RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CGNL1Q0VF96 1302 aa19.68■□□□□ 0.74
ECHDC1-220ENST00000528402 ABCC11Q96J66 1382 aa19.68■□□□□ 0.74
ECHDC1-220ENST00000528402 STK26Q9P289 416 aa19.68■□□□□ 0.74
ECHDC1-220ENST00000528402 NSD3Q9BZ95 1437 aa19.67■□□□□ 0.74
ECHDC1-220ENST00000528402 NLRP1Q9C000 1473 aa19.67■□□□□ 0.74
ECHDC1-220ENST00000528402 PRAM1Q96QH2 718 aa19.66■□□□□ 0.74
ECHDC1-220ENST00000528402 RNF123Q5XPI4 1314 aa19.66■□□□□ 0.74
ECHDC1-220ENST00000528402 POLR3AO14802 1390 aaPredicted RBP19.65■□□□□ 0.74
ECHDC1-220ENST00000528402 SETD1AO15047 1707 aaKnown RBP19.65■□□□□ 0.74
ECHDC1-220ENST00000528402 MORC1Q86VD1 984 aa19.64■□□□□ 0.73
ECHDC1-220ENST00000528402 TERF2IPQ9NYB0 399 aa19.64■□□□□ 0.73
ECHDC1-220ENST00000528402 ADAMTS8Q9UP79 889 aa19.64■□□□□ 0.73
ECHDC1-220ENST00000528402 SRPK2P78362 688 aaKnown RBP19.62■□□□□ 0.73
ECHDC1-220ENST00000528402 UBR1Q8IWV7 1749 aa19.62■□□□□ 0.73
ECHDC1-220ENST00000528402 PPP4R2Q9NY27 417 aa19.62■□□□□ 0.73
ECHDC1-220ENST00000528402 TMEM2Q9UHN6 1383 aa19.62■□□□□ 0.73
ECHDC1-220ENST00000528402 CABP2Q9NPB3 220 aa19.61■□□□□ 0.73
ECHDC1-220ENST00000528402 KNDC1Q76NI1 1749 aa19.6■□□□□ 0.73
ECHDC1-220ENST00000528402 BCANQ96GW7 911 aa19.59■□□□□ 0.73
ECHDC1-220ENST00000528402 NRXN3Q9Y4C0 1643 aa19.59■□□□□ 0.73
ECHDC1-220ENST00000528402 FAM135BQ49AJ0 1406 aa19.59■□□□□ 0.73
ECHDC1-220ENST00000528402 MINK1Q8N4C8 1332 aaPredicted RBP19.58■□□□□ 0.72
ECHDC1-220ENST00000528402 HDGFL2Q7Z4V5 671 aaPredicted RBP19.58■□□□□ 0.72
ECHDC1-220ENST00000528402 CDK19Q9BWU1 502 aa19.58■□□□□ 0.72
ECHDC1-220ENST00000528402 TECPR2O15040 1411 aa19.57■□□□□ 0.72
ECHDC1-220ENST00000528402 TRHP20396 242 aaPredicted RBP19.57■□□□□ 0.72
ECHDC1-220ENST00000528402 SAFB2Q14151 953 aaKnown RBP eCLIP19.57■□□□□ 0.72
ECHDC1-220ENST00000528402 CFAP53Q96M91 514 aa19.57■□□□□ 0.72
ECHDC1-220ENST00000528402 MED14O60244 1454 aa19.57■□□□□ 0.72
ECHDC1-220ENST00000528402 PLEKHG1Q9ULL1 1385 aa19.55■□□□□ 0.72
ECHDC1-220ENST00000528402 FER1L4A9Z1Z3 1794 aa19.54■□□□□ 0.72
ECHDC1-220ENST00000528402 EID1Q9Y6B2 187 aa19.54■□□□□ 0.72
ECHDC1-220ENST00000528402 C3P01024 1663 aa19.53■□□□□ 0.72
ECHDC1-220ENST00000528402 A0A1W2PP64 1363 aa19.53■□□□□ 0.72
ECHDC1-220ENST00000528402 NCBP3Q53F19 620 aaKnown RBP19.52■□□□□ 0.72
ECHDC1-220ENST00000528402 RCAN3Q9UKA8 241 aa19.52■□□□□ 0.72
ECHDC1-220ENST00000528402 ATP7BP35670 1465 aa19.52■□□□□ 0.72
ECHDC1-220ENST00000528402 ANKRD26Q9UPS8 1709 aa19.52■□□□□ 0.71
ECHDC1-220ENST00000528402 METP08581 1390 aa19.51■□□□□ 0.71
ECHDC1-220ENST00000528402 CPS1P31327 1500 aa19.51■□□□□ 0.71
ECHDC1-220ENST00000528402 THEMISQ8N1K5 641 aaPredicted RBP19.51■□□□□ 0.71
ECHDC1-220ENST00000528402 SLIT1O75093 1534 aa19.5■□□□□ 0.71
ECHDC1-220ENST00000528402 WASLO00401 505 aaPredicted RBP19.5■□□□□ 0.71
ECHDC1-220ENST00000528402 SALL2Q9Y467 1007 aaPredicted RBP19.5■□□□□ 0.71
ECHDC1-220ENST00000528402 ZNF521Q96K83 1311 aa19.49■□□□□ 0.71
ECHDC1-220ENST00000528402 ARHGAP23Q9P227 1491 aa19.49■□□□□ 0.71
ECHDC1-220ENST00000528402 IRX6P78412 446 aaPredicted RBP19.49■□□□□ 0.71
ECHDC1-220ENST00000528402 GOLGA2Q08379 1002 aa19.49■□□□□ 0.71
ECHDC1-220ENST00000528402 CD163L1Q9NR16 1453 aa19.48■□□□□ 0.71
ECHDC1-220ENST00000528402 WAPLQ7Z5K2 1190 aa19.48■□□□□ 0.71
ECHDC1-220ENST00000528402 TXNDC2Q86VQ3 553 aa19.48■□□□□ 0.71
ECHDC1-220ENST00000528402 MTHFSP49914 203 aa19.47■□□□□ 0.71
ECHDC1-220ENST00000528402 ADAMTS13Q76LX8 1427 aa19.47■□□□□ 0.71
ECHDC1-220ENST00000528402 CABP1Q9NZU7 370 aa19.47■□□□□ 0.71
ECHDC1-220ENST00000528402 SENP3Q9H4L4 574 aaPredicted RBP19.46■□□□□ 0.71
ECHDC1-220ENST00000528402 FYB1O15117 783 aa19.45■□□□□ 0.7
ECHDC1-220ENST00000528402 RRP1P56182 461 aaKnown RBP19.45■□□□□ 0.7
ECHDC1-220ENST00000528402 RUNDC1Q96C34 613 aa19.45■□□□□ 0.7
ECHDC1-220ENST00000528402 TBX22Q9Y458 520 aa19.45■□□□□ 0.7
ECHDC1-220ENST00000528402 PLEKHH1Q9ULM0 1364 aa19.45■□□□□ 0.7
ECHDC1-220ENST00000528402 CEBPAP49715 358 aaPredicted RBP19.44■□□□□ 0.7
ECHDC1-220ENST00000528402 CDCA7LQ96GN5 454 aa19.44■□□□□ 0.7
ECHDC1-220ENST00000528402 SHPRHQ149N8 1683 aa19.44■□□□□ 0.7
ECHDC1-220ENST00000528402 KIF20BQ96Q89 1820 aa19.43■□□□□ 0.7
ECHDC1-220ENST00000528402 DIP2AQ14689 1571 aa19.43■□□□□ 0.7
ECHDC1-220ENST00000528402 APAF1O14727 1248 aa19.42■□□□□ 0.7
ECHDC1-220ENST00000528402 LTKP29376 864 aa19.42■□□□□ 0.7
ECHDC1-220ENST00000528402 SLFN5Q08AF3 891 aa19.42■□□□□ 0.7
ECHDC1-220ENST00000528402 ZNF692Q9BU19 519 aaPredicted RBP19.42■□□□□ 0.7
ECHDC1-220ENST00000528402 CCDC61Q9Y6R9 512 aa19.42■□□□□ 0.7
ECHDC1-220ENST00000528402 SENP3-EIF4A1A0A087X0R7 540 aa19.42■□□□□ 0.7
ECHDC1-220ENST00000528402 TRMT2AQ8IZ69 625 aaKnown RBP19.42■□□□□ 0.7
ECHDC1-220ENST00000528402 CPSF1Q10570 1443 aaKnown RBP19.41■□□□□ 0.7
ECHDC1-220ENST00000528402 ADGRB2O60241 1585 aa19.41■□□□□ 0.7
ECHDC1-220ENST00000528402 E9PSI1 815 aa19.41■□□□□ 0.7
ECHDC1-220ENST00000528402 TNNT2P45379 298 aaPredicted RBP19.41■□□□□ 0.7
ECHDC1-220ENST00000528402 PNNQ9H307 717 aaKnown RBP19.41■□□□□ 0.7
ECHDC1-220ENST00000528402 EDC4Q6P2E9 1401 aaKnown RBP19.41■□□□□ 0.7
ECHDC1-220ENST00000528402 DUSP27Q5VZP5 1158 aa19.4■□□□□ 0.7
ECHDC1-220ENST00000528402 NUDT16Q96DE0 195 aaKnown RBP19.4■□□□□ 0.7
ECHDC1-220ENST00000528402 PPIP5K1Q6PFW1 1433 aa19.39■□□□□ 0.69
ECHDC1-220ENST00000528402 CCDC27Q2M243 656 aa19.39■□□□□ 0.69
ECHDC1-220ENST00000528402 CCDC146Q8IYE0 955 aa19.39■□□□□ 0.69
ECHDC1-220ENST00000528402 GGNBP2Q9H3C7 697 aa19.39■□□□□ 0.69
ECHDC1-220ENST00000528402 CDC42BPGQ6DT37 1551 aa19.38■□□□□ 0.69
ECHDC1-220ENST00000528402 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.37■□□□□ 0.69
ECHDC1-220ENST00000528402 PIK3R4Q99570 1358 aa19.36■□□□□ 0.69
ECHDC1-220ENST00000528402 WDR63Q8IWG1 891 aa19.36■□□□□ 0.69
ECHDC1-220ENST00000528402 TSHZ2Q9NRE2 1034 aa19.36■□□□□ 0.69
ECHDC1-220ENST00000528402 PNPLA6Q8IY17 1366 aa19.36■□□□□ 0.69
ECHDC1-220ENST00000528402 ROBO2Q9HCK4 1378 aa19.36■□□□□ 0.69
ECHDC1-220ENST00000528402 PTCH1Q13635 1447 aa19.35■□□□□ 0.69
ECHDC1-220ENST00000528402 SETD1BQ9UPS6 1966 aaKnown RBP19.34■□□□□ 0.69
ECHDC1-220ENST00000528402 AKAP12Q02952 1782 aa19.34■□□□□ 0.69
ECHDC1-220ENST00000528402 MON2Q7Z3U7 1717 aa19.34■□□□□ 0.69
ECHDC1-220ENST00000528402 CCDC136Q96JN2 1154 aa19.34■□□□□ 0.69
ECHDC1-220ENST00000528402 PHF23Q9BUL5 403 aaPredicted RBP19.34■□□□□ 0.69
ECHDC1-220ENST00000528402 NKTRP30414 1462 aaKnown RBP19.33■□□□□ 0.68
ECHDC1-220ENST00000528402 PLEKHG3A1L390 1219 aa19.33■□□□□ 0.68
ECHDC1-220ENST00000528402 U2AF1L5P0DN76 240 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms