RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 CDC42BPGQ6DT37 1551 aa25.5■■□□□ 1.67
NXF1-206ENST00000527902 ROBO1Q9Y6N7 1651 aa25.5■■□□□ 1.67
NXF1-206ENST00000527902 RALGAPBQ86X10 1494 aa25.49■■□□□ 1.67
NXF1-206ENST00000527902 SCAF1Q9H7N4 1312 aaKnown RBP25.49■■□□□ 1.67
NXF1-206ENST00000527902 MST1RQ04912 1400 aa25.48■■□□□ 1.67
NXF1-206ENST00000527902 ATF3P18847 181 aa25.48■■□□□ 1.67
NXF1-206ENST00000527902 CADPS2Q86UW7 1296 aa25.48■■□□□ 1.67
NXF1-206ENST00000527902 ROCK2O75116 1388 aaKnown RBP25.47■■□□□ 1.67
NXF1-206ENST00000527902 SAFB2Q14151 953 aaKnown RBP eCLIP25.47■■□□□ 1.67
NXF1-206ENST00000527902 SLAIN2Q9P270 581 aa25.47■■□□□ 1.67
NXF1-206ENST00000527902 GPRASP1Q5JY77 1395 aa25.45■■□□□ 1.67
NXF1-206ENST00000527902 FMN2Q9NZ56 1722 aa25.45■■□□□ 1.66
NXF1-206ENST00000527902 ADGRB2O60241 1585 aa25.44■■□□□ 1.66
NXF1-206ENST00000527902 POGKQ9P215 609 aa25.44■■□□□ 1.66
NXF1-206ENST00000527902 TIMELESSQ9UNS1 1208 aa25.44■■□□□ 1.66
NXF1-206ENST00000527902 QRICH2Q9H0J4 1663 aa25.41■■□□□ 1.66
NXF1-206ENST00000527902 C1orf167Q5SNV9 1468 aa25.4■■□□□ 1.66
NXF1-206ENST00000527902 RGPD8O14715 1765 aaPredicted RBP25.39■■□□□ 1.66
NXF1-206ENST00000527902 MINK1Q8N4C8 1332 aaPredicted RBP25.38■■□□□ 1.65
NXF1-206ENST00000527902 HSPA1LP34931 641 aa25.37■■□□□ 1.65
NXF1-206ENST00000527902 HIRIP3Q9BW71 556 aaPredicted RBP25.37■■□□□ 1.65
NXF1-206ENST00000527902 USP32Q8NFA0 1604 aa25.36■■□□□ 1.65
NXF1-206ENST00000527902 BRINP3Q76B58 766 aa25.35■■□□□ 1.65
NXF1-206ENST00000527902 CARD11Q9BXL7 1154 aa25.35■■□□□ 1.65
NXF1-206ENST00000527902 CENPJQ9HC77 1338 aaPredicted RBP25.34■■□□□ 1.65
NXF1-206ENST00000527902 NUTM2FA1L443 756 aa25.33■■□□□ 1.65
NXF1-206ENST00000527902 PHLPP1O60346 1717 aa25.33■■□□□ 1.65
NXF1-206ENST00000527902 NHSL1Q5SYE7 1610 aa25.33■■□□□ 1.65
NXF1-206ENST00000527902 AHDC1Q5TGY3 1603 aaPredicted RBP25.31■■□□□ 1.64
NXF1-206ENST00000527902 ORAI2Q96SN7 254 aa25.31■■□□□ 1.64
NXF1-206ENST00000527902 COL16A1Q07092 1604 aaPredicted RBP25.29■■□□□ 1.64
NXF1-206ENST00000527902 TULP4Q9NRJ4 1543 aa25.28■■□□□ 1.64
NXF1-206ENST00000527902 WASLO00401 505 aaPredicted RBP25.28■■□□□ 1.64
NXF1-206ENST00000527902 EIF3AQ14152 1382 aaKnown RBP25.28■■□□□ 1.64
NXF1-206ENST00000527902 PRR36Q9H6K5 1346 aa25.26■■□□□ 1.63
NXF1-206ENST00000527902 DDX17Q92841 729 aaKnown RBP25.25■■□□□ 1.63
NXF1-206ENST00000527902 ANKARQ7Z5J8 1434 aa25.25■■□□□ 1.63
NXF1-206ENST00000527902 KIF1AQ12756 1690 aa25.24■■□□□ 1.63
NXF1-206ENST00000527902 ATP7BP35670 1465 aa25.24■■□□□ 1.63
NXF1-206ENST00000527902 ESCO1Q5FWF5 840 aa25.24■■□□□ 1.63
NXF1-206ENST00000527902 CDK19Q9BWU1 502 aa25.23■■□□□ 1.63
NXF1-206ENST00000527902 TOPAZ1Q8N9V7 1692 aa25.23■■□□□ 1.63
NXF1-206ENST00000527902 ITSN1Q15811 1721 aa25.22■■□□□ 1.63
NXF1-206ENST00000527902 USP47Q96K76 1375 aa25.2■■□□□ 1.63
NXF1-206ENST00000527902 SBNO2Q9Y2G9 1366 aa25.19■■□□□ 1.62
NXF1-206ENST00000527902 PXDNQ92626 1479 aa25.16■■□□□ 1.62
NXF1-206ENST00000527902 ST20-MTHFSA0A0A6YYL1 179 aa25.16■■□□□ 1.62
NXF1-206ENST00000527902 NUDT16Q96DE0 195 aaKnown RBP25.16■■□□□ 1.62
NXF1-206ENST00000527902 CABP2Q9NPB3 220 aa25.16■■□□□ 1.62
NXF1-206ENST00000527902 PHF8Q9UPP1 1060 aa25.16■■□□□ 1.62
NXF1-206ENST00000527902 FOXO3O43524 673 aa25.15■■□□□ 1.62
NXF1-206ENST00000527902 TESK2Q96S53 571 aa25.14■■□□□ 1.62
NXF1-206ENST00000527902 SHPRHQ149N8 1683 aa25.13■■□□□ 1.61
NXF1-206ENST00000527902 SOS2Q07890 1332 aaPredicted RBP25.13■■□□□ 1.61
NXF1-206ENST00000527902 SRPK2P78362 688 aaKnown RBP25.13■■□□□ 1.61
NXF1-206ENST00000527902 PMFBP1Q8TBY8 1022 aa25.13■■□□□ 1.61
NXF1-206ENST00000527902 EVC2Q86UK5 1308 aa25.12■■□□□ 1.61
NXF1-206ENST00000527902 XPCQ01831 940 aaPredicted RBP25.12■■□□□ 1.61
NXF1-206ENST00000527902 NPHP3Q7Z494 1330 aa25.12■■□□□ 1.61
NXF1-206ENST00000527902 TRPM3Q9HCF6 1732 aaPredicted RBP25.09■■□□□ 1.61
NXF1-206ENST00000527902 JCADQ9P266 1359 aa25.08■■□□□ 1.61
NXF1-206ENST00000527902 CCDC61Q9Y6R9 512 aa25.08■■□□□ 1.61
NXF1-206ENST00000527902 PPIP5K1Q6PFW1 1433 aa25.07■■□□□ 1.6
NXF1-206ENST00000527902 LRRC59Q96AG4 307 aaKnown RBP25.05■■□□□ 1.6
NXF1-206ENST00000527902 DISP3Q9P2K9 1392 aa25.05■■□□□ 1.6
NXF1-206ENST00000527902 PLEKHG3A1L390 1219 aa25.04■■□□□ 1.6
NXF1-206ENST00000527902 KRT28Q7Z3Y7 464 aa25.04■■□□□ 1.6
NXF1-206ENST00000527902 MED1Q15648 1581 aaPredicted RBP25.04■■□□□ 1.6
NXF1-206ENST00000527902 POLR3AO14802 1390 aaPredicted RBP25.04■■□□□ 1.6
NXF1-206ENST00000527902 PNPLA6Q8IY17 1366 aa25.04■■□□□ 1.6
NXF1-206ENST00000527902 COL22A1Q8NFW1 1626 aaPredicted RBP25.02■■□□□ 1.6
NXF1-206ENST00000527902 NGDNQ8NEJ9 315 aaKnown RBP25.02■■□□□ 1.6
NXF1-206ENST00000527902 ACEP12821 1306 aa25.02■■□□□ 1.6
NXF1-206ENST00000527902 ALS2Q96Q42 1657 aa25.01■■□□□ 1.59
NXF1-206ENST00000527902 AKAP12Q02952 1782 aa25.01■■□□□ 1.59
NXF1-206ENST00000527902 PSME1Q06323 249 aa25.01■■□□□ 1.59
NXF1-206ENST00000527902 CABP1Q9NZU7 370 aa25.01■■□□□ 1.59
NXF1-206ENST00000527902 ATAD2Q6PL18 1390 aa25.01■■□□□ 1.59
NXF1-206ENST00000527902 HSPA5P11021 654 aaKnown RBP25■■□□□ 1.59
NXF1-206ENST00000527902 LRP6O75581 1613 aa25■■□□□ 1.59
NXF1-206ENST00000527902 EIF4G2P78344 907 aaKnown RBP eCLIP24.99■■□□□ 1.59
NXF1-206ENST00000527902 SPATA31A3Q5VYP0 1347 aa24.99■■□□□ 1.59
NXF1-206ENST00000527902 TNS3Q68CZ2 1445 aa24.99■■□□□ 1.59
NXF1-206ENST00000527902 SBNO1A3KN83 1393 aa24.98■■□□□ 1.59
NXF1-206ENST00000527902 SPATA31A6Q5VVP1 1343 aa24.95■■□□□ 1.58
NXF1-206ENST00000527902 TMF1P82094 1093 aa24.95■■□□□ 1.58
NXF1-206ENST00000527902 PUS7Q96PZ0 661 aaKnown RBP24.95■■□□□ 1.58
NXF1-206ENST00000527902 CD163L1Q9NR16 1453 aa24.95■■□□□ 1.58
NXF1-206ENST00000527902 MON2Q7Z3U7 1717 aa24.95■■□□□ 1.58
NXF1-206ENST00000527902 ABCA3Q99758 1704 aa24.95■■□□□ 1.58
NXF1-206ENST00000527902 SLC24A1O60721 1099 aa24.93■■□□□ 1.58
NXF1-206ENST00000527902 MYOM1P52179 1685 aa24.93■■□□□ 1.58
NXF1-206ENST00000527902 NRKQ7Z2Y5 1582 aa24.93■■□□□ 1.58
NXF1-206ENST00000527902 USP6P35125 1406 aa24.92■■□□□ 1.58
NXF1-206ENST00000527902 CPSF1Q10570 1443 aaKnown RBP24.92■■□□□ 1.58
NXF1-206ENST00000527902 CRYBG1Q9Y4K1 1723 aa24.92■■□□□ 1.58
NXF1-206ENST00000527902 SLC12A5Q9H2X9 1139 aa24.91■■□□□ 1.58
NXF1-206ENST00000527902 SSH2Q76I76 1423 aa24.9■■□□□ 1.58
NXF1-206ENST00000527902 NUTM2BA6NNL0 878 aaPredicted RBP24.9■■□□□ 1.58
NXF1-206ENST00000527902 NUTM2EB1AL46 878 aaPredicted RBP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms