RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 PIK3C2GO75747 1445 aa13.17□□□□□ -0.3
CMTM1-210ENST00000528441 NUTM2FA1L443 756 aa13.17□□□□□ -0.3
CMTM1-210ENST00000528441 SAFB2Q14151 953 aaKnown RBP eCLIP13.17□□□□□ -0.3
CMTM1-210ENST00000528441 CFAP70Q5T0N1 1121 aa13.17□□□□□ -0.3
CMTM1-210ENST00000528441 BRINP3Q76B58 766 aa13.17□□□□□ -0.3
CMTM1-210ENST00000528441 POGKQ9P215 609 aa13.17□□□□□ -0.3
CMTM1-210ENST00000528441 MYOM2P54296 1465 aa13.16□□□□□ -0.3
CMTM1-210ENST00000528441 MST1RQ04912 1400 aa13.16□□□□□ -0.3
CMTM1-210ENST00000528441 NUTM2BA6NNL0 878 aaPredicted RBP13.16□□□□□ -0.3
CMTM1-210ENST00000528441 NUTM2EB1AL46 878 aaPredicted RBP13.16□□□□□ -0.3
CMTM1-210ENST00000528441 WAPLQ7Z5K2 1190 aa13.16□□□□□ -0.3
CMTM1-210ENST00000528441 NUTM2AQ8IVF1 878 aaPredicted RBP13.16□□□□□ -0.3
CMTM1-210ENST00000528441 ASXL1Q8IXJ9 1541 aa13.16□□□□□ -0.3
CMTM1-210ENST00000528441 LRPPRCP42704 1394 aaKnown RBP13.16□□□□□ -0.3
CMTM1-210ENST00000528441 YTHDC2Q9H6S0 1430 aaKnown RBP13.15□□□□□ -0.3
CMTM1-210ENST00000528441 KNDC1Q76NI1 1749 aa13.14□□□□□ -0.31
CMTM1-210ENST00000528441 ZBTB22O15209 634 aa13.14□□□□□ -0.31
CMTM1-210ENST00000528441 ESCO1Q5FWF5 840 aa13.14□□□□□ -0.31
CMTM1-210ENST00000528441 COL16A1Q07092 1604 aaPredicted RBP13.13□□□□□ -0.31
CMTM1-210ENST00000528441 AHDC1Q5TGY3 1603 aaPredicted RBP13.13□□□□□ -0.31
CMTM1-210ENST00000528441 C1orf167Q5SNV9 1468 aa13.13□□□□□ -0.31
CMTM1-210ENST00000528441 DDX17Q92841 729 aaKnown RBP13.13□□□□□ -0.31
CMTM1-210ENST00000528441 C14orf93Q9H972 538 aaKnown RBP13.13□□□□□ -0.31
CMTM1-210ENST00000528441 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
CMTM1-210ENST00000528441 NEUROD1Q13562 356 aa13.12□□□□□ -0.31
CMTM1-210ENST00000528441 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
CMTM1-210ENST00000528441 TRAK1Q9UPV9 953 aa13.12□□□□□ -0.31
CMTM1-210ENST00000528441 LRRC59Q96AG4 307 aaKnown RBP13.11□□□□□ -0.31
CMTM1-210ENST00000528441 PRAM1Q96QH2 718 aa13.11□□□□□ -0.31
CMTM1-210ENST00000528441 ORAI2Q96SN7 254 aa13.11□□□□□ -0.31
CMTM1-210ENST00000528441 SPATA31A6Q5VVP1 1343 aa13.11□□□□□ -0.31
CMTM1-210ENST00000528441 ABCC11Q96J66 1382 aa13.1□□□□□ -0.31
CMTM1-210ENST00000528441 PLEKHH1Q9ULM0 1364 aa13.1□□□□□ -0.31
CMTM1-210ENST00000528441 CDC42BPGQ6DT37 1551 aa13.1□□□□□ -0.31
CMTM1-210ENST00000528441 NHSL1Q5SYE7 1610 aa13.1□□□□□ -0.31
CMTM1-210ENST00000528441 TECPR2O15040 1411 aa13.09□□□□□ -0.31
CMTM1-210ENST00000528441 SHPRHQ149N8 1683 aa13.08□□□□□ -0.31
CMTM1-210ENST00000528441 PRAG1Q86YV5 1406 aa13.08□□□□□ -0.32
CMTM1-210ENST00000528441 SOCS7O14512 581 aa13.08□□□□□ -0.32
CMTM1-210ENST00000528441 CAPN15O75808 1086 aa13.08□□□□□ -0.32
CMTM1-210ENST00000528441 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
CMTM1-210ENST00000528441 STAC3Q96MF2 364 aa13.08□□□□□ -0.32
CMTM1-210ENST00000528441 NRXN1Q9ULB1 1477 aa13.08□□□□□ -0.32
CMTM1-210ENST00000528441 NPHP3Q7Z494 1330 aa13.08□□□□□ -0.32
CMTM1-210ENST00000528441 HAP1P54257 671 aaPredicted RBP13.07□□□□□ -0.32
CMTM1-210ENST00000528441 XPCQ01831 940 aaPredicted RBP13.07□□□□□ -0.32
CMTM1-210ENST00000528441 TRIM26Q12899 539 aaPredicted RBP13.07□□□□□ -0.32
CMTM1-210ENST00000528441 HIRIP3Q9BW71 556 aaPredicted RBP13.07□□□□□ -0.32
CMTM1-210ENST00000528441 MINK1Q8N4C8 1332 aaPredicted RBP13.07□□□□□ -0.32
CMTM1-210ENST00000528441 LMOD2Q6P5Q4 547 aa13.06□□□□□ -0.32
CMTM1-210ENST00000528441 FOXO3O43524 673 aa13.05□□□□□ -0.32
CMTM1-210ENST00000528441 ADAMTS2O95450 1211 aa13.05□□□□□ -0.32
CMTM1-210ENST00000528441 C8orf37Q96NL8 207 aa13.05□□□□□ -0.32
CMTM1-210ENST00000528441 FMN2Q9NZ56 1722 aa13.05□□□□□ -0.32
CMTM1-210ENST00000528441 SIN3AQ96ST3 1273 aa13.04□□□□□ -0.32
CMTM1-210ENST00000528441 LRP6O75581 1613 aa13.03□□□□□ -0.32
CMTM1-210ENST00000528441 KIF1AQ12756 1690 aa13.03□□□□□ -0.32
CMTM1-210ENST00000528441 ZNF772Q68DY9 489 aaPredicted RBP13.03□□□□□ -0.32
CMTM1-210ENST00000528441 SIRT1Q96EB6 747 aa13.03□□□□□ -0.32
CMTM1-210ENST00000528441 EIF3AQ14152 1382 aaKnown RBP13.03□□□□□ -0.32
CMTM1-210ENST00000528441 DLC1Q96QB1 1528 aa13.03□□□□□ -0.32
CMTM1-210ENST00000528441 PHF8Q9UPP1 1060 aa13.02□□□□□ -0.33
CMTM1-210ENST00000528441 PNPLA6Q8IY17 1366 aa13.02□□□□□ -0.33
CMTM1-210ENST00000528441 PSME1Q06323 249 aa13.01□□□□□ -0.33
CMTM1-210ENST00000528441 PMFBP1Q8TBY8 1022 aa13.01□□□□□ -0.33
CMTM1-210ENST00000528441 NGLY1Q96IV0 654 aa13.01□□□□□ -0.33
CMTM1-210ENST00000528441 ADGRB1O14514 1584 aa13.01□□□□□ -0.33
CMTM1-210ENST00000528441 RGPD8O14715 1765 aaPredicted RBP13.01□□□□□ -0.33
CMTM1-210ENST00000528441 AFF2P51816 1311 aa13□□□□□ -0.33
CMTM1-210ENST00000528441 SOS2Q07890 1332 aaPredicted RBP13□□□□□ -0.33
CMTM1-210ENST00000528441 POTEAQ6S8J7 498 aa13□□□□□ -0.33
CMTM1-210ENST00000528441 KRT28Q7Z3Y7 464 aa13□□□□□ -0.33
CMTM1-210ENST00000528441 RGS17Q9UGC6 210 aaPredicted RBP13□□□□□ -0.33
CMTM1-210ENST00000528441 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
CMTM1-210ENST00000528441 TONSLQ96HA7 1378 aa12.99□□□□□ -0.33
CMTM1-210ENST00000528441 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
CMTM1-210ENST00000528441 L3MBTL2Q969R5 705 aa12.99□□□□□ -0.33
CMTM1-210ENST00000528441 PAK3O75914 559 aaPredicted RBP12.98□□□□□ -0.33
CMTM1-210ENST00000528441 KIAA1210Q9ULL0 1709 aa12.98□□□□□ -0.33
CMTM1-210ENST00000528441 GPRASP1Q5JY77 1395 aa12.97□□□□□ -0.33
CMTM1-210ENST00000528441 WASLO00401 505 aaPredicted RBP12.97□□□□□ -0.33
CMTM1-210ENST00000528441 ZNF219Q9P2Y4 722 aaPredicted RBP12.97□□□□□ -0.33
CMTM1-210ENST00000528441 ROCK2O75116 1388 aaKnown RBP12.96□□□□□ -0.33
CMTM1-210ENST00000528441 ADGRB2O60241 1585 aa12.96□□□□□ -0.33
CMTM1-210ENST00000528441 RXRBP28702 533 aa12.96□□□□□ -0.33
CMTM1-210ENST00000528441 SRPK2P78362 688 aaKnown RBP12.96□□□□□ -0.33
CMTM1-210ENST00000528441 NBPF1Q3BBV0 1214 aa12.96□□□□□ -0.33
CMTM1-210ENST00000528441 PXDNQ92626 1479 aa12.96□□□□□ -0.34
CMTM1-210ENST00000528441 ANKARQ7Z5J8 1434 aa12.96□□□□□ -0.34
CMTM1-210ENST00000528441 TULP4Q9NRJ4 1543 aa12.95□□□□□ -0.34
CMTM1-210ENST00000528441 DSG3P32926 999 aa12.95□□□□□ -0.34
CMTM1-210ENST00000528441 ITSN1Q15811 1721 aa12.95□□□□□ -0.34
CMTM1-210ENST00000528441 CENPJQ9HC77 1338 aaPredicted RBP12.94□□□□□ -0.34
CMTM1-210ENST00000528441 USP21Q9UK80 565 aa12.94□□□□□ -0.34
CMTM1-210ENST00000528441 TNS3Q68CZ2 1445 aa12.94□□□□□ -0.34
CMTM1-210ENST00000528441 CDK19Q9BWU1 502 aa12.93□□□□□ -0.34
CMTM1-210ENST00000528441 PCGF6Q9BYE7 350 aa12.93□□□□□ -0.34
CMTM1-210ENST00000528441 QTRT2Q9H974 415 aaKnown RBP12.93□□□□□ -0.34
CMTM1-210ENST00000528441 SPATA31A3Q5VYP0 1347 aa12.92□□□□□ -0.34
CMTM1-210ENST00000528441 NUDT16Q96DE0 195 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms