RNA–Protein interactions for RNA: ENST00000528643.5

FDFT1-212, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-212ENST00000528643 ZFYVE9O95405 1425 aa11.41□□□□□ -0.58
FDFT1-212ENST00000528643 ARHGEF28Q8N1W1 1705 aaKnown RBP11.41□□□□□ -0.58
FDFT1-212ENST00000528643 PER1O15534 1290 aaPredicted RBP11.41□□□□□ -0.58
FDFT1-212ENST00000528643 KTN1Q86UP2 1357 aaKnown RBP11.4□□□□□ -0.58
FDFT1-212ENST00000528643 CNGB1Q14028 1251 aaPredicted RBP11.4□□□□□ -0.58
FDFT1-212ENST00000528643 SBNO2Q9Y2G9 1366 aa11.39□□□□□ -0.59
FDFT1-212ENST00000528643 MLECQ14165 292 aa11.39□□□□□ -0.59
FDFT1-212ENST00000528643 PARD3Q8TEW0 1356 aa11.39□□□□□ -0.59
FDFT1-212ENST00000528643 VGFO15240 615 aaPredicted RBP11.39□□□□□ -0.59
FDFT1-212ENST00000528643 NUTM2DQ5VT03 806 aaPredicted RBP11.39□□□□□ -0.59
FDFT1-212ENST00000528643 ASXL1Q8IXJ9 1541 aa11.39□□□□□ -0.59
FDFT1-212ENST00000528643 PANK3Q9H999 370 aa11.38□□□□□ -0.59
FDFT1-212ENST00000528643 HNRNPUQ00839 825 aaKnown RBP eCLIP11.37□□□□□ -0.59
FDFT1-212ENST00000528643 CDCA8Q53HL2 280 aa11.37□□□□□ -0.59
FDFT1-212ENST00000528643 RALBP1Q15311 655 aa11.37□□□□□ -0.59
FDFT1-212ENST00000528643 TMEM132EQ6IEE7 984 aa11.37□□□□□ -0.59
FDFT1-212ENST00000528643 FAM9BQ8IZU0 186 aa11.37□□□□□ -0.59
FDFT1-212ENST00000528643 A2ML1A8K2U0 1454 aa11.36□□□□□ -0.59
FDFT1-212ENST00000528643 MYBBP1AQ9BQG0 1328 aaKnown RBP11.36□□□□□ -0.59
FDFT1-212ENST00000528643 CENPJQ9HC77 1338 aaPredicted RBP11.36□□□□□ -0.59
FDFT1-212ENST00000528643 ZMYM3Q14202 1370 aa11.36□□□□□ -0.59
FDFT1-212ENST00000528643 NKX1-1Q15270 411 aaPredicted RBP11.35□□□□□ -0.59
FDFT1-212ENST00000528643 TRAK1Q9UPV9 953 aa11.35□□□□□ -0.59
FDFT1-212ENST00000528643 SETD1AO15047 1707 aaKnown RBP11.35□□□□□ -0.59
FDFT1-212ENST00000528643 ZNF692Q9BU19 519 aaPredicted RBP11.35□□□□□ -0.59
FDFT1-212ENST00000528643 BRD4O60885 1362 aaPredicted RBP11.34□□□□□ -0.59
FDFT1-212ENST00000528643 ALKQ9UM73 1620 aa11.33□□□□□ -0.6
FDFT1-212ENST00000528643 GTPBP6O43824 516 aaPredicted RBP11.32□□□□□ -0.6
FDFT1-212ENST00000528643 PNISRQ8TF01 805 aaKnown RBP11.32□□□□□ -0.6
FDFT1-212ENST00000528643 ESF1Q9H501 851 aaKnown RBP11.32□□□□□ -0.6
FDFT1-212ENST00000528643 UBR1Q8IWV7 1749 aa11.32□□□□□ -0.6
FDFT1-212ENST00000528643 FER1L4A9Z1Z3 1794 aa11.31□□□□□ -0.6
FDFT1-212ENST00000528643 NRXN3Q9Y4C0 1643 aa11.31□□□□□ -0.6
FDFT1-212ENST00000528643 TULP4Q9NRJ4 1543 aa11.31□□□□□ -0.6
FDFT1-212ENST00000528643 RIMS2Q9UQ26 1411 aa11.31□□□□□ -0.6
FDFT1-212ENST00000528643 CC2D1BQ5T0F9 858 aaKnown RBP11.31□□□□□ -0.6
FDFT1-212ENST00000528643 TMC1Q8TDI8 760 aa11.31□□□□□ -0.6
FDFT1-212ENST00000528643 LRPPRCP42704 1394 aaKnown RBP11.31□□□□□ -0.6
FDFT1-212ENST00000528643 NLRP13Q86W25 1043 aa11.31□□□□□ -0.6
FDFT1-212ENST00000528643 RNF25Q96BH1 459 aaPredicted RBP11.31□□□□□ -0.6
FDFT1-212ENST00000528643 ZBTB12Q9Y330 459 aaPredicted RBP11.31□□□□□ -0.6
FDFT1-212ENST00000528643 C3P01024 1663 aa11.3□□□□□ -0.6
FDFT1-212ENST00000528643 PTPRMP28827 1452 aa11.3□□□□□ -0.6
FDFT1-212ENST00000528643 TNRQ92752 1358 aa11.3□□□□□ -0.6
FDFT1-212ENST00000528643 ZBED9Q6R2W3 1325 aa11.3□□□□□ -0.6
FDFT1-212ENST00000528643 CAPN15O75808 1086 aa11.3□□□□□ -0.6
FDFT1-212ENST00000528643 KNSTRNQ9Y448 316 aa11.29□□□□□ -0.6
FDFT1-212ENST00000528643 YTHDC2Q9H6S0 1430 aaKnown RBP11.29□□□□□ -0.6
FDFT1-212ENST00000528643 NPC1L1Q9UHC9 1359 aa11.29□□□□□ -0.6
FDFT1-212ENST00000528643 USP32Q8NFA0 1604 aa11.26□□□□□ -0.61
FDFT1-212ENST00000528643 CARD14Q9BXL6 1004 aa11.26□□□□□ -0.61
FDFT1-212ENST00000528643 STK26Q9P289 416 aa11.26□□□□□ -0.61
FDFT1-212ENST00000528643 ZBTB47Q9UFB7 747 aaPredicted RBP11.26□□□□□ -0.61
FDFT1-212ENST00000528643 SUPT16HQ9Y5B9 1047 aaKnown RBP11.26□□□□□ -0.61
FDFT1-212ENST00000528643 DLC1Q96QB1 1528 aa11.25□□□□□ -0.61
FDFT1-212ENST00000528643 EVC2Q86UK5 1308 aa11.25□□□□□ -0.61
FDFT1-212ENST00000528643 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
FDFT1-212ENST00000528643 PUS7Q96PZ0 661 aaKnown RBP11.25□□□□□ -0.61
FDFT1-212ENST00000528643 KNDC1Q76NI1 1749 aa11.24□□□□□ -0.61
FDFT1-212ENST00000528643 SAFB2Q14151 953 aaKnown RBP eCLIP11.24□□□□□ -0.61
FDFT1-212ENST00000528643 NLRP1Q9C000 1473 aa11.24□□□□□ -0.61
FDFT1-212ENST00000528643 PPP2R1AP30153 589 aa11.23□□□□□ -0.61
FDFT1-212ENST00000528643 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.23□□□□□ -0.61
FDFT1-212ENST00000528643 SLC12A5Q9H2X9 1139 aa11.23□□□□□ -0.61
FDFT1-212ENST00000528643 TMEM2Q9UHN6 1383 aa11.23□□□□□ -0.61
FDFT1-212ENST00000528643 PRAM1Q96QH2 718 aa11.23□□□□□ -0.61
FDFT1-212ENST00000528643 NSD3Q9BZ95 1437 aa11.22□□□□□ -0.61
FDFT1-212ENST00000528643 ABCB7O75027 752 aa11.22□□□□□ -0.61
FDFT1-212ENST00000528643 CEBPAP49715 358 aaPredicted RBP11.22□□□□□ -0.61
FDFT1-212ENST00000528643 INSRP06213 1382 aa11.21□□□□□ -0.61
FDFT1-212ENST00000528643 CABP2Q9NPB3 220 aa11.21□□□□□ -0.62
FDFT1-212ENST00000528643 BLMP54132 1417 aaPredicted RBP11.21□□□□□ -0.62
FDFT1-212ENST00000528643 MINK1Q8N4C8 1332 aaPredicted RBP11.2□□□□□ -0.62
FDFT1-212ENST00000528643 METP08581 1390 aa11.2□□□□□ -0.62
FDFT1-212ENST00000528643 ANKRD36BQ8N2N9 1353 aa11.2□□□□□ -0.62
FDFT1-212ENST00000528643 ABCC11Q96J66 1382 aa11.2□□□□□ -0.62
FDFT1-212ENST00000528643 POGKQ9P215 609 aa11.2□□□□□ -0.62
FDFT1-212ENST00000528643 BRPF1P55201 1214 aaPredicted RBP11.19□□□□□ -0.62
FDFT1-212ENST00000528643 RIMS1Q86UR5 1692 aaKnown RBP11.19□□□□□ -0.62
FDFT1-212ENST00000528643 CPS1P31327 1500 aa11.19□□□□□ -0.62
FDFT1-212ENST00000528643 NINLQ9Y2I6 1382 aa11.19□□□□□ -0.62
FDFT1-212ENST00000528643 SENP3-EIF4A1A0A087X0R7 540 aa11.19□□□□□ -0.62
FDFT1-212ENST00000528643 SLIT1O75093 1534 aa11.19□□□□□ -0.62
FDFT1-212ENST00000528643 PLEKHH1Q9ULM0 1364 aa11.18□□□□□ -0.62
FDFT1-212ENST00000528643 TECPR2O15040 1411 aa11.18□□□□□ -0.62
FDFT1-212ENST00000528643 ADAMTS13Q76LX8 1427 aa11.18□□□□□ -0.62
FDFT1-212ENST00000528643 SMG6Q86US8 1419 aaKnown RBP11.18□□□□□ -0.62
FDFT1-212ENST00000528643 ARHGAP23Q9P227 1491 aa11.18□□□□□ -0.62
FDFT1-212ENST00000528643 ANKRD26Q9UPS8 1709 aa11.18□□□□□ -0.62
FDFT1-212ENST00000528643 HDGFP51858 240 aaKnown RBP11.18□□□□□ -0.62
FDFT1-212ENST00000528643 LMOD2Q6P5Q4 547 aa11.18□□□□□ -0.62
FDFT1-212ENST00000528643 PODXL2Q9NZ53 605 aa11.18□□□□□ -0.62
FDFT1-212ENST00000528643 ATAD2Q6PL18 1390 aa11.18□□□□□ -0.62
FDFT1-212ENST00000528643 CD163L1Q9NR16 1453 aa11.18□□□□□ -0.62
FDFT1-212ENST00000528643 PLEKHG1Q9ULL1 1385 aa11.17□□□□□ -0.62
FDFT1-212ENST00000528643 STK25O00506 426 aa11.17□□□□□ -0.62
FDFT1-212ENST00000528643 NEFLP07196 543 aa11.17□□□□□ -0.62
FDFT1-212ENST00000528643 LTKP29376 864 aa11.17□□□□□ -0.62
FDFT1-212ENST00000528643 SRPK2P78362 688 aaKnown RBP11.17□□□□□ -0.62
FDFT1-212ENST00000528643 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms