RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	PDE3A	Q14432	1141 aa		30.39	■■■□□ 2.46
GSDMD-208	ENST00000528475	PPM1G	O15355	546 aa	Predicted RBP	30.38	■■■□□ 2.45
GSDMD-208	ENST00000528475	BCAR3	O75815	825 aa		30.38	■■■□□ 2.45
GSDMD-208	ENST00000528475	MORC1	Q86VD1	984 aa		30.38	■■■□□ 2.45
GSDMD-208	ENST00000528475	WWC1	Q8IX03	1113 aa		30.38	■■■□□ 2.45
GSDMD-208	ENST00000528475	TRAK1	Q9UPV9	953 aa		30.38	■■■□□ 2.45
GSDMD-208	ENST00000528475	CHGA	P10645	457 aa	Known RBP	30.37	■■■□□ 2.45
GSDMD-208	ENST00000528475	DMRT2	Q9Y5R5	561 aa		30.37	■■■□□ 2.45
GSDMD-208	ENST00000528475	IQSEC2	Q5JU85	1478 aa		30.37	■■■□□ 2.45
GSDMD-208	ENST00000528475	CGNL1	Q0VF96	1302 aa		30.36	■■■□□ 2.45
GSDMD-208	ENST00000528475	NEO1	Q92859	1461 aa		30.35	■■■□□ 2.45
GSDMD-208	ENST00000528475	C8orf34	Q49A92	452 aa		30.35	■■■□□ 2.45
GSDMD-208	ENST00000528475	PIK3C2B	O00750	1634 aa		30.35	■■■□□ 2.45
GSDMD-208	ENST00000528475	CAMSAP1	Q5T5Y3	1602 aa		30.35	■■■□□ 2.45
GSDMD-208	ENST00000528475	RUNDC1	Q96C34	613 aa		30.34	■■■□□ 2.45
GSDMD-208	ENST00000528475	GLI2	P10070	1586 aa		30.33	■■■□□ 2.45
GSDMD-208	ENST00000528475	PHF23	Q9BUL5	403 aa	Predicted RBP	30.33	■■■□□ 2.45
GSDMD-208	ENST00000528475	SLC12A5	Q9H2X9	1139 aa		30.33	■■■□□ 2.45
GSDMD-208	ENST00000528475	NCBP3	Q53F19	620 aa	Known RBP	30.31	■■■□□ 2.44
GSDMD-208	ENST00000528475	GGT6	Q6P531	493 aa		30.31	■■■□□ 2.44
GSDMD-208	ENST00000528475	NSD2	O96028	1365 aa		30.3	■■■□□ 2.44
GSDMD-208	ENST00000528475	ARHGEF28	Q8N1W1	1705 aa	Known RBP	30.29	■■■□□ 2.44
GSDMD-208	ENST00000528475	SIGLEC1	Q9BZZ2	1709 aa		30.29	■■■□□ 2.44
GSDMD-208	ENST00000528475	CFAP65	Q6ZU64	1925 aa	Known RBP	30.29	■■■□□ 2.44
GSDMD-208	ENST00000528475	NEXMIF	Q5QGS0	1516 aa		30.28	■■■□□ 2.44
GSDMD-208	ENST00000528475	LAS1L	Q9Y4W2	734 aa	Known RBP	30.28	■■■□□ 2.44
GSDMD-208	ENST00000528475	TMEM132E	Q6IEE7	984 aa		30.27	■■■□□ 2.44
GSDMD-208	ENST00000528475	WDR63	Q8IWG1	891 aa		30.27	■■■□□ 2.44
GSDMD-208	ENST00000528475	TULP4	Q9NRJ4	1543 aa		30.26	■■■□□ 2.44
GSDMD-208	ENST00000528475	CCDC27	Q2M243	656 aa		30.26	■■■□□ 2.43
GSDMD-208	ENST00000528475	ANKRD36B	Q8N2N9	1353 aa		30.26	■■■□□ 2.43
GSDMD-208	ENST00000528475	NEFM	P07197	916 aa		30.26	■■■□□ 2.43
GSDMD-208	ENST00000528475	AAMP	Q13685	434 aa		30.25	■■■□□ 2.43
GSDMD-208	ENST00000528475	EVC2	Q86UK5	1308 aa		30.25	■■■□□ 2.43
GSDMD-208	ENST00000528475	ARHGAP31	Q2M1Z3	1444 aa		30.24	■■■□□ 2.43
GSDMD-208	ENST00000528475	VGF	O15240	615 aa	Predicted RBP	30.24	■■■□□ 2.43
GSDMD-208	ENST00000528475	CFAP53	Q96M91	514 aa		30.24	■■■□□ 2.43
GSDMD-208	ENST00000528475	TCP11L2	Q8N4U5	519 aa		30.23	■■■□□ 2.43
GSDMD-208	ENST00000528475	VIRMA	Q69YN4	1812 aa	Known RBP	30.23	■■■□□ 2.43
GSDMD-208	ENST00000528475	CLUAP1	Q96AJ1	413 aa		30.23	■■■□□ 2.43
GSDMD-208	ENST00000528475	ZFYVE9	O95405	1425 aa		30.21	■■■□□ 2.43
GSDMD-208	ENST00000528475	MTHFS	P49914	203 aa		30.21	■■■□□ 2.43
GSDMD-208	ENST00000528475	IGHD	P01880	384 aa		30.2	■■■□□ 2.43
GSDMD-208	ENST00000528475	RGS3	P49796	1198 aa		30.2	■■■□□ 2.43
GSDMD-208	ENST00000528475	RAPGEF3	O95398	923 aa		30.19	■■■□□ 2.42
GSDMD-208	ENST00000528475	DIP2C	Q9Y2E4	1556 aa		30.19	■■■□□ 2.42
GSDMD-208	ENST00000528475	RARS	P54136	660 aa	Known RBP	30.19	■■■□□ 2.42
GSDMD-208	ENST00000528475	TNNT2	P45379	298 aa	Predicted RBP	30.18	■■■□□ 2.42
GSDMD-208	ENST00000528475	ADGRB2	O60241	1585 aa		30.17	■■■□□ 2.42
GSDMD-208	ENST00000528475	CANX	P27824	592 aa	Known RBP	30.17	■■■□□ 2.42
GSDMD-208	ENST00000528475	MAPK8IP3	Q9UPT6	1336 aa		30.17	■■■□□ 2.42
GSDMD-208	ENST00000528475	FAM69C	Q0P6D2	419 aa		30.16	■■■□□ 2.42
GSDMD-208	ENST00000528475	PANK1	Q8TE04	598 aa		30.15	■■■□□ 2.42
GSDMD-208	ENST00000528475	COG6	Q9Y2V7	657 aa		30.15	■■■□□ 2.42
GSDMD-208	ENST00000528475	RRP7A	Q9Y3A4	280 aa	Known RBP	30.13	■■■□□ 2.41
GSDMD-208	ENST00000528475	DIP2B	Q9P265	1576 aa		30.13	■■■□□ 2.41
GSDMD-208	ENST00000528475	DAXX	Q9UER7	740 aa	Predicted RBP	30.13	■■■□□ 2.41
GSDMD-208	ENST00000528475	NEUROD2	Q15784	382 aa		30.12	■■■□□ 2.41
GSDMD-208	ENST00000528475	ZMYM3	Q14202	1370 aa		30.11	■■■□□ 2.41
GSDMD-208	ENST00000528475	PMFBP1	Q8TBY8	1022 aa		30.1	■■■□□ 2.41
GSDMD-208	ENST00000528475	RICTOR	Q6R327	1708 aa		30.1	■■■□□ 2.41
GSDMD-208	ENST00000528475	MYH16	Q9H6N6	1097 aa		30.1	■■■□□ 2.41
GSDMD-208	ENST00000528475	ABCC11	Q96J66	1382 aa		30.1	■■■□□ 2.41
GSDMD-208	ENST00000528475	SLC52A1	Q9NWF4	448 aa		30.08	■■■□□ 2.41
GSDMD-208	ENST00000528475	FRAT1	Q92837	279 aa	Predicted RBP	30.07	■■■□□ 2.4
GSDMD-208	ENST00000528475	CT47B1	P0C2W7	299 aa	Predicted RBP	30.05	■■■□□ 2.4
GSDMD-208	ENST00000528475	IDI1	Q13907	227 aa		30.05	■■■□□ 2.4
GSDMD-208	ENST00000528475	CABP2	Q9NPB3	220 aa		30.05	■■■□□ 2.4
GSDMD-208	ENST00000528475	MED14	O60244	1454 aa		30.05	■■■□□ 2.4
GSDMD-208	ENST00000528475	CLTC	Q00610	1675 aa	Known RBP	30.04	■■■□□ 2.4
GSDMD-208	ENST00000528475	SLC4A3	P48751	1232 aa		30.03	■■■□□ 2.4
GSDMD-208	ENST00000528475	ANKRD26	Q9UPS8	1709 aa		30.03	■■■□□ 2.4
GSDMD-208	ENST00000528475		A0A1W2PP64	1363 aa		30.03	■■■□□ 2.4
GSDMD-208	ENST00000528475	NFKBIB	Q15653	356 aa		30.03	■■■□□ 2.4
GSDMD-208	ENST00000528475	U2AF1L5	P0DN76	240 aa	Predicted RBP	30.02	■■■□□ 2.4
GSDMD-208	ENST00000528475	U2AF1	Q01081	240 aa	Known RBP eCLIP	30.02	■■■□□ 2.4
GSDMD-208	ENST00000528475	NUTM2D	Q5VT03	806 aa	Predicted RBP	30.02	■■■□□ 2.4
GSDMD-208	ENST00000528475	TMEM131L	A2VDJ0	1609 aa		30.02	■■■□□ 2.4
GSDMD-208	ENST00000528475	COL3A1	P02461	1466 aa	Predicted RBP	30.02	■■■□□ 2.4
GSDMD-208	ENST00000528475	USP19	O94966	1318 aa		30.02	■■■□□ 2.4
GSDMD-208	ENST00000528475	PTPRM	P28827	1452 aa		30.01	■■■□□ 2.4
GSDMD-208	ENST00000528475	ATAD2	Q6PL18	1390 aa		30.01	■■■□□ 2.39
GSDMD-208	ENST00000528475	PREX1	Q8TCU6	1659 aa		30	■■■□□ 2.39
GSDMD-208	ENST00000528475	RLBP1	P12271	317 aa		30	■■■□□ 2.39
GSDMD-208	ENST00000528475	PCDHB15	Q9Y5E8	787 aa		29.99	■■■□□ 2.39
GSDMD-208	ENST00000528475	MYO5B	Q9ULV0	1848 aa		29.97	■■■□□ 2.39
GSDMD-208	ENST00000528475	PLEKHF1	Q96S99	279 aa		29.97	■■■□□ 2.39
GSDMD-208	ENST00000528475	YEATS2	Q9ULM3	1422 aa		29.96	■■■□□ 2.39
GSDMD-208	ENST00000528475	TNN	Q9UQP3	1299 aa		29.95	■■■□□ 2.38
GSDMD-208	ENST00000528475	NLRP1	Q9C000	1473 aa		29.94	■■■□□ 2.38
GSDMD-208	ENST00000528475	RWDD1	Q9H446	243 aa	Predicted RBP	29.94	■■■□□ 2.38
GSDMD-208	ENST00000528475	CD163L1	Q9NR16	1453 aa		29.94	■■■□□ 2.38
GSDMD-208	ENST00000528475	MVP	Q14764	893 aa	Known RBP	29.93	■■■□□ 2.38
GSDMD-208	ENST00000528475	TERF2IP	Q9NYB0	399 aa		29.93	■■■□□ 2.38
GSDMD-208	ENST00000528475	TSPOAP1	O95153	1857 aa		29.93	■■■□□ 2.38
GSDMD-208	ENST00000528475	YTHDC2	Q9H6S0	1430 aa	Known RBP	29.92	■■■□□ 2.38
GSDMD-208	ENST00000528475	SRPK2	P78362	688 aa	Known RBP	29.92	■■■□□ 2.38
GSDMD-208	ENST00000528475	ZKSCAN2	Q63HK3	967 aa		29.92	■■■□□ 2.38
GSDMD-208	ENST00000528475	IL16	Q14005	1332 aa		29.92	■■■□□ 2.38
GSDMD-208	ENST00000528475	BCL2L13	Q9BXK5	485 aa		29.92	■■■□□ 2.38

Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms