RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 PRR20AP86496 221 aa6.75□□□□□ -1.33
BRCA2-203ENST00000528762 REPIN1Q9BWE0 567 aaKnown RBP6.75□□□□□ -1.33
BRCA2-203ENST00000528762 GRIPAP1Q4V328 841 aa6.74□□□□□ -1.33
BRCA2-203ENST00000528762 HOXA2O43364 376 aa6.73□□□□□ -1.33
BRCA2-203ENST00000528762 DGAT1O75907 488 aa6.73□□□□□ -1.33
BRCA2-203ENST00000528762 MSS51Q4VC12 460 aa6.73□□□□□ -1.33
BRCA2-203ENST00000528762 CCDC24Q8N4L8 307 aa6.73□□□□□ -1.33
BRCA2-203ENST00000528762 KRI1Q8N9T8 703 aaKnown RBP6.73□□□□□ -1.33
BRCA2-203ENST00000528762 GPCPD1Q9NPB8 672 aa6.73□□□□□ -1.33
BRCA2-203ENST00000528762 RPIAP49247 311 aa6.72□□□□□ -1.33
BRCA2-203ENST00000528762 Q3C1V9 767 aa6.72□□□□□ -1.33
BRCA2-203ENST00000528762 USB1Q9BQ65 265 aaKnown RBP6.72□□□□□ -1.33
BRCA2-203ENST00000528762 FAM217BQ9NTX9 383 aaPredicted RBP6.72□□□□□ -1.33
BRCA2-203ENST00000528762 SALL2Q9Y467 1007 aaPredicted RBP6.72□□□□□ -1.33
BRCA2-203ENST00000528762 ZBTB24O43167 697 aaPredicted RBP6.71□□□□□ -1.34
BRCA2-203ENST00000528762 CD2BP2O95400 341 aaKnown RBP6.71□□□□□ -1.34
BRCA2-203ENST00000528762 CLCN1P35523 988 aa6.71□□□□□ -1.34
BRCA2-203ENST00000528762 NUTM1Q86Y26 1132 aa6.7□□□□□ -1.34
BRCA2-203ENST00000528762 CYP4X1Q8N118 509 aa6.7□□□□□ -1.34
BRCA2-203ENST00000528762 DACH1Q9UI36 760 aa6.7□□□□□ -1.34
BRCA2-203ENST00000528762 TIMELESSQ9UNS1 1208 aa6.7□□□□□ -1.34
BRCA2-203ENST00000528762 MMP16P51512 607 aa6.69□□□□□ -1.34
BRCA2-203ENST00000528762 TRIM32Q13049 653 aa6.69□□□□□ -1.34
BRCA2-203ENST00000528762 TTLL12Q14166 644 aaPredicted RBP6.69□□□□□ -1.34
BRCA2-203ENST00000528762 ZNF775Q96BV0 537 aaPredicted RBP6.69□□□□□ -1.34
BRCA2-203ENST00000528762 AAASQ9NRG9 546 aa6.69□□□□□ -1.34
BRCA2-203ENST00000528762 GTF3C3Q9Y5Q9 886 aa6.69□□□□□ -1.34
BRCA2-203ENST00000528762 TTC24A2A3L6 582 aaPredicted RBP6.68□□□□□ -1.34
BRCA2-203ENST00000528762 DXOO77932 396 aaKnown RBP6.68□□□□□ -1.34
BRCA2-203ENST00000528762 NDUFV2P19404 249 aa6.68□□□□□ -1.34
BRCA2-203ENST00000528762 SSTR3P32745 418 aaPredicted RBP6.68□□□□□ -1.34
BRCA2-203ENST00000528762 USP46P62068 366 aa6.68□□□□□ -1.34
BRCA2-203ENST00000528762 ZC3H15Q8WU90 426 aaKnown RBP6.68□□□□□ -1.34
BRCA2-203ENST00000528762 TOR4AQ9NXH8 423 aa6.68□□□□□ -1.34
BRCA2-203ENST00000528762 PCDHGC3Q9UN70 934 aa6.68□□□□□ -1.34
BRCA2-203ENST00000528762 TMEM132AQ24JP5 1023 aa6.67□□□□□ -1.34
BRCA2-203ENST00000528762 MRGPRX2Q96LB1 330 aa6.67□□□□□ -1.34
BRCA2-203ENST00000528762 C6orf229H3BNL8 230 aa6.66□□□□□ -1.34
BRCA2-203ENST00000528762 ZMYND10O75800 440 aa6.66□□□□□ -1.34
BRCA2-203ENST00000528762 FDX1P10109 184 aa6.66□□□□□ -1.34
BRCA2-203ENST00000528762 BARGINQ6ZT62 677 aa6.66□□□□□ -1.34
BRCA2-203ENST00000528762 J3QL48 77 aa6.65□□□□□ -1.34
BRCA2-203ENST00000528762 JUNDP17535 347 aa6.65□□□□□ -1.34
BRCA2-203ENST00000528762 SKOR1P84550 965 aa6.65□□□□□ -1.34
BRCA2-203ENST00000528762 PTCRAQ6ISU1 281 aaPredicted RBP6.65□□□□□ -1.34
BRCA2-203ENST00000528762 GIGYF2Q6Y7W6 1299 aaKnown RBP6.65□□□□□ -1.34
BRCA2-203ENST00000528762 SPIRE2Q8WWL2 714 aa6.65□□□□□ -1.34
BRCA2-203ENST00000528762 MOXD2PA6NHM9 499 aa6.64□□□□□ -1.35
BRCA2-203ENST00000528762 SMPD1P17405 629 aa6.64□□□□□ -1.35
BRCA2-203ENST00000528762 GMPR2Q9P2T1 348 aaKnown RBP6.64□□□□□ -1.35
BRCA2-203ENST00000528762 WNT7AO00755 349 aa6.63□□□□□ -1.35
BRCA2-203ENST00000528762 AXIN1O15169 862 aa6.63□□□□□ -1.35
BRCA2-203ENST00000528762 RC3H1Q5TC82 1133 aaKnown RBP6.62□□□□□ -1.35
BRCA2-203ENST00000528762 RETREG3Q86VR2 466 aa6.62□□□□□ -1.35
BRCA2-203ENST00000528762 PARP9Q8IXQ6 854 aa6.62□□□□□ -1.35
BRCA2-203ENST00000528762 NUDT12Q9BQG2 462 aa6.62□□□□□ -1.35
BRCA2-203ENST00000528762 BEGAINQ9BUH8 593 aa6.62□□□□□ -1.35
BRCA2-203ENST00000528762 LINC01559Q495D7 138 aa6.61□□□□□ -1.35
BRCA2-203ENST00000528762 ERICH6Q7L0X2 663 aa6.61□□□□□ -1.35
BRCA2-203ENST00000528762 SNIP1Q8TAD8 396 aaKnown RBP6.61□□□□□ -1.35
BRCA2-203ENST00000528762 HPS1Q92902 700 aa6.61□□□□□ -1.35
BRCA2-203ENST00000528762 AVPP01185 164 aa6.6□□□□□ -1.35
BRCA2-203ENST00000528762 MS4A1P11836 297 aa6.6□□□□□ -1.35
BRCA2-203ENST00000528762 AMHR2Q16671 573 aa6.6□□□□□ -1.35
BRCA2-203ENST00000528762 CSPP1Q1MSJ5 1256 aa6.6□□□□□ -1.35
BRCA2-203ENST00000528762 TRIM66O15016 1216 aa6.59□□□□□ -1.35
BRCA2-203ENST00000528762 ALDH1A1P00352 501 aa6.59□□□□□ -1.35
BRCA2-203ENST00000528762 PRR7Q8TB68 274 aa6.59□□□□□ -1.35
BRCA2-203ENST00000528762 TBC1D2Q9BYX2 928 aa6.59□□□□□ -1.35
BRCA2-203ENST00000528762 PCDHB15Q9Y5E8 787 aa6.59□□□□□ -1.35
BRCA2-203ENST00000528762 C11orf95C9JLR9 678 aaPredicted RBP6.58□□□□□ -1.36
BRCA2-203ENST00000528762 CRIPAKQ8N1N5 446 aa6.58□□□□□ -1.36
BRCA2-203ENST00000528762 CCNYL3P0C7X3 344 aa6.57□□□□□ -1.36
BRCA2-203ENST00000528762 EHBP1Q8NDI1 1231 aa6.57□□□□□ -1.36
BRCA2-203ENST00000528762 CABLES1Q8TDN4 633 aa6.57□□□□□ -1.36
BRCA2-203ENST00000528762 SNRPBP14678 240 aaKnown RBP6.56□□□□□ -1.36
BRCA2-203ENST00000528762 WNT7BP56706 349 aa6.56□□□□□ -1.36
BRCA2-203ENST00000528762 SH3BP2P78314 561 aa6.56□□□□□ -1.36
BRCA2-203ENST00000528762 MTMR2Q13614 643 aa6.56□□□□□ -1.36
BRCA2-203ENST00000528762 UNC93B1Q9H1C4 597 aa6.56□□□□□ -1.36
BRCA2-203ENST00000528762 SLC24A3Q9HC58 644 aa6.56□□□□□ -1.36
BRCA2-203ENST00000528762 ATP13A2Q9NQ11 1180 aa6.56□□□□□ -1.36
BRCA2-203ENST00000528762 TLL2Q9Y6L7 1015 aa6.56□□□□□ -1.36
BRCA2-203ENST00000528762 CFAP99D6REC4 459 aa6.55□□□□□ -1.36
BRCA2-203ENST00000528762 CTHP32929 405 aa6.55□□□□□ -1.36
BRCA2-203ENST00000528762 BRPF1P55201 1214 aaPredicted RBP6.55□□□□□ -1.36
BRCA2-203ENST00000528762 CTC1Q2NKJ3 1217 aa6.55□□□□□ -1.36
BRCA2-203ENST00000528762 RSBN1LQ6PCB5 846 aaPredicted RBP6.55□□□□□ -1.36
BRCA2-203ENST00000528762 BAP1Q92560 729 aa6.55□□□□□ -1.36
BRCA2-203ENST00000528762 BMP1P13497 986 aa6.54□□□□□ -1.36
BRCA2-203ENST00000528762 SMCPP49901 116 aaPredicted RBP6.54□□□□□ -1.36
BRCA2-203ENST00000528762 TSC1Q92574 1164 aa6.54□□□□□ -1.36
BRCA2-203ENST00000528762 AK7Q96M32 723 aa6.54□□□□□ -1.36
BRCA2-203ENST00000528762 NEUROD2Q15784 382 aa6.53□□□□□ -1.36
BRCA2-203ENST00000528762 PTPRNQ16849 979 aa6.53□□□□□ -1.36
BRCA2-203ENST00000528762 MAP10Q9P2G4 905 aa6.53□□□□□ -1.36
BRCA2-203ENST00000528762 SIAH2O43255 324 aa6.52□□□□□ -1.37
BRCA2-203ENST00000528762 HRCP23327 699 aa6.52□□□□□ -1.37
BRCA2-203ENST00000528762 PDE4DQ08499 809 aa6.52□□□□□ -1.37
BRCA2-203ENST00000528762 KCNH2Q12809 1159 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms