP42704 1394 aaKnown RBP16.92■□□□□ 0.3
PTP4A2-211ENST00000528840 ANKRD30BQ9BXX2 1392 aa16.92■□□□□ 0.3
PTP4A2-211ENST00000528840 ABCC11Q96J66 1382 aa16.91■□□□□ 0.3
PTP4A2-211ENST00000528840 PLEKHH1Q9ULM0 1364 aa16.91■□□□□ 0.3
PTP4A2-211ENST00000528840 KRT28Q7Z3Y7 464 aa16.91■□□□□ 0.3
PTP4A2-211ENST00000528840 ATAD2Q6PL18 1390 aa16.9■□□□□ 0.3
PTP4A2-211ENST00000528840 SPATA31E1Q6ZUB1 1445 aa16.9■□□□□ 0.3
PTP4A2-211ENST00000528840 GJD4Q96KN9 370 aaPredicted RBP16.9■□□□□ 0.3
PTP4A2-211ENST00000528840 PLEKHG5O94827 1062 aa16.89■□□□□ 0.29
PTP4A2-211ENST00000528840 C14orf93Q9H972 538 aaKnown RBP16.89■□□□□ 0.29
PTP4A2-211ENST00000528840 ATRNO75882 1429 aa16.88■□□□□ 0.29
PTP4A2-211ENST00000528840 PXDNQ92626 1479 aa16.88■□□□□ 0.29
PTP4A2-211ENST00000528840 CFAP70Q5T0N1 1121 aa16.88■□□□□ 0.29
PTP4A2-211ENST00000528840 SIRT1Q96EB6 747 aa16.88■□□□□ 0.29
PTP4A2-211ENST00000528840 BCL9LQ86UU0 1499 aa16.87■□□□□ 0.29
PTP4A2-211ENST00000528840 SPATA31A3Q5VYP0 1347 aa16.87■□□□□ 0.29
PTP4A2-211ENST00000528840 MYOM2P54296 1465 aa16.86■□□□□ 0.29
PTP4A2-211ENST00000528840 CDC42BPGQ6DT37 1551 aa16.86■□□□□ 0.29
PTP4A2-211ENST00000528840 SAFB2Q14151 953 aaKnown RBP eCLIP16.86■□□□□ 0.299e-10■□□□□ 9.7
PTP4A2-211ENST00000528840 TECPR2O15040 1411 aa16.86■□□□□ 0.29
PTP4A2-211ENST00000528840 YTHDC2Q9H6S0 1430 aaKnown RBP16.86■□□□□ 0.29
PTP4A2-211ENST00000528840 COL22A1Q8NFW1 1626 aaPredicted RBP16.85■□□□□ 0.29
PTP4A2-211ENST00000528840 HAP1P54257 671 aaPredicted RBP16.85■□□□□ 0.29
PTP4A2-211ENST00000528840 PSME1Q06323 249 aa16.85■□□□□ 0.29
PTP4A2-211ENST00000528840 UNC5CLQ8IV45 518 aa16.85■□□□□ 0.29
PTP4A2-211ENST00000528840 PHF8Q9UPP1 1060 aa16.85■□□□□ 0.29
PTP4A2-211ENST00000528840 LMOD2Q6P5Q4 547 aa16.84■□□□□ 0.29
PTP4A2-211ENST00000528840 CCDC125Q86Z20 511 aa16.84■□□□□ 0.29
PTP4A2-211ENST00000528840 CABLES1Q8TDN4 633 aa16.84■□□□□ 0.29
PTP4A2-211ENST00000528840 DHX57Q6P158 1386 aaKnown RBP16.84■□□□□ 0.29
PTP4A2-211ENST00000528840 PIK3C2GO75747 1445 aa16.83■□□□□ 0.28
PTP4A2-211ENST00000528840 PRAM1Q96QH2 718 aa16.83■□□□□ 0.28
PTP4A2-211ENST00000528840 ZRANB1Q9UGI0 708 aa16.83■□□□□ 0.28
PTP4A2-211ENST00000528840 POGKQ9P215 609 aa16.82■□□□□ 0.28
PTP4A2-211ENST00000528840 ACIN1Q9UKV3 1341 aaKnown RBP16.81■□□□□ 0.28
PTP4A2-211ENST00000528840 PMFBP1Q8TBY8 1022 aa16.8■□□□□ 0.28
PTP4A2-211ENST00000528840 KDM2AQ9Y2K7 1162 aa16.79■□□□□ 0.28
PTP4A2-211ENST00000528840 CCDC9Q9Y3X0 531 aaKnown RBP16.79■□□□□ 0.28
PTP4A2-211ENST00000528840 IFT172Q9UG01 1749 aa16.79■□□□□ 0.28
PTP4A2-211ENST00000528840 FMN2Q9NZ56 1722 aa16.77■□□□□ 0.28
PTP4A2-211ENST00000528840 SEPT12Q8IYM1 358 aa16.77■□□□□ 0.28
PTP4A2-211ENST00000528840 TRAK1Q9UPV9 953 aa16.77■□□□□ 0.28
PTP4A2-211ENST00000528840 MARF1Q9Y4F3 1742 aaKnown RBP16.76■□□□□ 0.27
PTP4A2-211ENST00000528840 RALGAPBQ86X10 1494 aa16.76■□□□□ 0.27
PTP4A2-211ENST00000528840 FAM83GA6ND36 823 aa16.76■□□□□ 0.27
PTP4A2-211ENST00000528840 VPS72Q15906 364 aa16.76■□□□□ 0.27
PTP4A2-211ENST00000528840 KNDC1Q76NI1 1749 aa16.76■□□□□ 0.27
PTP4A2-211ENST00000528840 SLIT2O94813 1529 aa16.75■□□□□ 0.27
PTP4A2-211ENST00000528840 RGPD8O14715 1765 aaPredicted RBP16.75■□□□□ 0.27
PTP4A2-211ENST00000528840 HIRIP3Q9BW71 556 aaPredicted RBP16.75■□□□□ 0.27
PTP4A2-211ENST00000528840 SBNO1A3KN83 1393 aa16.74■□□□□ 0.27
PTP4A2-211ENST00000528840 TNS3Q68CZ2 1445 aa16.73■□□□□ 0.27
PTP4A2-211ENST00000528840 KIF1AQ12756 1690 aa16.73■□□□□ 0.27
PTP4A2-211ENST00000528840 SF3B2Q13435 895 aaKnown RBP16.73■□□□□ 0.27
PTP4A2-211ENST00000528840 DEFB132Q7Z7B7 95 aa16.73■□□□□ 0.27
PTP4A2-211ENST00000528840 DCAF11Q8TEB1 546 aa16.73■□□□□ 0.27
PTP4A2-211ENST00000528840 NRXN1Q9ULB1 1477 aa16.73■□□□□ 0.27
PTP4A2-211ENST00000528840 MINK1Q8N4C8 1332 aaPredicted RBP16.72■□□□□ 0.27
PTP4A2-211ENST00000528840 ONECUT3O60422 494 aaPredicted RBP16.72■□□□□ 0.27
PTP4A2-211ENST00000528840 A0A0G2JS52 829 aa16.71■□□□□ 0.27
PTP4A2-211ENST00000528840 MYT1Q01538 1121 aa16.71■□□□□ 0.27
PTP4A2-211ENST00000528840 KRT27Q7Z3Y8 459 aa16.71■□□□□ 0.27
PTP4A2-211ENST00000528840 ARHGEF10O15013 1369 aa16.71■□□□□ 0.27
PTP4A2-211ENST00000528840 RAB3GAP2Q9H2M9 1393 aa16.71■□□□□ 0.27
PTP4A2-211ENST00000528840 GLI3P10071 1580 aa16.71■□□□□ 0.27
PTP4A2-211ENST00000528840 NGDNQ8NEJ9 315 aaKnown RBP16.69■□□□□ 0.26
PTP4A2-211ENST00000528840 BTG4Q9NY30 223 aa16.69■□□□□ 0.26
PTP4A2-211ENST00000528840 BLMP54132 1417 aaPredicted RBP16.69■□□□□ 0.26
PTP4A2-211ENST00000528840 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.68■□□□□ 0.26
PTP4A2-211ENST00000528840 GPRASP1Q5JY77 1395 aa16.68■□□□□ 0.26
PTP4A2-211ENST00000528840 USP32Q8NFA0 1604 aa16.68■□□□□ 0.26
PTP4A2-211ENST00000528840 WASLO00401 505 aaPredicted RBP16.68■□□□□ 0.26
PTP4A2-211ENST00000528840 PAK3O75914 559 aaPredicted RBP16.68■□□□□ 0.26
PTP4A2-211ENST00000528840 PRR36Q9H6K5 1346 aa16.68■□□□□ 0.26
PTP4A2-211ENST00000528840 FAM98CQ17RN3 349 aaKnown RBP16.67■□□□□ 0.26
PTP4A2-211ENST00000528840 ANKARQ7Z5J8 1434 aa16.66■□□□□ 0.26
PTP4A2-211ENST00000528840 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
PTP4A2-211ENST00000528840 BRWD3Q6RI45 1802 aa16.65■□□□□ 0.26
PTP4A2-211ENST00000528840 STAC3Q96MF2 364 aa16.64■□□□□ 0.25
PTP4A2-211ENST00000528840 NUDT16Q96DE0 195 aaKnown RBP16.63■□□□□ 0.25
PTP4A2-211ENST00000528840 FAM182BQ5T319 152 aa16.62■□□□□ 0.25
PTP4A2-211ENST00000528840 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
PTP4A2-211ENST00000528840 ADGRB1O14514 1584 aa16.62■□□□□ 0.25
PTP4A2-211ENST00000528840 EIF3AQ14152 1382 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms